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IMGVR_UViG_3300021045_000138-3300021045-Ga0214976_10041849
Arc-VirIMGVR_UViG_3300021045_000138-3300021045-Ga0214976_10041849
Identity
- Kingdom:
- archaea
Quality
90.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 12-89
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26457.2 best | DUF8136 | 43.7 | 2.60e-11 | 82.0% | 96.9% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6cgaC02 | 1.20.58.860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 61.0 | 6.19e-01 | 93.6% | 94.9% |
| 3a8tA02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.64 | 52.0 | 4.63e-01 | 89.7% | 67.6% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4260426 | 3718.1.1.1 ↗ | alpha bundles › Flagellar protein fliT › Flagellar protein fliT › Flagellar protein fliT › FliT | 0.74 | 67.0 | 6.18e-01 | 100.0% | 79.0% |
| 3418497 | 633.3.1.1 ↗ | alpha bundles › Bromodomain-like › Mob1/phocein › Mob1/phocein › Mob1_phocein | 0.74 | 56.0 | 4.74e-01 | 79.5% | 68.8% |
| 3951222 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.73 | 59.0 | 6.13e-01 | 91.0% | 98.6% |
| 5081366 | 601.33.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain | 0.67 | 56.0 | 4.43e-01 | 94.9% | 43.6% |
| 3694219 | 616.1.1.23 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › PF28719 | 0.65 | 47.0 | 4.45e-01 | 74.4% | 86.7% |
| 4014047 | 103.9.1.0 ↗ | alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain | 0.64 | 57.0 | 5.04e-01 | 93.6% | 72.4% |
| 4025834 | 650.1.1.1 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ | 0.63 | 44.0 | 4.20e-01 | 73.1% | 70.0% |
| 4997918 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.59 | 44.0 | 2.92e-01 | 78.2% | 23.3% |
| 3966901 | 1008.1.1.115 ↗ | alpha bundles › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BRCC36 C-terminal helical domain › BMFP | 0.53 | 42.0 | 4.18e-01 | 98.7% | 85.9% |