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IMGVR_UViG_3300021285_000054-3300021285-Ga0214509_10008943
Arc-VirIMGVR_UViG_3300021285_000054-3300021285-Ga0214509_10008943
Identity
- Kingdom:
- archaea
Quality
49.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 177-222_250-342
D2
medium
residues 343-382_452-463
Domain cluster:
rep: MN098326.1__QFG06698.1__CPT_Myduc_076__00075__D272-326_427-435
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21939.2 best | Gp10_C | 29.0 | 2.60e-06 | 73.1% | 23.2% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l7oA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 47.0 | 4.24e-01 | 100.0% | 66.7% |
| 2q7bA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 46.0 | 3.27e-01 | 100.0% | 29.3% |
| 3dxyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 42.0 | 2.93e-01 | 100.0% | 31.4% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3409025 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 45.0 | 3.20e-01 | 100.0% | 29.2% |
| 3691305 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.54 | 47.0 | 3.07e-01 | 100.0% | 25.1% |
| 3472623 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 3.29e-01 | 100.0% | 49.7% |
| 3611449 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.52 | 37.0 | 2.99e-01 | 80.8% | 81.7% |
| 4058358 | 327.11.2.26 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_N4BP1_1st | 0.51 | 42.0 | 3.76e-01 | 100.0% | 75.0% |
| 3723339 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.50 | 43.0 | 3.42e-01 | 100.0% | 87.3% |