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IMGVR_UViG_3300021295_000028-3300021295-Ga0214522_100005532
Arc-VirIMGVR_UViG_3300021295_000028-3300021295-Ga0214522_100005532
Identity
- Kingdom:
- archaea
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-115
Domain cluster:
rep: MH643778.1__AXN52982.1__PAER24_00650__00065__D1-116
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4axhA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.73 | 58.0 | 5.56e-01 | 100.0% | 74.2% |
| 2nbmA00 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.73 | 58.0 | 5.93e-01 | 100.0% | 87.4% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 27.0 | 3.73e-01 | 72.6% | 66.7% |
| 4nurA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.69 | 57.0 | 5.41e-01 | 100.0% | 75.6% |
| 2cfuA03 | 3.30.1050.10 | Alpha Beta › 2-Layer Sandwich › Nonspecific Lipid-transfer Protein; Chain A › SCP2 sterol-binding domain | 0.68 | 56.0 | 5.38e-01 | 100.0% | 76.0% |
| 1azpA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 31.0 | 3.98e-01 | 81.4% | 74.2% |
| 5tkwA01 | 3.30.420.380 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.58 | 42.0 | 3.68e-01 | 75.2% | 98.2% |
| 3fqmA01 | 2.20.25.210 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B | 0.57 | 30.0 | 3.91e-01 | 95.6% | 95.1% |
| 4c23B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 38.0 | 3.01e-01 | 73.5% | 96.6% |
| 6w9rB01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 41.0 | 3.66e-01 | 81.4% | 66.0% |
| 3agkA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.53 | 35.0 | 3.46e-01 | 95.6% | 62.1% |
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 38.0 | 2.75e-01 | 76.1% | 45.8% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.52 | 43.0 | 4.31e-01 | 97.3% | 88.6% |
| 4mdyA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.51 | 42.0 | 3.88e-01 | 90.3% | 92.6% |
| 2eobA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 38.0 | 3.83e-01 | 98.2% | 78.8% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 38.0 | 3.99e-01 | 98.2% | 89.0% |
| 4gniA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 37.0 | 4.14e-01 | 83.2% | 100.0% |
| 2f9wA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.50 | 39.0 | 3.76e-01 | 83.2% | 100.0% |
| 1c5kA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 38.0 | 2.99e-01 | 82.3% | 85.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047804 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.79 | 74.0 | 7.25e-01 | 100.0% | 95.8% |
| 3958172 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.76 | 65.0 | 6.37e-01 | 100.0% | 85.0% |
| 4975845 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.76 | 70.0 | 6.83e-01 | 100.0% | 94.4% |
| 5017194 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.76 | 62.0 | 6.47e-01 | 86.7% | 98.1% |
| 3957099 | 268.1.1.4 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › Alkyl_sulf_C | 0.75 | 60.0 | 5.98e-01 | 100.0% | 81.7% |
| 3282850 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.75 | 60.0 | 5.76e-01 | 100.0% | 74.6% |
| 3173778 | 268.1.1.4 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › Alkyl_sulf_C | 0.71 | 58.0 | 5.59e-01 | 100.0% | 77.6% |
| 5065707 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.71 | 60.0 | 6.13e-01 | 100.0% | 94.5% |
| 1172778 | 268.1.1.4 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › Alkyl_sulf_C | 0.70 | 57.0 | 5.52e-01 | 100.0% | 77.2% |
| 5003301 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.69 | 57.0 | 5.93e-01 | 89.4% | 99.0% |
| 5071420 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.69 | 62.0 | 6.21e-01 | 98.2% | 96.5% |
| 5079400 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.69 | 60.0 | 6.20e-01 | 99.1% | 99.1% |
| 3982093 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.69 | 58.0 | 5.40e-01 | 100.0% | 72.9% |
| 3966660 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.69 | 56.0 | 5.29e-01 | 100.0% | 72.6% |
| 6514 | 268.1.1.4 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › Alkyl_sulf_C | 0.68 | 56.0 | 5.45e-01 | 100.0% | 78.4% |
| 4996145 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.68 | 62.0 | 6.13e-01 | 100.0% | 95.0% |
| 4935436 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.68 | 56.0 | 5.63e-01 | 93.8% | 86.1% |
| 5073224 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.68 | 57.0 | 5.55e-01 | 100.0% | 82.4% |
| 5053269 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.67 | 56.0 | 5.40e-01 | 100.0% | 80.0% |
| 3388266 | 268.1.1.9 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › DUF7884 | 0.67 | 47.0 | 4.91e-01 | 100.0% | 78.1% |
| 3839330 | 268.1.1.9 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › DUF7884 | 0.67 | 45.0 | 4.72e-01 | 99.1% | 77.0% |
| 2448259 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.67 | 57.0 | 5.53e-01 | 100.0% | 82.5% |
| 3688137 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.67 | 61.0 | 5.71e-01 | 100.0% | 83.0% |
| 3696128 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.67 | 60.0 | 5.78e-01 | 100.0% | 88.5% |
| 5051203 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.67 | 55.0 | 5.16e-01 | 100.0% | 72.1% |
| 5051557 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.66 | 60.0 | 5.63e-01 | 100.0% | 82.9% |
| 4937487 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.66 | 59.0 | 5.80e-01 | 100.0% | 91.9% |
| 5051650 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.65 | 56.0 | 5.22e-01 | 100.0% | 76.8% |
| 3970641 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.65 | 56.0 | 5.52e-01 | 100.0% | 89.2% |
| 5047808 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.64 | 54.0 | 5.20e-01 | 100.0% | 80.0% |
| 4939954 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.64 | 58.0 | 5.63e-01 | 100.0% | 94.4% |
| 5007973 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.63 | 55.0 | 5.52e-01 | 100.0% | 93.9% |
| 5053605 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.63 | 58.0 | 5.60e-01 | 100.0% | 91.9% |
| 4936358 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.61 | 55.0 | 5.24e-01 | 100.0% | 84.6% |
| None | — | 0.60 | 42.0 | 3.64e-01 | 71.7% | 86.9% | |
| 4936719 | 268.1.1.1 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related › SCP2 | 0.59 | 54.0 | 5.25e-01 | 100.0% | 90.4% |
| 3213262 | 145.1.1.0 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain | 0.56 | 31.0 | 3.26e-01 | 82.3% | 59.0% |
| 3728783 | 223.2.1.15 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Longin | 0.56 | 40.0 | 3.75e-01 | 75.2% | 91.4% |
| 4024327 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 41.0 | 3.01e-01 | 78.8% | 43.2% |
| 3385764 | 4954.1.1.0 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit | 0.54 | 29.0 | 3.51e-01 | 77.0% | 80.0% |
| 2814146 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.53 | 35.0 | 4.22e-01 | 96.5% | 100.0% |
| 4977337 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.53 | 36.0 | 3.33e-01 | 92.0% | 52.7% |
| 4188283 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 29.0 | 3.41e-01 | 77.9% | 76.2% |
| 5032371 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.51 | 31.0 | 3.90e-01 | 94.7% | 98.6% |
| 3221927 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.51 | 40.0 | 2.99e-01 | 84.1% | 58.6% |
| 4547080 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.50 | 34.0 | 4.04e-01 | 77.0% | 98.8% |