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IMGVR_UViG_3300021084_000461-3300021084-Ga0206678_100132133

Arc-Vir

IMGVR_UViG_3300021084_000461-3300021084-Ga0206678_100132133

Quality

88.4 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-176
PDB
Domain cluster: representative
CATH (21)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3w42A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.87 69.0 6.61e-01 100.0% 71.9%
3zt9A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.87 68.0 6.60e-01 100.0% 74.0%
3ke6B01 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.85 69.0 6.35e-01 100.0% 67.0%
3pu9A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.80 65.0 5.84e-01 99.4% 63.0%
4jndA02 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.79 76.0 6.35e-01 100.0% 73.7%
2i44B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.79 75.0 6.03e-01 100.0% 76.9%
2j82A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.78 71.0 6.47e-01 98.9% 75.6%
3f79E00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.77 65.0 5.76e-01 99.4% 64.4%
3rnrB00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.77 65.0 6.11e-01 87.5% 74.9%
5f1mA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.76 72.0 6.26e-01 99.4% 96.1%
2pnqA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.76 72.0 5.46e-01 100.0% 76.4%
2i0oA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.76 72.0 6.00e-01 100.0% 74.2%
4yzgA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.75 71.0 5.84e-01 98.9% 78.9%
3d8kD00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.75 69.0 5.39e-01 96.6% 67.3%
2pk0A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.75 71.0 6.24e-01 99.4% 75.3%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.72 25.0 4.38e-01 78.4% 98.2%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 36.0 3.85e-01 86.9% 60.7%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.58 36.0 3.93e-01 100.0% 74.5%
2oojA00 2.40.350.10 Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like 0.57 31.0 3.57e-01 93.2% 69.5%
2zf3C00 2.50.20.30 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.51 30.0 3.04e-01 100.0% 56.6%
3g9kF01 3.60.20.40 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Gamma-glutamyltranspeptidase, small (S) subunit 0.50 42.0 4.34e-01 94.9% 94.5%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4024765 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.93 79.0 7.05e-01 98.9% 66.1%
3327078 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.92 83.0 7.03e-01 99.4% 62.8%
None 0.92 80.0 6.93e-01 98.9% 63.3%
3445809 210.2.1.3 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 0.91 80.0 6.93e-01 99.4% 63.5%
3463663 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.91 80.0 6.91e-01 99.4% 63.2%
3272766 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.91 80.0 6.88e-01 98.9% 62.4%
3270083 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.91 78.0 6.85e-01 98.9% 64.7%
3305193 210.2.1.3 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 0.91 80.0 6.89e-01 99.4% 62.7%
3380827 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.90 81.0 6.95e-01 99.4% 64.0%
4939307 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.89 68.0 6.60e-01 97.7% 72.5%
1140542 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.87 69.0 6.61e-01 100.0% 71.9%
3504720 210.2.1.3 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 0.87 84.0 6.89e-01 99.4% 67.3%
3740142 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.87 84.0 6.93e-01 99.4% 65.6%
3472808 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.86 84.0 6.91e-01 99.4% 65.7%
4174454 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.86 84.0 6.76e-01 100.0% 63.8%
None 0.86 83.0 6.97e-01 98.9% 67.0%
4650177 210.2.1.3 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 0.86 83.0 6.81e-01 99.4% 67.5%
4462528 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.86 83.0 6.92e-01 99.4% 66.2%
3956289 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.85 69.0 6.01e-01 100.0% 59.2%
3302707 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.84 81.0 6.92e-01 99.4% 69.2%
4029059 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.84 81.0 6.23e-01 99.4% 68.7%
3284364 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.81 68.0 6.02e-01 100.0% 63.7%
4952188 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.80 67.0 6.07e-01 100.0% 67.1%
4243030 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.80 68.0 5.86e-01 100.0% 60.5%
141810 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.80 65.0 5.83e-01 99.4% 62.7%
4547628 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.80 65.0 5.96e-01 100.0% 66.2%
1031158 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.80 76.0 5.63e-01 100.0% 81.6%
None 0.80 75.0 6.31e-01 99.4% 64.2%
3687813 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.79 76.0 6.12e-01 100.0% 79.9%
3276151 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.79 76.0 5.96e-01 100.0% 57.2%
4024909 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.79 75.0 6.02e-01 100.0% 73.4%
4024886 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.79 75.0 5.72e-01 100.0% 71.6%
3656089 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.79 75.0 5.97e-01 100.0% 73.8%
3523136 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.78 74.0 5.91e-01 99.4% 64.7%
5037842 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.78 74.0 6.25e-01 100.0% 73.5%
4012673 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.78 74.0 5.59e-01 100.0% 70.0%
3174167 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.78 74.0 5.76e-01 99.4% 62.1%
143693 210.2.1.3 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 0.77 65.0 6.16e-01 87.5% 76.7%
3271973 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.77 73.0 6.17e-01 100.0% 72.3%
3973889 210.2.1.2 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE 0.77 66.0 5.80e-01 100.0% 63.1%
4876615 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.77 73.0 5.67e-01 99.4% 73.9%
3717542 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.77 74.0 5.71e-01 100.0% 55.1%
3781274 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.77 74.0 5.48e-01 100.0% 68.1%
3193127 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.76 73.0 5.39e-01 100.0% 70.4%
4030146 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.76 70.0 5.99e-01 96.6% 78.5%
2521871 210.2.1.3 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 0.76 72.0 6.22e-01 99.4% 94.9%
3278265 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.76 72.0 6.40e-01 100.0% 73.8%
3494902 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.75 72.0 5.27e-01 100.0% 95.7%
3709636 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.75 72.0 5.93e-01 100.0% 71.4%
3595939 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.75 71.0 5.87e-01 100.0% 66.8%
3599175 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.75 71.0 5.84e-01 99.4% 67.8%
3292078 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.75 71.0 5.75e-01 100.0% 78.0%
2475381 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.68 62.0 5.82e-01 100.0% 80.9%
3817498 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.63 32.0 3.44e-01 96.0% 55.6%
3741673 210.1.4.1 a+b four layers › Ntn/PP2C › Ntn › (Glycosyl)asparaginase › Asparaginase_2 0.61 56.0 4.45e-01 97.7% 75.9%
3595544 5084.5.1.0 beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.61 34.0 2.90e-01 96.6% 33.2%
3874376 897.1.1.1 a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.57 35.0 3.35e-01 97.7% 51.9%
3574350 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.54 48.0 4.35e-01 93.8% 100.0%
3817811 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 23.0 3.18e-01 79.0% 78.8%
D2 medium residues 177-269
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jqtA00 1.20.1280.40 Mainly Alpha › Up-down Bundle › Monooxygenase › HHA 0.58 29.0 3.54e-01 71.0% 75.4%
2khmA01 1.10.10.1350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain 0.52 38.0 3.66e-01 90.3% 66.7%
7lb8B01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.51 41.0 2.92e-01 89.2% 57.4%
3iu0A00 3.90.1360.10 Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase 0.51 44.0 3.07e-01 100.0% 91.5%
3mw6B00 1.10.1710.10 Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain 0.51 34.0 3.45e-01 73.1% 68.1%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3296163 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.88 72.0 5.28e-01 100.0% 35.9%
4001015 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.86 71.0 4.97e-01 100.0% 30.8%
None 0.85 70.0 4.88e-01 98.9% 29.6%
4973639 210.2.1.3 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 0.85 52.0 4.09e-01 100.0% 32.8%
3504720 210.2.1.3 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C_2 0.85 73.0 4.97e-01 100.0% 29.6%
3740142 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.79 70.0 4.88e-01 100.0% 31.5%
3394135 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.59 33.0 3.43e-01 78.5% 56.7%
3667102 148.1.3.205 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_At3g28540 0.56 40.0 4.45e-01 82.8% 93.3%