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IMGVR_UViG_3300021254_003127-3300021254-Ga0223824_1000558815
Arc-VirIMGVR_UViG_3300021254_003127-3300021254-Ga0223824_1000558815
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-78
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1azsA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.66 | 55.0 | 3.87e-01 | 94.8% | 37.9% |
| 1lnwF01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 51.0 | 4.03e-01 | 86.2% | 82.3% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 43.0 | 3.71e-01 | 70.7% | 87.4% |
| 4fymF00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 56.0 | 3.85e-01 | 100.0% | 45.5% |
| 5zyrA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 3.75e-01 | 87.9% | 66.9% |
| 7dklA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 49.0 | 4.04e-01 | 87.9% | 45.6% |
| 7l9pK01 | 3.30.900.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain | 0.63 | 44.0 | 3.54e-01 | 75.9% | 42.9% |
| 5oyhD00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.63 | 57.0 | 3.94e-01 | 100.0% | 68.6% |
| 3dgpA00 | 3.30.70.2610 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 45.0 | 4.42e-01 | 75.9% | 75.8% |
| 6h9dA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.61 | 50.0 | 3.78e-01 | 93.1% | 50.7% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.61 | 48.0 | 3.56e-01 | 87.9% | 74.4% |
| 2rdpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 46.0 | 3.63e-01 | 87.9% | 78.6% |
| 1i5pA02 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.61 | 51.0 | 3.36e-01 | 93.1% | 31.2% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.60 | 43.0 | 4.16e-01 | 79.3% | 67.2% |
| 1u8vB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.60 | 49.0 | 3.34e-01 | 91.4% | 71.8% |
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 47.0 | 3.08e-01 | 89.7% | 71.4% |
| 3te6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.59 | 49.0 | 3.95e-01 | 100.0% | 47.3% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.59 | 51.0 | 4.36e-01 | 96.6% | 72.3% |
| 3euhC02 | 1.10.10.2260 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain | 0.59 | 47.0 | 3.86e-01 | 87.9% | 51.9% |
| 6qv3A05 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 43.0 | 3.77e-01 | 82.8% | 98.9% |
| 7r2xA01 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.57 | 42.0 | 2.63e-01 | 81.0% | 49.9% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.57 | 43.0 | 3.80e-01 | 86.2% | 58.5% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.56 | 49.0 | 4.19e-01 | 98.3% | 83.2% |
| 5tjjA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 34.0 | 3.20e-01 | 74.1% | 47.9% |
| 7r0kA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.56 | 47.0 | 3.50e-01 | 100.0% | 97.0% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.56 | 39.0 | 3.70e-01 | 75.9% | 62.3% |
| 2looA02 | 1.10.10.1740 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Transmembrane protein 14-like | 0.56 | 39.0 | 3.66e-01 | 100.0% | 58.7% |
| 4gcvC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 39.0 | 3.10e-01 | 81.0% | 58.9% |
| 4fxxB01 | 6.10.140.1790 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 40.0 | 3.72e-01 | 81.0% | 73.6% |
| 2ek5B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 41.0 | 3.42e-01 | 89.7% | 90.8% |
| 1rkbA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 43.0 | 3.18e-01 | 100.0% | 39.3% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3244401 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.68 | 49.0 | 3.93e-01 | 77.6% | 74.8% |
| 4319999 | 101.1.2.111 ↗ | alpha arrays › HTH › HTH › winged helix domain › RQC | 0.67 | 46.0 | 3.89e-01 | 70.7% | 98.9% |
| 3661482 | 4120.1.1.56 ↗ | few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP › Myb_DNA-bind_3 | 0.67 | 53.0 | 4.80e-01 | 87.9% | 68.8% |
| 4420420 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 52.0 | 4.45e-01 | 84.5% | 96.7% |
| 3741490 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 49.0 | 4.41e-01 | 82.8% | 95.3% |
| 5000899 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.65 | 58.0 | 3.83e-01 | 100.0% | 39.6% |
| 4468068 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.64 | 44.0 | 3.67e-01 | 70.7% | 75.0% |
| 4014086 | 109.4.1.777 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 54.0 | 3.32e-01 | 93.1% | 16.6% |
| 4672682 | 101.1.2.27 ↗ | alpha arrays › HTH › HTH › winged helix domain › LexA_DNA_bind | 0.64 | 43.0 | 3.63e-01 | 70.7% | 75.0% |
| 4596757 | 101.1.2.89 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR | 0.63 | 43.0 | 3.61e-01 | 70.7% | 76.0% |
| 3174371 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.63 | 52.0 | 3.47e-01 | 93.1% | 87.1% |
| 3582740 | 5001.1.1.7 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Frizzled | 0.62 | 52.0 | 3.59e-01 | 96.6% | 36.8% |
| 4258325 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 42.0 | 3.47e-01 | 70.7% | 69.1% |
| 5023989 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.62 | 45.0 | 3.63e-01 | 77.6% | 41.6% |
| 4364450 | 101.1.2.46 ↗ | alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg | 0.62 | 42.0 | 3.20e-01 | 70.7% | 54.3% |
| 3516486 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.62 | 42.0 | 3.65e-01 | 70.7% | 68.9% |
| 4129764 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.61 | 42.0 | 3.83e-01 | 70.7% | 95.0% |
| 5046185 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.61 | 52.0 | 3.07e-01 | 100.0% | 37.7% |
| 4098825 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 42.0 | 3.63e-01 | 70.7% | 83.3% |
| 3183367 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.61 | 53.0 | 3.36e-01 | 94.8% | 32.2% |
| 3392905 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.61 | 49.0 | 3.94e-01 | 86.2% | 64.8% |
| 4411875 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 42.0 | 3.22e-01 | 70.7% | 55.6% |
| 3268630 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 41.0 | 3.53e-01 | 82.8% | 44.2% |
| 5064906 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.60 | 42.0 | 4.36e-01 | 77.6% | 80.0% |
| 3432362 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.60 | 48.0 | 3.79e-01 | 89.7% | 84.0% |
| 3387117 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.59 | 41.0 | 3.76e-01 | 74.1% | 85.0% |
| 3601887 | 298.1.1.0 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 0.59 | 41.0 | 2.65e-01 | 74.1% | 97.3% |
| 4017591 | 101.1.2.520 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7779 | 0.58 | 39.0 | 3.58e-01 | 70.7% | 90.0% |
| 5001454 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 41.0 | 3.88e-01 | 79.3% | 70.7% |
| 3357520 | 310.2.1.28 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Myb_DNA-bind_3 | 0.57 | 47.0 | 4.17e-01 | 93.1% | 91.8% |
| 3710958 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.57 | 44.0 | 3.77e-01 | 100.0% | 52.6% |
| 4864568 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.56 | 45.0 | 3.68e-01 | 87.9% | 93.4% |
| 3693546 | 101.1.2.178 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_61 | 0.56 | 47.0 | 3.88e-01 | 94.8% | 84.8% |
| 4013939 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 46.0 | 3.33e-01 | 93.1% | 84.8% |
| 3315625 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 47.0 | 3.45e-01 | 94.8% | 54.8% |
| 3371657 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.55 | 44.0 | 3.80e-01 | 87.9% | 86.7% |
| 3491271 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.55 | 37.0 | 3.34e-01 | 70.7% | 85.9% |
| 3456829 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 46.0 | 3.82e-01 | 94.8% | 78.1% |
| 3478717 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.54 | 42.0 | 3.50e-01 | 89.7% | 87.0% |
| 3650038 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.54 | 46.0 | 3.49e-01 | 93.1% | 88.1% |
| 3641227 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 40.0 | 3.77e-01 | 87.9% | 65.3% |
| 4933236 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 37.0 | 3.10e-01 | 74.1% | 90.9% |
| 4950846 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.54 | 36.0 | 3.85e-01 | 74.1% | 84.0% |
| 3645693 | 101.1.2.516 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25895 | 0.53 | 38.0 | 3.23e-01 | 77.6% | 45.0% |
| 3652381 | 101.1.2.392 ↗ | alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH | 0.53 | 41.0 | 3.41e-01 | 89.7% | 87.0% |
| 3224878 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.53 | 35.0 | 3.17e-01 | 70.7% | 78.9% |
| 4575225 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 42.0 | 3.63e-01 | 100.0% | 89.1% |
| 3652603 | 101.1.2.516 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25895 | 0.53 | 38.0 | 3.20e-01 | 79.3% | 41.8% |
| None | — | 0.52 | 44.0 | 3.60e-01 | 94.8% | 91.8% | |
| 3297063 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 44.0 | 3.72e-01 | 94.8% | 84.0% |
| 3832037 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 43.0 | 2.81e-01 | 94.8% | 28.9% |
| 4015273 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.51 | 35.0 | 3.10e-01 | 74.1% | 45.3% |
| 4022653 | 101.1.2.520 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7779 | 0.51 | 37.0 | 3.23e-01 | 86.2% | 52.4% |
| 4025439 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.51 | 42.0 | 3.25e-01 | 98.3% | 50.3% |
| 3384684 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 42.0 | 3.77e-01 | 94.8% | 94.1% |
| 3450793 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.50 | 42.0 | 3.23e-01 | 94.8% | 57.9% |
D2
medium
residues 79-164
Domain cluster:
representative
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xzmE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.80 | 56.0 | 5.02e-01 | 79.1% | 53.4% |
| 2vqeE01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.80 | 55.0 | 6.36e-01 | 77.9% | 95.3% |
| 1h2iA01 | 3.30.390.80 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › DNA repair protein Rad52/59/22 | 0.75 | 65.0 | 5.37e-01 | 93.0% | 56.8% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.71 | 45.0 | 3.55e-01 | 77.9% | 31.8% |
| 3gocA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.71 | 52.0 | 3.79e-01 | 79.1% | 29.4% |
| 3ga2A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.68 | 51.0 | 3.68e-01 | 79.1% | 29.2% |
| 2w35A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.68 | 50.0 | 3.63e-01 | 79.1% | 29.6% |
| 4kwyA00 | 3.30.160.150 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Lipoprotein like domain | 0.67 | 53.0 | 4.55e-01 | 86.0% | 68.6% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.66 | 41.0 | 3.39e-01 | 77.9% | 35.1% |
| 1tu1A00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.66 | 40.0 | 3.39e-01 | 77.9% | 36.8% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 43.0 | 3.77e-01 | 74.4% | 45.5% |
| 2iqiB00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.64 | 49.0 | 3.96e-01 | 82.6% | 47.4% |
| 3ddvB01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.64 | 50.0 | 4.27e-01 | 83.7% | 100.0% |
| 3hfiA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.64 | 50.0 | 4.26e-01 | 83.7% | 100.0% |
| 3cnvA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.62 | 51.0 | 4.19e-01 | 88.4% | 92.3% |
| 2gxfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 37.0 | 3.40e-01 | 76.7% | 44.9% |
| 1yeyA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.60 | 51.0 | 4.51e-01 | 93.0% | 100.0% |
| 1gydB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 40.0 | 2.74e-01 | 76.7% | 19.0% |
| 1uv4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 43.0 | 2.96e-01 | 76.7% | 23.0% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 39.0 | 3.57e-01 | 82.6% | 50.0% |
| 4ckbD03 | 2.40.50.830 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 47.0 | 4.09e-01 | 89.5% | 94.8% |
| 2joxA00 | 2.60.40.4240 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill | 0.58 | 39.0 | 3.68e-01 | 100.0% | 56.6% |
| 1f49A05 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.58 | 51.0 | 3.57e-01 | 100.0% | 69.7% |
| 2rgqB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 42.0 | 3.65e-01 | 81.4% | 51.1% |
| 3hpcX00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.56 | 43.0 | 3.56e-01 | 82.6% | 76.8% |
| 4jhmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 47.0 | 4.35e-01 | 100.0% | 81.2% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 34.0 | 3.24e-01 | 97.7% | 50.5% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 38.0 | 3.39e-01 | 76.7% | 50.4% |
| 3ke7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 35.0 | 3.13e-01 | 77.9% | 43.6% |
| 6hswA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 3.06e-01 | 100.0% | 77.5% |
| 2oggA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.53 | 48.0 | 4.11e-01 | 100.0% | 85.8% |
| 2jq5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 34.0 | 3.04e-01 | 73.3% | 43.8% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.53 | 44.0 | 3.69e-01 | 93.0% | 82.6% |
| 4ibnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 45.0 | 3.52e-01 | 96.5% | 61.7% |
| 2p19A01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 48.0 | 4.16e-01 | 100.0% | 88.5% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 3.11e-01 | 80.2% | 45.4% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 38.0 | 3.41e-01 | 83.7% | 54.0% |
| 3ebtA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 37.0 | 3.34e-01 | 82.6% | 51.1% |
| 3b7kC02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 36.0 | 3.41e-01 | 74.4% | 97.3% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.20e-01 | 77.9% | 49.2% |
| 3iq2A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.51 | 43.0 | 3.92e-01 | 97.7% | 88.6% |
| 4gb5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 40.0 | 3.36e-01 | 86.0% | 52.7% |
| 5ig0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 36.0 | 3.21e-01 | 77.9% | 48.9% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 44.0 | 4.21e-01 | 98.8% | 82.7% |
| 3o6uC00 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.50 | 38.0 | 3.47e-01 | 82.6% | 60.5% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3942438 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.80 | 51.0 | 4.64e-01 | 76.7% | 50.9% |
| 4785124 | 3274.1.1.1 ↗ | extended segments › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › N-terminal region in 40S ribosomal protein rpS2 (S5p) › Ribosomal_S5 | 0.80 | 54.0 | 6.05e-01 | 75.6% | 88.2% |
| 4018556 | 330.1.1.4 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Rad52_Rad22 | 0.75 | 65.0 | 5.22e-01 | 93.0% | 53.8% |
| 4542063 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.74 | 56.0 | 4.91e-01 | 86.0% | 55.2% |
| 4938778 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.73 | 55.0 | 3.98e-01 | 79.1% | 31.6% |
| 4987631 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.72 | 52.0 | 3.89e-01 | 79.1% | 31.9% |
| 4986671 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.72 | 52.0 | 3.80e-01 | 79.1% | 29.5% |
| 3280381 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.72 | 47.0 | 3.87e-01 | 76.7% | 39.9% |
| 150440 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.71 | 45.0 | 3.58e-01 | 77.9% | 32.7% |
| 4150901 | 330.10.1.0 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain | 0.71 | 55.0 | 4.54e-01 | 81.4% | 51.7% |
| 4456410 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.69 | 51.0 | 3.73e-01 | 79.1% | 29.0% |
| 3820010 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.68 | 42.0 | 3.40e-01 | 77.9% | 33.1% |
| 4331578 | 243.3.1.5 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP | 0.68 | 43.0 | 4.04e-01 | 82.6% | 52.4% |
| 3372466 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 48.0 | 5.05e-01 | 82.6% | 85.3% |
| 3164281 | 5069.1.1.92 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › CcmF_C | 0.67 | 48.0 | 4.61e-01 | 96.5% | 65.0% |
| 4934997 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.66 | 51.0 | 4.55e-01 | 81.4% | 68.3% |
| 3445028 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.66 | 50.0 | 5.21e-01 | 82.6% | 87.5% |
| 3818565 | 881.1.1.1 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PsbP | 0.64 | 41.0 | 3.35e-01 | 77.9% | 35.5% |
| 2573956 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.64 | 47.0 | 4.26e-01 | 79.1% | 66.9% |
| 3229203 | 2484.1.1.50 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT | 0.64 | 45.0 | 2.86e-01 | 76.7% | 13.7% |
| 3609908 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.63 | 49.0 | 4.54e-01 | 82.6% | 70.9% |
| 5079630 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.63 | 47.0 | 3.63e-01 | 79.1% | 41.0% |
| 5012340 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.63 | 46.0 | 3.52e-01 | 79.1% | 38.6% |
| 3809146 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.62 | 38.0 | 3.75e-01 | 77.9% | 57.8% |
| 5951 | 814.1.1.3 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA | 0.62 | 51.0 | 4.32e-01 | 90.7% | 97.2% |
| 3451695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 47.0 | 4.69e-01 | 82.6% | 82.2% |
| 3494784 | 5.1.4.265 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_1st | 0.61 | 42.0 | 2.67e-01 | 97.7% | 14.9% |
| 3183994 | 3385.1.1.2 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 › PF27986 | 0.61 | 43.0 | 4.42e-01 | 96.5% | 77.4% |
| 4500806 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.60 | 54.0 | 3.69e-01 | 100.0% | 67.3% |
| 4088781 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.59 | 45.0 | 3.54e-01 | 96.5% | 38.3% |
| 3372861 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.59 | 48.0 | 4.28e-01 | 87.2% | 88.3% |
| 4403418 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.59 | 53.0 | 3.67e-01 | 100.0% | 68.4% |
| 4927976 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.59 | 38.0 | 3.33e-01 | 76.7% | 44.0% |
| 3704272 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.59 | 35.0 | 2.32e-01 | 87.2% | 14.9% |
| 4177430 | 7520.1.1.1 ↗ | a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like › CinA | 0.59 | 43.0 | 3.62e-01 | 82.6% | 44.7% |
| 4172504 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.58 | 52.0 | 3.58e-01 | 100.0% | 67.1% |
| 3238125 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 40.0 | 2.49e-01 | 76.7% | 12.4% |
| 4202460 | 243.3.1.5 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP | 0.58 | 37.0 | 3.67e-01 | 79.1% | 61.1% |
| 1933307 | 9.13.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like › AOC_like | 0.58 | 49.0 | 4.36e-01 | 94.2% | 81.3% |
| 6400 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.57 | 38.0 | 3.45e-01 | 76.7% | 50.0% |
| 3714021 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.56 | 40.0 | 2.55e-01 | 76.7% | 15.2% |
| 4660347 | 12.3.1.6 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N | 0.56 | 50.0 | 3.45e-01 | 100.0% | 68.5% |
| 4990431 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.56 | 51.0 | 3.76e-01 | 100.0% | 83.2% |
| 4955214 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.55 | 47.0 | 3.23e-01 | 100.0% | 32.8% |
| 4951451 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.55 | 41.0 | 3.58e-01 | 98.8% | 49.7% |
| 3938215 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.54 | 35.0 | 3.07e-01 | 77.9% | 40.3% |
| 4059480 | 881.1.1.37 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 | 0.54 | 43.0 | 3.46e-01 | 89.5% | 42.3% |
| 3236685 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 33.0 | 3.00e-01 | 97.7% | 44.3% |
| 2132960 | 2.2.1.4 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Pertussis_S2S3 | 0.54 | 48.0 | 4.35e-01 | 97.7% | 78.3% |
| 5029448 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 47.0 | 3.88e-01 | 100.0% | 75.0% |
| 3244404 | 243.1.1.28 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 | 0.53 | 34.0 | 3.12e-01 | 77.9% | 46.3% |
| 4011330 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.53 | 35.0 | 3.08e-01 | 77.9% | 43.0% |
| 3470047 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.52 | 34.0 | 3.48e-01 | 77.9% | 67.1% |
| 4991720 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.52 | 43.0 | 3.89e-01 | 93.0% | 79.2% |
| 5062234 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.51 | 42.0 | 3.81e-01 | 100.0% | 65.0% |
| 3827592 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.51 | 44.0 | 3.62e-01 | 95.3% | 55.1% |
| 4672378 | 71.1.1.1 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Ependymin | 0.51 | 36.0 | 2.88e-01 | 77.9% | 34.6% |
| 3251351 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.51 | 35.0 | 3.21e-01 | 77.9% | 52.5% |
| 5047088 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.50 | 41.0 | 3.10e-01 | 100.0% | 35.9% |
| 3632358 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.50 | 39.0 | 3.52e-01 | 100.0% | 58.5% |
| 3225806 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 38.0 | 3.47e-01 | 83.7% | 78.3% |