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IMGVR_UViG_3300020473_000086-3300020473-Ga0211625_1000100642
Arc-VirIMGVR_UViG_3300020473_000086-3300020473-Ga0211625_1000100642
Identity
- Kingdom:
- archaea
Quality
85.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-163
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.60 | 31.0 | 3.60e-01 | 96.9% | 65.5% |
| 4rngC00 | 1.20.1280.290 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.60 | 29.0 | 3.93e-01 | 89.4% | 88.0% |
| 1sxjD03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.59 | 27.0 | 3.56e-01 | 93.2% | 75.8% |
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.59 | 32.0 | 3.50e-01 | 96.3% | 61.7% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.55 | 33.0 | 3.85e-01 | 91.3% | 82.8% |
| 2elcA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.55 | 20.0 | 2.94e-01 | 91.9% | 73.1% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 32.0 | 3.86e-01 | 93.8% | 88.9% |
| 4bujE03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.51 | 39.0 | 3.49e-01 | 80.1% | 91.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4616546 | 6155.1.1.4 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › MPC | 0.62 | 28.0 | 3.51e-01 | 89.4% | 66.7% |
| 4026853 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.57 | 30.0 | 3.41e-01 | 100.0% | 64.8% |
| 3799681 | 604.5.1.47 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › ATG2_CAD | 0.54 | 31.0 | 3.30e-01 | 100.0% | 62.6% |
| 3631429 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.53 | 32.0 | 3.25e-01 | 98.1% | 58.1% |
| 5049935 | 187.1.1.1 ↗ | alpha arrays › alpha-helical ferredoxin-like › alpha-helical ferredoxin › alpha-helical ferredoxin › Fer4_8 | 0.53 | 30.0 | 3.31e-01 | 98.8% | 65.2% |
| 5054392 | 184.1.1.1 ↗ | alpha arrays › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Nucleoside phosphorylase/phosphoribosyltransferase-N › Glycos_trans_3N | 0.53 | 21.0 | 2.96e-01 | 91.9% | 75.7% |
| 3938350 | 604.1.1.67 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_5 | 0.51 | 31.0 | 3.76e-01 | 98.8% | 92.4% |
| 3785892 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.51 | 35.0 | 3.07e-01 | 92.5% | 46.1% |
| 5035480 | 159.1.2.4 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG-like | 0.51 | 27.0 | 3.19e-01 | 77.0% | 73.6% |
D2
medium
residues 168-230
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wh2A01 | 3.30.1490.40 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain | 0.54 | 34.0 | 3.46e-01 | 98.4% | 63.9% |
| 2m0aA01 | 3.10.20.350 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 44.0 | 4.00e-01 | 100.0% | 89.2% |
| 2hpuA02 | 3.30.70.2050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 34.0 | 3.43e-01 | 98.4% | 65.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4364088 | 3115.4.1.0 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 | 0.70 | 48.0 | 5.53e-01 | 93.7% | 100.0% |
| 5075438 | 304.4.1.29 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg_3 | 0.55 | 47.0 | 4.31e-01 | 100.0% | 89.4% |