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IMGVR_UViG_3300021285_000052-3300021285-Ga0214509_10009455
Arc-VirIMGVR_UViG_3300021285_000052-3300021285-Ga0214509_10009455
Identity
- Kingdom:
- archaea
Quality
61.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 187-299
Domain cluster:
rep: NC_029048.2__YP_009221738.1__PHICD211_20135__00153__D2-127
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08284.17 best | RVP_2 | 22.3 | 1.30e-04 | 98.2% | 69.1% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3s8iA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.85 | 76.0 | 7.38e-01 | 100.0% | 86.3% |
| 1fmbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.85 | 69.0 | 7.21e-01 | 93.8% | 93.3% |
| 1a94A00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.81 | 63.0 | 6.74e-01 | 93.8% | 92.9% |
| 2fivA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.80 | 69.0 | 6.96e-01 | 92.9% | 91.2% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.80 | 71.0 | 6.91e-01 | 92.9% | 95.9% |
| 2jysA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.78 | 60.0 | 6.66e-01 | 99.1% | 100.0% |
| 1qs8A01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.76 | 70.0 | 6.00e-01 | 100.0% | 92.6% |
| 1yg9A02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.70 | 64.0 | 6.08e-01 | 99.1% | 100.0% |
| 5c9dB00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.69 | 63.0 | 6.23e-01 | 99.1% | 93.3% |
| 1miqA02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.64 | 59.0 | 5.32e-01 | 100.0% | 86.8% |
| 1xoiA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 45.0 | 3.06e-01 | 98.2% | 83.6% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3496964 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.87 | 81.0 | 7.76e-01 | 100.0% | 88.0% |
| 3168921 | 304.48.1.105 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Peptidase_A2B | 0.87 | 73.0 | 7.81e-01 | 96.5% | 100.0% |
| 3608668 | 1.1.1.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease | 0.87 | 80.0 | 7.16e-01 | 100.0% | 73.3% |
| 3173885 | 2484.1.1.307 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A2B | 0.87 | 75.0 | 7.78e-01 | 98.2% | 97.1% |
| 4934668 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.86 | 82.0 | 7.76e-01 | 100.0% | 98.5% |
| 3924493 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.86 | 69.0 | 7.50e-01 | 99.1% | 100.0% |
| 3994789 | 1.1.1.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease | 0.86 | 79.0 | 7.32e-01 | 100.0% | 79.3% |
| 3868675 | 1.1.1.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease | 0.85 | 78.0 | 6.69e-01 | 100.0% | 64.7% |
| 3737912 | 1.1.1.13 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Peptidase_A2_2 | 0.85 | 72.0 | 7.63e-01 | 91.2% | 100.0% |
| 5032107 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.85 | 80.0 | 7.62e-01 | 100.0% | 98.5% |
| 3925981 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.85 | 74.0 | 7.54e-01 | 95.6% | 94.5% |
| 3797665 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 78.0 | 7.11e-01 | 100.0% | 76.6% |
| 3931384 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 77.0 | 7.85e-01 | 97.3% | 99.1% |
| 3513100 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.84 | 78.0 | 7.66e-01 | 100.0% | 92.5% |
| 4 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.84 | 69.0 | 7.19e-01 | 93.8% | 93.3% |
| 3225435 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.84 | 71.0 | 7.13e-01 | 100.0% | 87.6% |
| 3935794 | 1.1.1.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease | 0.84 | 79.0 | 7.16e-01 | 100.0% | 77.2% |
| 3735567 | 1.1.1.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease | 0.84 | 77.0 | 6.01e-01 | 100.0% | 48.9% |
| 3938624 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.84 | 75.0 | 7.54e-01 | 100.0% | 93.9% |
| 3933423 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 75.0 | 7.63e-01 | 94.7% | 98.2% |
| 3935948 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.84 | 76.0 | 7.64e-01 | 97.3% | 98.3% |
| 3427964 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.84 | 77.0 | 7.22e-01 | 100.0% | 82.2% |
| 3931768 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.83 | 75.0 | 7.22e-01 | 100.0% | 86.4% |
| 3249073 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.83 | 76.0 | 7.42e-01 | 100.0% | 91.7% |
| 4933012 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.83 | 77.0 | 7.59e-01 | 99.1% | 95.8% |
| 3853621 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.83 | 77.0 | 7.54e-01 | 100.0% | 93.3% |
| 3421072 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.83 | 77.0 | 7.70e-01 | 100.0% | 97.4% |
| 3724372 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 71.0 | 6.27e-01 | 90.3% | 69.0% |
| 3461051 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.82 | 77.0 | 7.46e-01 | 100.0% | 90.4% |
| 3732052 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.82 | 71.0 | 7.23e-01 | 91.2% | 100.0% |
| 3504655 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.82 | 74.0 | 7.37e-01 | 96.5% | 93.0% |
| 3902845 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.82 | 76.0 | 7.27e-01 | 99.1% | 90.8% |
| 5023444 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.82 | 74.0 | 7.54e-01 | 95.6% | 100.0% |
| 4969397 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.82 | 77.0 | 7.70e-01 | 100.0% | 100.0% |
| 3821648 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.82 | 77.0 | 7.43e-01 | 100.0% | 96.0% |
| 3541617 | 1.1.1.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease | 0.82 | 73.0 | 7.18e-01 | 100.0% | 88.3% |
| 3773238 | 1.1.1.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease | 0.82 | 76.0 | 7.25e-01 | 100.0% | 86.2% |
| 3511017 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.82 | 76.0 | 7.58e-01 | 100.0% | 97.4% |
| 3878578 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.82 | 77.0 | 7.39e-01 | 100.0% | 94.4% |
| 3436417 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.82 | 76.0 | 7.21e-01 | 100.0% | 86.2% |
| 3782336 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.81 | 75.0 | 7.17e-01 | 99.1% | 86.2% |
| 3926561 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.81 | 73.0 | 7.15e-01 | 100.0% | 90.0% |
| 3529283 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.81 | 73.0 | 7.08e-01 | 96.5% | 92.0% |
| 3559341 | 1.1.1.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › PF30863 | 0.81 | 75.0 | 6.98e-01 | 100.0% | 85.0% |
| 3939777 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 75.0 | 7.30e-01 | 100.0% | 91.1% |
| 3833862 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 75.0 | 7.46e-01 | 100.0% | 96.5% |
| 3928252 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 72.0 | 7.43e-01 | 100.0% | 99.1% |
| 3510736 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.81 | 74.0 | 7.41e-01 | 100.0% | 96.5% |
| 3730035 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 66.0 | 7.04e-01 | 86.7% | 100.0% |
| 3520846 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.81 | 67.0 | 7.07e-01 | 93.8% | 99.0% |
| 4964766 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.81 | 72.0 | 7.34e-01 | 96.5% | 97.3% |
| 3938396 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.80 | 70.0 | 7.31e-01 | 92.9% | 100.0% |
| 3912599 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.80 | 74.0 | 7.24e-01 | 100.0% | 90.8% |
| 3514088 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.80 | 75.0 | 7.07e-01 | 100.0% | 91.8% |
| 3927612 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.80 | 74.0 | 7.43e-01 | 100.0% | 97.4% |
| 3518811 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.80 | 73.0 | 7.44e-01 | 98.2% | 100.0% |
| 5001647 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 69.0 | 7.07e-01 | 91.2% | 100.0% |
| 3935726 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.80 | 73.0 | 7.37e-01 | 100.0% | 97.4% |
| 2 | 1.1.1.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP | 0.80 | 69.0 | 6.94e-01 | 92.9% | 91.2% |
| 3933744 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 69.0 | 7.02e-01 | 92.0% | 93.6% |
| 3926190 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.80 | 74.0 | 6.52e-01 | 100.0% | 72.5% |
| 3793978 | 1.1.1.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › DUF1758 | 0.80 | 75.0 | 6.47e-01 | 100.0% | 94.5% |
| 3731145 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.80 | 70.0 | 6.79e-01 | 93.8% | 89.6% |
| 4984762 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.80 | 74.0 | 7.30e-01 | 100.0% | 96.7% |
| 3506977 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 75.0 | 6.82e-01 | 100.0% | 93.0% |
| 3447999 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.79 | 73.0 | 7.19e-01 | 98.2% | 96.7% |
| 3966871 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 72.0 | 6.84e-01 | 96.5% | 99.2% |
| 3924552 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.79 | 74.0 | 7.24e-01 | 100.0% | 96.7% |
| 3937611 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.79 | 71.0 | 7.20e-01 | 97.3% | 98.2% |
| 4656484 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.79 | 73.0 | 6.54e-01 | 98.2% | 89.3% |
| 3969410 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 67.0 | 6.59e-01 | 89.4% | 100.0% |
| 4933116 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.79 | 70.0 | 7.05e-01 | 100.0% | 94.8% |
| 5031162 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 73.0 | 7.27e-01 | 98.2% | 96.5% |
| 3262861 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.79 | 73.0 | 7.28e-01 | 100.0% | 99.1% |
| 3929659 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.79 | 74.0 | 6.90e-01 | 100.0% | 88.9% |
| 17 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.78 | 73.0 | 7.00e-01 | 98.2% | 97.6% |
| 5028105 | 1.1.1.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp | 0.78 | 72.0 | 6.76e-01 | 100.0% | 89.6% |
| 3515226 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.78 | 66.0 | 6.83e-01 | 93.8% | 98.1% |
| 3513377 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.78 | 67.0 | 6.97e-01 | 97.3% | 100.0% |
| 3934416 | 1.1.1.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › RVP_2 | 0.78 | 70.0 | 6.92e-01 | 97.3% | 92.5% |
| 3931849 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.77 | 72.0 | 6.96e-01 | 100.0% | 91.2% |
| 5031732 | 1.1.1.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › gag-asp_proteas | 0.77 | 70.0 | 6.98e-01 | 100.0% | 95.7% |
| 4882945 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.77 | 72.0 | 6.79e-01 | 98.2% | 93.1% |
| 3505920 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.77 | 65.0 | 6.63e-01 | 93.8% | 93.6% |
| 3516105 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.76 | 71.0 | 6.69e-01 | 100.0% | 94.8% |
| 4993154 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.76 | 71.0 | 6.77e-01 | 100.0% | 89.1% |
| 3931343 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.76 | 68.0 | 6.81e-01 | 97.3% | 99.1% |
| 3582847 | 1.1.2.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › DUF1758 | 0.74 | 69.0 | 6.66e-01 | 100.0% | 97.6% |
| 5031219 | 1.1.1.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp_protease_2 | 0.73 | 65.0 | 6.42e-01 | 96.5% | 100.0% |
| 3846274 | 1.1.1.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease | 0.73 | 66.0 | 6.59e-01 | 100.0% | 93.9% |