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IMGVR_UViG_3300020473_000086-3300020473-Ga0211625_1000100654
Arc-VirIMGVR_UViG_3300020473_000086-3300020473-Ga0211625_1000100654
Identity
- Kingdom:
- archaea
Quality
81.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-75
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 58.0 | 6.20e-01 | 98.6% | 79.4% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 59.0 | 6.57e-01 | 100.0% | 89.5% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 57.0 | 6.08e-01 | 100.0% | 82.3% |
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 54.0 | 5.88e-01 | 98.6% | 81.4% |
| 4ld6A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 57.0 | 4.77e-01 | 100.0% | 48.7% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 52.0 | 5.91e-01 | 98.6% | 98.1% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 59.0 | 5.78e-01 | 100.0% | 78.7% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.74 | 53.0 | 5.48e-01 | 100.0% | 80.6% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 57.0 | 5.69e-01 | 100.0% | 81.9% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 51.0 | 5.39e-01 | 98.6% | 83.1% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 55.0 | 4.74e-01 | 100.0% | 54.6% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 39.0 | 4.69e-01 | 80.3% | 86.7% |
| 1vq8Q00 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.69 | 54.0 | 4.89e-01 | 100.0% | 62.1% |
| 2yrvA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 51.0 | 4.30e-01 | 100.0% | 50.4% |
| 4c0dB00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.62 | 46.0 | 3.40e-01 | 100.0% | 29.8% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 39.0 | 4.19e-01 | 93.0% | 75.4% |
| 4c0fC00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.61 | 45.0 | 3.95e-01 | 100.0% | 50.9% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 42.0 | 3.65e-01 | 71.8% | 79.3% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 40.0 | 4.13e-01 | 85.9% | 74.6% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 43.0 | 4.36e-01 | 95.8% | 79.7% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.59 | 42.0 | 3.69e-01 | 74.6% | 82.7% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.59 | 44.0 | 4.11e-01 | 85.9% | 63.7% |
| 3grdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 45.0 | 3.79e-01 | 93.0% | 79.5% |
| 2xglA00 | 3.10.450.300 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein | 0.55 | 45.0 | 4.18e-01 | 93.0% | 83.5% |
| 2dixA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 40.0 | 3.92e-01 | 80.3% | 71.8% |
| 6gmhH01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 3.48e-01 | 88.7% | 91.7% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 42.0 | 3.71e-01 | 83.1% | 82.4% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 47.0 | 3.95e-01 | 100.0% | 97.6% |
| 1cbiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 46.0 | 3.79e-01 | 100.0% | 97.1% |
| 4hntA04 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.53 | 42.0 | 3.79e-01 | 87.3% | 86.1% |
| 4b63A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 43.0 | 2.73e-01 | 95.8% | 79.6% |
| 2xgtB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 40.0 | 3.58e-01 | 83.1% | 83.2% |
| 5l37C00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.52 | 34.0 | 3.25e-01 | 80.3% | 54.7% |
| 1tltA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 40.0 | 3.03e-01 | 85.9% | 98.4% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 44.0 | 3.73e-01 | 100.0% | 96.9% |
| 1mknA00 | 2.20.60.10 | Mainly Beta › Single Sheet › Heparin-binding Growth Factor, Midkine; Chain A › Pleiotrophin/Midkine, N-terminal domain | 0.51 | 30.0 | 3.22e-01 | 71.8% | 64.4% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4101502 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.88 | 58.0 | 6.60e-01 | 98.6% | 88.9% |
| 5036498 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.88 | 60.0 | 5.88e-01 | 100.0% | 66.7% |
| 3440094 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.88 | 61.0 | 6.61e-01 | 100.0% | 85.0% |
| 3976834 | 4.1.1.156 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2158 | 0.87 | 53.0 | 6.21e-01 | 97.2% | 88.0% |
| 3328489 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 58.0 | 5.87e-01 | 100.0% | 71.4% |
| 4093836 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 59.0 | 6.38e-01 | 100.0% | 86.7% |
| 3941391 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 52.0 | 5.63e-01 | 94.4% | 75.0% |
| 3485965 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 55.0 | 6.00e-01 | 100.0% | 81.7% |
| 4956443 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 58.0 | 6.31e-01 | 100.0% | 86.7% |
| 4177200 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.82 | 55.0 | 6.18e-01 | 100.0% | 89.1% |
| 3296864 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.82 | 53.0 | 5.72e-01 | 100.0% | 78.3% |
| 5051313 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 59.0 | 6.19e-01 | 100.0% | 83.1% |
| 3470133 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.76 | 62.0 | 5.23e-01 | 100.0% | 54.4% |
| 5001589 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.74 | 58.0 | 5.14e-01 | 100.0% | 59.0% |
| 3750522 | 4.1.1.218 ↗ | beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N | 0.74 | 56.0 | 4.72e-01 | 100.0% | 50.9% |
| 3557649 | 4.8.1.20 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N | 0.73 | 55.0 | 4.78e-01 | 100.0% | 53.3% |
| 3768742 | 4.1.1.355 ↗ | beta barrels › SH3 › SH3 › SH3 › WAC_Acf1_DNA_bd | 0.73 | 57.0 | 3.82e-01 | 100.0% | 22.7% |
| 3791752 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 54.0 | 5.69e-01 | 100.0% | 86.2% |
| 5011500 | 4.1.1.14 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e | 0.73 | 57.0 | 5.04e-01 | 100.0% | 59.0% |
| 3898370 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.73 | 56.0 | 6.17e-01 | 98.6% | 100.0% |
| 3259841 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 61.0 | 6.21e-01 | 100.0% | 92.9% |
| 145843 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.71 | 55.0 | 4.74e-01 | 100.0% | 54.6% |
| 3684646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 54.0 | 5.18e-01 | 100.0% | 73.8% |
| 3953498 | 4.1.1.439 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26205 | 0.66 | 56.0 | 5.58e-01 | 100.0% | 88.0% |
| 3284813 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 57.0 | 5.69e-01 | 100.0% | 94.7% |
| 3967986 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.63 | 50.0 | 4.86e-01 | 100.0% | 76.2% |
| 3593768 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 50.0 | 4.53e-01 | 100.0% | 63.2% |
| 5013360 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.63 | 41.0 | 3.79e-01 | 94.4% | 50.5% |
| 4250402 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 39.0 | 4.60e-01 | 90.1% | 100.0% |
| 4959982 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.61 | 41.0 | 2.93e-01 | 95.8% | 23.9% |
| 3515127 | 4.1.1.280 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4176 | 0.59 | 51.0 | 4.69e-01 | 100.0% | 76.8% |
| 3908446 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.55 | 44.0 | 3.13e-01 | 94.4% | 52.2% |
| 3700132 | 7026.1.1.0 ↗ | beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 | 0.54 | 41.0 | 2.73e-01 | 85.9% | 32.8% |
| 5044388 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 35.0 | 3.81e-01 | 87.3% | 98.0% |
| 3456906 | 216.1.1.5 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › BRE | 0.52 | 45.0 | 3.79e-01 | 94.4% | 80.7% |
| 4167077 | 236.1.1.2 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N,ADH_zinc_N_2 | 0.52 | 44.0 | 3.47e-01 | 98.6% | 96.4% |
| 4064998 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.52 | 44.0 | 3.45e-01 | 98.6% | 88.8% |
| 4583494 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.52 | 45.0 | 3.73e-01 | 100.0% | 93.3% |
| 3937157 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.52 | 42.0 | 4.27e-01 | 93.0% | 92.9% |
| 4086319 | 236.1.1.0 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain | 0.51 | 43.0 | 3.40e-01 | 98.6% | 91.5% |
| 4309167 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.51 | 41.0 | 3.19e-01 | 94.4% | 82.8% |
| 3640675 | 2008.1.1.98 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Pkinase_fungal | 0.51 | 42.0 | 2.81e-01 | 95.8% | 26.2% |
| 3902875 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 35.0 | 3.67e-01 | 83.1% | 80.0% |
| 4387469 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.51 | 40.0 | 3.10e-01 | 93.0% | 89.2% |
| 3249795 | 236.1.1.1 ↗ | beta barrels › GroES-like › GroES-related › Alcohol dehydrogenase-like, N-terminal domain › ADH_N | 0.50 | 41.0 | 3.07e-01 | 94.4% | 81.0% |