←Back to structures
IMGVR_UViG_3300021300_000004-3300021300-Ga0214523_100005257
Arc-VirIMGVR_UViG_3300021300_000004-3300021300-Ga0214523_100005257
Identity
- Kingdom:
- archaea
Quality
81.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 17-205
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1gpjA03 | 1.10.1200.70 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glutamyl tRNA-reductase dimerization domain | 0.67 | 32.0 | 4.69e-01 | 79.9% | 100.0% |
| 4an8A02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.66 | 38.0 | 4.55e-01 | 88.9% | 85.2% |
| 1egdA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.63 | 32.0 | 3.70e-01 | 86.8% | 65.2% |
| 2ix5A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.63 | 32.0 | 3.56e-01 | 86.8% | 59.4% |
| 3vprA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 35.0 | 3.97e-01 | 89.4% | 73.1% |
| 3ppbA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 36.0 | 3.68e-01 | 89.4% | 59.0% |
| 3ljbA00 | 1.20.120.1240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain | 0.59 | 50.0 | 4.77e-01 | 99.5% | 77.6% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 32.0 | 4.17e-01 | 88.4% | 92.7% |
| 2id6A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 38.0 | 4.17e-01 | 89.4% | 80.5% |
| 4ib4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 41.0 | 3.60e-01 | 90.5% | 48.4% |
| 2wbiB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 32.0 | 3.45e-01 | 88.9% | 62.0% |
| 3t6gB00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.56 | 35.0 | 4.06e-01 | 94.7% | 86.6% |
| 2pg0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.55 | 31.0 | 3.40e-01 | 92.1% | 65.1% |
| 4bejB02 | 1.20.120.1240 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain | 0.55 | 49.0 | 4.62e-01 | 98.4% | 82.1% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 34.0 | 4.17e-01 | 88.9% | 99.1% |
| 1rx0A03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.54 | 30.0 | 3.31e-01 | 89.9% | 63.9% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 30.0 | 3.33e-01 | 78.3% | 67.8% |
| 2y44A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.51 | 42.0 | 4.31e-01 | 87.8% | 93.5% |
| 4alyB00 | 1.10.3160.10 | Mainly Alpha › Orthogonal Bundle › Bbcrasp-1 › Bbcrasp-1 | 0.51 | 37.0 | 3.72e-01 | 92.1% | 73.8% |
| 1y4cA03 | 1.20.120.660 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain | 0.51 | 29.0 | 3.57e-01 | 87.3% | 89.4% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.51 | 45.0 | 3.97e-01 | 94.2% | 82.3% |
| 3i9wA00 | 1.20.58.920 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 36.0 | 3.18e-01 | 70.9% | 84.1% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.51 | 43.0 | 4.33e-01 | 91.5% | 96.9% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388455 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.71 | 36.0 | 4.51e-01 | 75.1% | 78.3% |
| 3888994 | 601.19.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Apolipoprotein | 0.65 | 46.0 | 5.19e-01 | 94.7% | 95.9% |
| 4411923 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.64 | 44.0 | 4.27e-01 | 95.2% | 61.9% |
| 4024445 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.62 | 45.0 | 5.08e-01 | 92.6% | 99.3% |
| 3735664 | 3615.1.1.0 ↗ | alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain | 0.60 | 50.0 | 3.95e-01 | 100.0% | 43.2% |
| 5057238 | 604.39.1.9 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › Vut_1 | 0.60 | 41.0 | 4.08e-01 | 89.9% | 64.5% |
| 4013657 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.60 | 33.0 | 3.74e-01 | 85.2% | 70.0% |
| 5022708 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.59 | 38.0 | 4.05e-01 | 89.4% | 71.2% |
| 4593595 | 3835.1.1.0 ↗ | alpha bundles › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein › Type I hyperactive antifreeze protein | 0.58 | 42.0 | 4.02e-01 | 73.0% | 97.7% |
| 3839376 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.57 | 37.0 | 3.94e-01 | 78.3% | 73.0% |
| 3561592 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 38.0 | 3.30e-01 | 86.2% | 43.1% |
| 3911777 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.56 | 29.0 | 3.41e-01 | 92.1% | 68.1% |
| 3398953 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.56 | 49.0 | 4.25e-01 | 94.2% | 63.1% |
| 4950794 | 3415.1.1.0 ↗ | alpha complex topology › Concentrative nucleoside transporter › Concentrative nucleoside transporter › Concentrative nucleoside transporter | 0.56 | 38.0 | 3.19e-01 | 87.3% | 41.9% |
| 3741125 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.54 | 37.0 | 3.63e-01 | 94.2% | 62.7% |
| 3428496 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.54 | 35.0 | 3.69e-01 | 92.1% | 70.3% |
| 3565045 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.54 | 29.0 | 3.22e-01 | 97.4% | 64.0% |
| 4944844 | 1075.1.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane | 0.53 | 43.0 | 3.81e-01 | 88.9% | 59.6% |
| 3316949 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.53 | 30.0 | 3.55e-01 | 91.0% | 78.5% |
| 3464571 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.53 | 34.0 | 3.19e-01 | 84.1% | 50.8% |
| 3550685 | 4177.1.1.38 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Tektin | 0.52 | 39.0 | 4.11e-01 | 95.2% | 84.0% |
| 3952252 | 611.4.1.2 ↗ | alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like › Acyl-CoA_dh_C | 0.52 | 37.0 | 4.12e-01 | 97.9% | 95.7% |
| 3534459 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.52 | 47.0 | 4.18e-01 | 96.3% | 79.6% |
| 3619297 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.52 | 45.0 | 4.53e-01 | 99.5% | 89.2% |
| 3958131 | 611.4.1.0 ↗ | alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like | 0.52 | 35.0 | 4.05e-01 | 94.2% | 95.6% |
| 3636334 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.51 | 45.0 | 4.10e-01 | 94.2% | 84.4% |
| 3911997 | 4177.1.1.4 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › IMD | 0.50 | 46.0 | 4.10e-01 | 98.9% | 77.4% |
| 3166166 | 138.1.1.3 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNApol3-delta_C | 0.50 | 29.0 | 3.62e-01 | 85.7% | 93.0% |
D2
medium
residues 206-274
Domain cluster:
rep: IMGVR_UViG_3300045988_178991-3300045988-Ga0495776_136811_45785_46564__D181-244