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IMGVR_UViG_3300020473_000086-3300020473-Ga0211625_100010068
Arc-VirIMGVR_UViG_3300020473_000086-3300020473-Ga0211625_100010068
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-75
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kw0A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.79 | 69.0 | 5.05e-01 | 94.7% | 46.6% |
| 4h4nA00 | 2.60.40.3750 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 44.0 | 4.83e-01 | 97.3% | 82.3% |
| 4govA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 48.0 | 4.11e-01 | 94.7% | 100.0% |
| 2q7nA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 3.87e-01 | 100.0% | 55.5% |
| 3g3oA00 | 3.20.100.30 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › VTC, catalytic tunnel domain | 0.56 | 48.0 | 3.31e-01 | 98.7% | 45.2% |
| 1vq3B00 | 3.30.1280.10 | Alpha Beta › 2-Layer Sandwich › Mth169; Chain: A , › Phosphoribosylformylglycinamidine synthase subunit PurS | 0.55 | 47.0 | 4.52e-01 | 94.7% | 97.6% |
| 3bgtA01 | 2.40.400.10 | Mainly Beta › Beta Barrel › Acetoacetate decarboxylase-like › Acetoacetate decarboxylase-like | 0.54 | 45.0 | 3.32e-01 | 97.3% | 88.7% |
| 1vwxY00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 40.0 | 3.36e-01 | 80.0% | 63.4% |
| 1x7vA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 46.0 | 4.27e-01 | 96.0% | 99.0% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 46.0 | 4.17e-01 | 96.0% | 98.0% |
| 2efpA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.53 | 44.0 | 4.10e-01 | 93.3% | 82.7% |
| 1h2cA00 | 2.70.20.20 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Matrix protein VP40, N-terminal domain | 0.52 | 45.0 | 3.86e-01 | 97.3% | 96.0% |
| 1vx7G00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.52 | 46.0 | 3.88e-01 | 98.7% | 75.0% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 45.0 | 4.06e-01 | 97.3% | 90.3% |
| 6wubf01 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.51 | 40.0 | 3.76e-01 | 85.3% | 100.0% |
| 2zewB00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 39.0 | 3.19e-01 | 100.0% | 42.9% |
| 4e98C00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 43.0 | 3.90e-01 | 96.0% | 86.7% |
| 3fbqA02 | 2.60.40.1640 | Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. | 0.51 | 40.0 | 3.41e-01 | 90.7% | 100.0% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.77e-01 | 92.0% | 66.7% |
| 4dn9B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 3.93e-01 | 96.0% | 95.9% |
| 4by6C00 | 2.30.30.1020 | Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain | 0.51 | 31.0 | 2.42e-01 | 85.3% | 25.6% |
| 1tr0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 42.0 | 3.83e-01 | 97.3% | 100.0% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028987 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.81 | 72.0 | 5.29e-01 | 94.7% | 45.0% |
| 4009350 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.79 | 69.0 | 4.87e-01 | 96.0% | 33.3% |
| 3388306 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.79 | 69.0 | 5.36e-01 | 96.0% | 50.0% |
| 379641 | 219.1.1.36 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 | 0.79 | 69.0 | 5.01e-01 | 94.7% | 45.6% |
| 4023963 | 219.1.1.37 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C97 | 0.70 | 61.0 | 5.06e-01 | 97.3% | 56.3% |
| 3272992 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.61 | 53.0 | 4.15e-01 | 96.0% | 59.4% |
| 3598607 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.60 | 38.0 | 3.92e-01 | 96.0% | 68.6% |
| 3606147 | 11.2.1.23 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › B9-C2 | 0.59 | 44.0 | 3.29e-01 | 100.0% | 31.3% |
| 4999886 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 48.0 | 3.64e-01 | 100.0% | 55.1% |
| 3722558 | 331.23.1.4 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › CPSF100_C | 0.56 | 29.0 | 2.91e-01 | 76.0% | 43.8% |
| 5062958 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 41.0 | 3.57e-01 | 93.3% | 52.7% |
| 3976897 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.54 | 47.0 | 4.01e-01 | 100.0% | 80.8% |
| 3840408 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.54 | 37.0 | 3.33e-01 | 92.0% | 51.4% |
| 3538381 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 4.13e-01 | 97.3% | 71.2% |
| 4992126 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.53 | 44.0 | 3.54e-01 | 96.0% | 62.5% |
| 3506733 | 11.2.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › YEATS | 0.53 | 47.0 | 3.85e-01 | 100.0% | 84.9% |
| 337395 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.51 | 39.0 | 3.19e-01 | 100.0% | 42.9% |
| 1144826 | 11.1.1.282 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF5643 | 0.51 | 40.0 | 3.41e-01 | 90.7% | 100.0% |
| 3839282 | 11.1.1.449 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2393 | 0.51 | 42.0 | 3.90e-01 | 98.7% | 70.7% |
| 3519988 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 42.0 | 3.72e-01 | 92.0% | 70.9% |
D2
medium
residues 76-157
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x4oA00 | 1.10.10.790 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Surp module | 0.59 | 33.0 | 3.42e-01 | 92.7% | 56.4% |
| 1uyvB02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.50 | 41.0 | 2.96e-01 | 96.3% | 99.7% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3547029 | 148.1.3.221 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › NPHP3_hel | 0.64 | 44.0 | 4.43e-01 | 72.0% | 100.0% |
| 3951292 | 3678.1.1.1 ↗ | alpha arrays › Pilus-presented adhesin helical insertion domain › Pilus-presented adhesin helical insertion domain › Pilus-presented adhesin helical insertion domain › TED | 0.59 | 42.0 | 3.30e-01 | 76.8% | 36.8% |
| 5053184 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.57 | 35.0 | 2.57e-01 | 85.4% | 20.9% |
| 4530585 | 5069.1.3.121 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › IspA | 0.52 | 37.0 | 3.46e-01 | 78.0% | 87.0% |