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IMGVR_UViG_3300020473_000086-3300020473-Ga0211625_1000100648
Arc-VirIMGVR_UViG_3300020473_000086-3300020473-Ga0211625_1000100648
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-77
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 53.0 | 5.18e-01 | 100.0% | 66.3% |
| 4qucA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.75 | 43.0 | 4.88e-01 | 84.9% | 75.0% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 51.0 | 5.82e-01 | 100.0% | 98.1% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 55.0 | 5.54e-01 | 100.0% | 83.3% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 46.0 | 4.96e-01 | 100.0% | 82.5% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 45.0 | 4.76e-01 | 100.0% | 78.8% |
| 1iy9A02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.66 | 43.0 | 4.92e-01 | 95.9% | 94.2% |
| 4b6mB00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.65 | 56.0 | 5.43e-01 | 100.0% | 84.8% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.65 | 49.0 | 4.58e-01 | 80.8% | 93.4% |
| 1jb3A00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 51.0 | 4.29e-01 | 91.8% | 80.3% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 42.0 | 4.51e-01 | 100.0% | 88.7% |
| 1w4sA00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.60 | 54.0 | 4.30e-01 | 100.0% | 50.0% |
| 1ddgA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 45.0 | 4.03e-01 | 84.9% | 81.6% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 42.0 | 4.53e-01 | 97.3% | 91.5% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 4.31e-01 | 100.0% | 87.3% |
| 1ja1A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 43.0 | 3.76e-01 | 84.9% | 77.9% |
| 4ikbA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 39.0 | 3.30e-01 | 75.3% | 67.4% |
| 8jx6A02 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 48.0 | 4.31e-01 | 98.6% | 100.0% |
| 7qh7701 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.54 | 45.0 | 3.37e-01 | 94.5% | 76.9% |
| 2iw3A05 | 2.40.50.990 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 44.0 | 3.87e-01 | 97.3% | 60.6% |
| 2cdqA03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.53 | 38.0 | 3.65e-01 | 76.7% | 92.9% |
| 1h6hA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.52 | 39.0 | 3.18e-01 | 80.8% | 63.6% |
| 3f1jA00 | 2.70.20.40 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Borna disease virus, matrix protein | 0.52 | 43.0 | 3.60e-01 | 95.9% | 72.1% |
| 1vqqA01 | 3.10.450.100 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › NTF2-like; domain 1 | 0.52 | 44.0 | 3.94e-01 | 97.3% | 92.7% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 47.0 | 4.14e-01 | 100.0% | 75.2% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.51 | 42.0 | 3.28e-01 | 91.8% | 60.4% |
| 4e3eA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 44.0 | 2.84e-01 | 95.9% | 60.4% |
| 1vclA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 40.0 | 3.35e-01 | 91.8% | 65.8% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 39.0 | 3.06e-01 | 86.3% | 52.2% |
| 6lbtA01 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 42.0 | 3.43e-01 | 93.2% | 88.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4158157 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.69 | 47.0 | 5.00e-01 | 100.0% | 80.0% |
| 4028885 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.69 | 47.0 | 5.01e-01 | 100.0% | 80.0% |
| 4037383 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.69 | 47.0 | 4.99e-01 | 100.0% | 80.0% |
| 3306779 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.68 | 47.0 | 4.98e-01 | 100.0% | 80.0% |
| 4213539 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.68 | 47.0 | 4.98e-01 | 100.0% | 80.0% |
| 3608236 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.68 | 47.0 | 4.94e-01 | 100.0% | 80.0% |
| 3700454 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 58.0 | 4.96e-01 | 100.0% | 90.4% |
| 4073608 | 1.1.5.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 | 0.63 | 55.0 | 4.22e-01 | 100.0% | 73.3% |
| 4337719 | 2.3.1.3 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like › NtA | 0.63 | 52.0 | 4.31e-01 | 91.8% | 78.5% |
| 4419948 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.62 | 43.0 | 4.55e-01 | 100.0% | 84.6% |
| 4038269 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.61 | 43.0 | 4.48e-01 | 100.0% | 84.6% |
| 3950208 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.60 | 43.0 | 4.47e-01 | 100.0% | 84.6% |
| 4967940 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.60 | 49.0 | 3.38e-01 | 89.0% | 100.0% |
| 3736916 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 53.0 | 4.12e-01 | 100.0% | 58.1% |
| 4101580 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.59 | 42.0 | 4.38e-01 | 100.0% | 84.6% |
| 3393084 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.59 | 43.0 | 4.24e-01 | 100.0% | 70.0% |
| 3862470 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 47.0 | 4.00e-01 | 100.0% | 52.5% |
| 3798523 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 54.0 | 5.23e-01 | 100.0% | 92.5% |
| 3174822 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.59 | 53.0 | 5.14e-01 | 100.0% | 90.0% |
| 3267804 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 52.0 | 4.69e-01 | 100.0% | 84.0% |
| 3213653 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.58 | 53.0 | 5.15e-01 | 100.0% | 92.5% |
| 3631731 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 52.0 | 4.12e-01 | 100.0% | 54.7% |
| 3698328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 52.0 | 4.54e-01 | 100.0% | 77.3% |
| 3208838 | 4.1.1.20 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH | 0.58 | 52.0 | 4.07e-01 | 100.0% | 52.9% |
| 3916147 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.57 | 47.0 | 3.72e-01 | 91.8% | 91.0% |
| 3931053 | 4.25.1.2 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD | 0.57 | 51.0 | 4.63e-01 | 100.0% | 89.0% |
| 3999482 | 4.1.1.311 ↗ | beta barrels › SH3 › SH3 › SH3 › BRWD_AD | 0.57 | 51.0 | 4.45e-01 | 100.0% | 78.2% |
| 4957055 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 42.0 | 4.24e-01 | 91.8% | 78.7% |
| 3726250 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 49.0 | 3.71e-01 | 100.0% | 57.5% |
| 4017498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 51.0 | 4.28e-01 | 100.0% | 76.3% |
| 3728321 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.55 | 40.0 | 2.77e-01 | 91.8% | 21.5% |
| 3687023 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 48.0 | 4.36e-01 | 100.0% | 81.0% |
| 216641 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.53 | 45.0 | 3.42e-01 | 94.5% | 84.5% |
| 4501781 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 46.0 | 4.19e-01 | 100.0% | 78.0% |
| 3617446 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.52 | 44.0 | 3.91e-01 | 97.3% | 64.8% |
| 3782925 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 44.0 | 4.02e-01 | 97.3% | 70.5% |
| 3936087 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.52 | 42.0 | 2.76e-01 | 89.0% | 41.2% |
| 3796020 | 220.1.1.26 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Vps36_ESCRT-II | 0.52 | 44.0 | 3.69e-01 | 98.6% | 79.3% |
| 3808930 | 5.3.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II | 0.52 | 38.0 | 3.09e-01 | 95.9% | 40.7% |
| 3235792 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 41.0 | 2.69e-01 | 87.7% | 52.9% |
| 3232470 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.51 | 41.0 | 2.73e-01 | 89.0% | 40.0% |
| 3991018 | 708.1.1.16 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › RYYR-CCHC | 0.51 | 40.0 | 3.94e-01 | 97.3% | 80.0% |
| 4259027 | 9.3.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C | 0.51 | 45.0 | 3.82e-01 | 100.0% | 78.0% |
| 3625142 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.03e-01 | 76.7% | 96.3% |
| 3738581 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.50 | 41.0 | 2.74e-01 | 89.0% | 45.1% |