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IMGVR_UViG_3300021255_003095-3300021255-Ga0223825_1010595135
Arc-VirIMGVR_UViG_3300021255_003095-3300021255-Ga0223825_1010595135
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-109
D2
high
residues 423-536
Domain cluster:
rep: IMGVR_UViG_2791355014_000001-2791355014-2792331249__D435-524
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.81 | 48.0 | 5.76e-01 | 100.0% | 87.2% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 46.0 | 4.97e-01 | 99.1% | 71.9% |
| 2zj2A03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 42.0 | 4.82e-01 | 100.0% | 81.0% |
| 3u5ei01 | 1.10.10.1760 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 | 0.64 | 28.0 | 3.51e-01 | 81.6% | 67.2% |
| 3euhC02 | 1.10.10.2260 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MukE-like family, C-terminal domain | 0.64 | 49.0 | 5.05e-01 | 100.0% | 85.2% |
| 3rsnA00 | 3.90.980.20 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › | 0.63 | 49.0 | 4.35e-01 | 100.0% | 57.0% |
| 1u5tB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 4.55e-01 | 100.0% | 95.3% |
| 2gxaE01 | 1.10.10.510 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Zinc finger, large T-antigen D1 domain | 0.59 | 32.0 | 3.80e-01 | 81.6% | 79.5% |
| 7dklA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 42.0 | 4.22e-01 | 100.0% | 75.4% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.56 | 31.0 | 3.47e-01 | 81.6% | 68.5% |
| 1hu3A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 36.0 | 2.96e-01 | 85.1% | 38.7% |
| 2efeA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.52 | 35.0 | 3.96e-01 | 84.2% | 96.3% |
| 3gcgB00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.52 | 40.0 | 3.67e-01 | 82.5% | 86.8% |
| 4g84A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 42.0 | 3.11e-01 | 93.9% | 89.2% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997952 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 50.0 | 5.69e-01 | 100.0% | 85.9% |
| 5045098 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.78 | 52.0 | 5.85e-01 | 100.0% | 86.7% |
| 3586609 | 101.1.2.278 ↗ | alpha arrays › HTH › HTH › winged helix domain › CNDH2_C | 0.73 | 45.0 | 4.48e-01 | 100.0% | 58.8% |
| 3383835 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.73 | 48.0 | 4.71e-01 | 100.0% | 63.3% |
| 3280969 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.72 | 45.0 | 4.83e-01 | 100.0% | 72.0% |
| 4029555 | 101.1.2.278 ↗ | alpha arrays › HTH › HTH › winged helix domain › CNDH2_C | 0.71 | 43.0 | 4.34e-01 | 100.0% | 60.0% |
| 3467403 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.70 | 44.0 | 5.17e-01 | 96.5% | 90.0% |
| 3258350 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 51.0 | 5.07e-01 | 100.0% | 71.7% |
| 3273635 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 53.0 | 5.19e-01 | 100.0% | 73.6% |
| 3657248 | 101.1.2.394 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 | 0.69 | 49.0 | 5.06e-01 | 100.0% | 78.1% |
| 3785490 | 101.1.2.57 ↗ | alpha arrays › HTH › HTH › winged helix domain › EAP30 | 0.69 | 47.0 | 4.28e-01 | 100.0% | 53.3% |
| 5077356 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 47.0 | 4.59e-01 | 100.0% | 64.0% |
| 3853184 | 101.1.2.68 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 | 0.65 | 52.0 | 4.65e-01 | 100.0% | 61.3% |
| 4971711 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 46.0 | 4.52e-01 | 100.0% | 67.2% |
| 422747 | 101.1.2.186 ↗ | alpha arrays › HTH › HTH › winged helix domain › ASH2L-like_WH | 0.63 | 49.0 | 5.06e-01 | 100.0% | 87.7% |
| 3501333 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.61 | 45.0 | 4.54e-01 | 100.0% | 76.5% |
| 3464534 | 101.1.2.641 ↗ | alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1, DUF7647 | 0.61 | 56.0 | 3.53e-01 | 100.0% | 24.3% |
| 3781035 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 45.0 | 4.91e-01 | 100.0% | 94.7% |
| 3421107 | 192.6.1.0 ↗ | alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain | 0.59 | 23.0 | 3.60e-01 | 79.8% | 93.3% |
| 3196921 | 101.1.2.22 ↗ | alpha arrays › HTH › HTH › winged helix domain › PCI | 0.58 | 39.0 | 4.52e-01 | 100.0% | 97.5% |
| 5044477 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 4.28e-01 | 100.0% | 86.0% |
| 3592490 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 43.0 | 4.55e-01 | 100.0% | 95.0% |
| 3932420 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.56 | 43.0 | 4.50e-01 | 100.0% | 91.4% |
| 3715290 | 101.1.2.77 ↗ | alpha arrays › HTH › HTH › winged helix domain › ESCRT-II | 0.55 | 40.0 | 4.03e-01 | 100.0% | 74.8% |
| 3622571 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.55 | 43.0 | 4.18e-01 | 100.0% | 75.2% |
| 3637726 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 45.0 | 4.63e-01 | 100.0% | 89.1% |
| 3197148 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.53 | 40.0 | 3.87e-01 | 97.4% | 68.9% |
D3
medium
residues 146-334
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1in4A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 49.0 | 5.40e-01 | 84.1% | 91.3% |
| 7jgsD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 53.0 | 5.31e-01 | 79.9% | 92.1% |
| 3nbxX01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 58.0 | 5.67e-01 | 100.0% | 82.8% |
| 3vkhB09 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 52.0 | 5.34e-01 | 81.0% | 90.7% |
| 1g8pA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 52.0 | 5.13e-01 | 81.0% | 96.0% |
| 3vkgA05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 50.0 | 5.60e-01 | 82.5% | 99.3% |
| 3bosB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 47.0 | 5.09e-01 | 82.5% | 87.0% |
| 5ywwA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 44.0 | 4.49e-01 | 84.7% | 69.5% |
| 3vkgA07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 56.0 | 4.41e-01 | 93.1% | 50.1% |
| 1tueD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 54.0 | 5.34e-01 | 100.0% | 85.1% |
| 1svmA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 49.0 | 5.38e-01 | 83.1% | 100.0% |
| 6j5tC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 48.0 | 5.38e-01 | 78.8% | 100.0% |
| 4akgA12 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 39.0 | 4.79e-01 | 72.5% | 100.0% |
| 2eyqA04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 41.0 | 3.78e-01 | 83.1% | 53.0% |
| 2b7oA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 45.0 | 3.68e-01 | 77.2% | 98.8% |
| 2zpaA01 | 3.40.50.11040 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 44.0 | 4.58e-01 | 81.5% | 81.0% |
| 8bnsD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 47.0 | 4.78e-01 | 83.6% | 96.2% |
| 1z6tA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 45.0 | 4.72e-01 | 81.5% | 88.1% |
| 1wp9A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 47.0 | 4.66e-01 | 85.2% | 94.0% |
| 1z6aA01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.58 | 45.0 | 4.41e-01 | 81.5% | 99.0% |
| 6s3eB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 4.52e-01 | 81.5% | 93.8% |
| 2ekdA00 | 3.40.50.11570 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Protein of unknown function DUF257 | 0.57 | 45.0 | 4.43e-01 | 82.0% | 90.6% |
| 6b4kB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 39.0 | 4.07e-01 | 82.5% | 75.9% |
| 1ofuX00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 32.0 | 3.92e-01 | 80.4% | 87.3% |
| 1hv8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 37.0 | 4.12e-01 | 82.0% | 82.8% |
| 2v1xA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 42.0 | 4.00e-01 | 82.0% | 65.5% |
| 4crwB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 37.0 | 4.01e-01 | 82.0% | 79.7% |
| 1wp9A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 38.0 | 4.21e-01 | 83.1% | 88.6% |
| 1wqaA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.54 | 26.0 | 3.61e-01 | 96.3% | 91.7% |
| 6eudA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 35.0 | 3.70e-01 | 84.1% | 71.8% |
| 1zzgA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 41.0 | 4.32e-01 | 100.0% | 91.7% |
| 3tbfA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.52 | 39.0 | 4.36e-01 | 100.0% | 98.0% |
| 2vsqA04 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 32.0 | 3.66e-01 | 99.5% | 82.4% |
| 3rc3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 4.06e-01 | 74.1% | 94.3% |
| 3cw9A01 | 3.40.50.980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 33.0 | 3.47e-01 | 99.5% | 69.0% |
| 1m0wA04 | 3.40.50.1760 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutathione synthase, substrate-binding domain superfamily, eukaryotic | 0.52 | 35.0 | 4.10e-01 | 78.3% | 100.0% |
| 3mebA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.52 | 41.0 | 3.61e-01 | 84.7% | 55.7% |
| 1ulyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 21.0 | 2.95e-01 | 100.0% | 76.4% |
| 3czpB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 3.96e-01 | 84.7% | 87.3% |
| 3tb6B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 36.0 | 3.96e-01 | 79.9% | 91.8% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4443044 | 2004.1.1.1014 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 | 0.79 | 74.0 | 6.17e-01 | 100.0% | 60.3% |
| 4314819 | 2004.1.1.58 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mg_chelatase | 0.76 | 67.0 | 6.64e-01 | 100.0% | 90.8% |
| 4994590 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 70.0 | 6.80e-01 | 100.0% | 91.9% |
| 3952423 | 2004.1.1.339 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3631 | 0.72 | 65.0 | 5.74e-01 | 100.0% | 68.7% |
| 3610966 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 66.0 | 5.70e-01 | 100.0% | 78.6% |
| 3388291 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 45.0 | 5.41e-01 | 82.5% | 98.4% |
| None | — | 0.69 | 54.0 | 5.51e-01 | 84.1% | 84.4% | |
| 3968271 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.69 | 64.0 | 6.19e-01 | 100.0% | 93.8% |
| None | — | 0.69 | 53.0 | 5.56e-01 | 82.5% | 88.2% | |
| None | — | 0.69 | 52.0 | 5.49e-01 | 80.4% | 87.1% | |
| None | — | 0.69 | 53.0 | 5.56e-01 | 85.7% | 87.4% | |
| 4069782 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 58.0 | 5.14e-01 | 91.5% | 63.4% |
| None | — | 0.69 | 52.0 | 5.60e-01 | 80.4% | 92.5% | |
| 5028604 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.69 | 50.0 | 5.48e-01 | 84.7% | 91.0% |
| None | — | 0.69 | 52.0 | 5.45e-01 | 80.4% | 87.1% | |
| 5013281 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 64.0 | 5.51e-01 | 100.0% | 66.7% |
| 4134156 | 2004.1.1.125 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RuvB_N | 0.68 | 52.0 | 5.59e-01 | 81.0% | 93.1% |
| None | — | 0.68 | 52.0 | 5.58e-01 | 81.0% | 93.1% | |
| 3702069 | 2004.1.1.181 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 | 0.68 | 59.0 | 5.68e-01 | 92.1% | 85.9% |
| None | — | 0.68 | 52.0 | 5.21e-01 | 81.0% | 78.4% | |
| 3924464 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.68 | 50.0 | 5.57e-01 | 80.4% | 96.0% |
| 4971317 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.68 | 54.0 | 5.15e-01 | 82.5% | 91.6% |
| None | — | 0.67 | 51.0 | 5.50e-01 | 80.4% | 92.5% | |
| 3958095 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 58.0 | 4.78e-01 | 90.5% | 69.2% |
| 5018481 | 2004.1.1.136 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF927 | 0.66 | 59.0 | 5.15e-01 | 100.0% | 63.5% |
| 5025838 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.66 | 52.0 | 5.52e-01 | 81.0% | 98.8% |
| 3274277 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.66 | 51.0 | 5.21e-01 | 80.4% | 100.0% |
| 3960482 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 52.0 | 5.12e-01 | 82.5% | 99.0% |
| 5081314 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.66 | 57.0 | 5.14e-01 | 100.0% | 67.7% |
| None | — | 0.65 | 59.0 | 5.65e-01 | 100.0% | 85.1% | |
| 4271043 | 2004.1.1.223 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › bpMoxR | 0.65 | 59.0 | 5.58e-01 | 100.0% | 83.2% |
| 3950699 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.65 | 51.0 | 4.86e-01 | 80.4% | 93.0% |
| 3954608 | 2004.1.1.409 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 | 0.65 | 57.0 | 5.14e-01 | 100.0% | 68.8% |
| 4931926 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 59.0 | 4.99e-01 | 100.0% | 59.4% |
| 4318504 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.64 | 52.0 | 5.48e-01 | 86.2% | 97.6% |
| 3287721 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.63 | 49.0 | 5.17e-01 | 79.9% | 98.2% |
| 3922834 | 2004.1.1.180 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_6 | 0.63 | 49.0 | 4.84e-01 | 86.2% | 77.5% |
| 4030700 | 2004.1.1.292 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AFG1_ATPase | 0.62 | 51.0 | 5.18e-01 | 87.3% | 92.1% |
| 2482197 | 2004.1.1.142 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Polyoma_lg_T_C | 0.62 | 42.0 | 4.97e-01 | 71.4% | 100.0% |
| 4888756 | 148.1.3.13 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_9 | 0.62 | 53.0 | 5.29e-01 | 90.5% | 97.4% |
| 4941848 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 55.0 | 4.41e-01 | 100.0% | 48.8% |
| 3974453 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.61 | 47.0 | 4.80e-01 | 79.9% | 83.2% |
| 4202661 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.61 | 49.0 | 5.04e-01 | 83.1% | 93.9% |
| 4023933 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.61 | 49.0 | 4.65e-01 | 83.6% | 94.1% |
| 4942206 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 46.0 | 4.63e-01 | 79.4% | 92.8% |
| 4002451 | 2004.1.1.93 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Dynein_heavy | 0.60 | 48.0 | 4.92e-01 | 91.5% | 85.9% |
| 4033843 | 2004.1.1.313 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › VapE-like_dom | 0.60 | 51.0 | 5.06e-01 | 100.0% | 87.7% |
| 3986258 | 2004.1.1.662 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD, DEAD_2, Helicase_C_2 | 0.59 | 49.0 | 3.53e-01 | 87.3% | 86.4% |
| 4058854 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.59 | 46.0 | 4.46e-01 | 81.5% | 89.0% |
| 3483493 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 47.0 | 4.56e-01 | 84.7% | 87.6% |
| 4971067 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 46.0 | 4.16e-01 | 83.1% | 95.7% |
| 3950801 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.58 | 45.0 | 3.90e-01 | 82.5% | 67.5% |
| 5010054 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 36.0 | 3.95e-01 | 100.0% | 78.0% |
| None | — | 0.56 | 47.0 | 3.54e-01 | 89.4% | 75.1% | |
| 3648436 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.56 | 47.0 | 3.52e-01 | 87.8% | 91.4% |
| 4456403 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 37.0 | 3.81e-01 | 99.5% | 67.0% |
| 3933239 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.56 | 37.0 | 3.99e-01 | 82.0% | 77.0% |
| 3894634 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 41.0 | 4.03e-01 | 83.6% | 71.0% |
| 5053828 | 7584.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › AMP-binding | 0.55 | 37.0 | 4.02e-01 | 99.5% | 79.4% |
| 4173307 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.55 | 33.0 | 3.32e-01 | 99.5% | 56.3% |
| 3399964 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 39.0 | 3.94e-01 | 82.0% | 71.3% |
| 4989786 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.54 | 47.0 | 4.70e-01 | 93.7% | 95.4% |
| 3352911 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 39.0 | 4.07e-01 | 99.5% | 80.6% |
| 4797338 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.53 | 37.0 | 3.89e-01 | 81.5% | 77.8% |
| 5064538 | 2007.6.1.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › bact-PGI_C | 0.53 | 36.0 | 3.90e-01 | 100.0% | 82.5% |
| 4515314 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.53 | 36.0 | 3.57e-01 | 98.9% | 64.5% |
| 3996272 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.52 | 41.0 | 3.99e-01 | 82.5% | 75.2% |
| 3970148 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 31.0 | 3.46e-01 | 98.9% | 72.7% |
| 3588100 | 2004.1.1.194 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C_2 | 0.52 | 40.0 | 3.78e-01 | 81.0% | 70.0% |
| 3709747 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.51 | 36.0 | 3.41e-01 | 99.5% | 58.7% |
| 3464471 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 36.0 | 3.93e-01 | 81.5% | 87.5% |
| 4017281 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.50 | 38.0 | 3.72e-01 | 98.9% | 71.0% |
| 3237141 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.50 | 44.0 | 3.70e-01 | 93.1% | 76.2% |
| 5029436 | 2004.1.1.234 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_D3-like | 0.50 | 37.0 | 3.49e-01 | 80.4% | 61.7% |
| 3607700 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.50 | 34.0 | 3.43e-01 | 82.0% | 66.2% |
D4
medium
residues 335-412
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.63 | 44.0 | 4.58e-01 | 85.9% | 82.9% |
| 1h3lB00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 49.0 | 4.95e-01 | 92.3% | 89.7% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.60 | 46.0 | 3.62e-01 | 84.6% | 43.0% |
| 2a07J00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 39.0 | 3.89e-01 | 74.4% | 66.3% |
| 2zc0A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.57 | 42.0 | 3.30e-01 | 79.5% | 69.8% |
| 1u5tB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 35.0 | 3.66e-01 | 70.5% | 71.0% |
| 2l02A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 31.0 | 3.10e-01 | 70.5% | 51.2% |
| 2dk8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 31.0 | 3.29e-01 | 70.5% | 66.2% |
| 2vxzA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 30.0 | 3.22e-01 | 70.5% | 63.6% |
| 1in0A01 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 3.98e-01 | 85.9% | 84.3% |
| 1darA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 2.85e-01 | 83.3% | 32.2% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.52 | 40.0 | 3.60e-01 | 83.3% | 87.0% |
| 2kloA00 | 1.10.10.1420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain | 0.51 | 38.0 | 3.23e-01 | 84.6% | 45.7% |
| 1eo0A00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.51 | 37.0 | 3.72e-01 | 88.5% | 79.2% |
| 1bjaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 32.0 | 3.05e-01 | 78.2% | 50.5% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.51 | 37.0 | 3.82e-01 | 87.2% | 84.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4443044 | 2004.1.1.1014 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27228 | 0.77 | 69.0 | 4.57e-01 | 100.0% | 25.2% |
| 4232234 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.63 | 50.0 | 3.82e-01 | 88.5% | 92.6% |
| 3787051 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.61 | 49.0 | 4.73e-01 | 91.0% | 76.7% |
| 3356447 | 207.1.1.258 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WH_DRP | 0.58 | 41.0 | 2.73e-01 | 73.1% | 21.1% |
| 5058130 | 304.120.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer | 0.58 | 45.0 | 4.64e-01 | 83.3% | 89.3% |
| 3561147 | 327.16.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif II in type III secretion system › Ring-building motif II in type III secretion system | 0.57 | 38.0 | 4.40e-01 | 84.6% | 98.2% |
| 3753321 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 46.0 | 3.02e-01 | 91.0% | 32.4% |
| 4938674 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.55 | 30.0 | 3.34e-01 | 98.7% | 66.7% |
| 4203720 | 101.1.2.309 ↗ | alpha arrays › HTH › HTH › winged helix domain › GPAT_C | 0.54 | 39.0 | 3.67e-01 | 75.6% | 96.8% |
| 4024318 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 3.85e-01 | 82.1% | 71.8% |
| 3244608 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.54 | 41.0 | 2.63e-01 | 83.3% | 24.9% |
| 4018469 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 37.0 | 3.44e-01 | 73.1% | 59.0% |
| 3419597 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.52 | 37.0 | 3.15e-01 | 73.1% | 84.0% |
| 5033536 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 33.0 | 3.05e-01 | 74.4% | 46.4% |
| 3920157 | 109.4.1.2709 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIP120, HEAT_GCN1 | 0.52 | 37.0 | 2.15e-01 | 74.4% | 22.7% |
| 3309169 | 101.1.1.121 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_3 | 0.51 | 36.0 | 3.07e-01 | 74.4% | 80.8% |
| 4968601 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 37.0 | 3.43e-01 | 79.5% | 77.1% |
| 3868067 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.51 | 40.0 | 2.69e-01 | 87.2% | 29.1% |
| 3958566 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.51 | 32.0 | 3.16e-01 | 74.4% | 55.6% |
| 3958918 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 38.0 | 3.68e-01 | 87.2% | 81.1% |
D5
medium
residues 541-603