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IMGVR_UViG_3300021326_000192-3300021326-Ga0214518_10006972
Arc-VirIMGVR_UViG_3300021326_000192-3300021326-Ga0214518_10006972
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-75
Domain cluster:
rep: IMGVR_UViG_3300026311_000663-3300026311-Ga0209723_10013027__D58-160
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3okgA02 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.92 | 85.0 | 6.16e-01 | 100.0% | 39.8% |
| 1ydxA03 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.85 | 70.0 | 5.50e-01 | 100.0% | 45.1% |
| 1ydxA01 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.85 | 68.0 | 5.59e-01 | 100.0% | 50.0% |
| 1yf2A03 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.84 | 78.0 | 6.13e-01 | 100.0% | 57.8% |
| 1yf2A01 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.84 | 78.0 | 5.85e-01 | 100.0% | 48.5% |
| 2p0oA02 | 2.40.100.10 | Mainly Beta › Beta Barrel › Cyclophilin › Cyclophilin-like | 0.65 | 44.0 | 3.75e-01 | 70.7% | 51.3% |
| 7syvx01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 39.0 | 3.24e-01 | 81.3% | 69.3% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5059847 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.97 | 93.0 | 6.94e-01 | 100.0% | 47.8% |
| 5019246 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.95 | 89.0 | 6.39e-01 | 100.0% | 40.0% |
| 5019092 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.94 | 88.0 | 6.35e-01 | 100.0% | 40.0% |
| 4964247 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.94 | 90.0 | 5.47e-01 | 100.0% | 19.5% |
| 4967988 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.94 | 87.0 | 6.04e-01 | 100.0% | 34.4% |
| 4989315 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.87 | 81.0 | 4.93e-01 | 100.0% | 20.5% |
| 5002484 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.86 | 81.0 | 5.68e-01 | 100.0% | 38.1% |
| 4937813 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.85 | 80.0 | 4.85e-01 | 100.0% | 20.6% |
| 5018504 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.85 | 79.0 | 5.60e-01 | 100.0% | 40.0% |
| 4174469 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.85 | 68.0 | 4.80e-01 | 100.0% | 29.8% |
| 3987436 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.84 | 78.0 | 4.70e-01 | 100.0% | 18.7% |
| 4950209 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.84 | 78.0 | 5.77e-01 | 100.0% | 44.6% |
| 3988777 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.84 | 78.0 | 5.67e-01 | 100.0% | 43.8% |
| 4931721 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.83 | 78.0 | 4.78e-01 | 100.0% | 21.8% |
| 4967679 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.83 | 77.0 | 5.29e-01 | 100.0% | 35.2% |
| 4967678 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.83 | 77.0 | 4.64e-01 | 100.0% | 18.6% |
| 5039257 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.82 | 76.0 | 5.40e-01 | 100.0% | 39.5% |
| 4936611 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.82 | 76.0 | 4.63e-01 | 100.0% | 19.0% |
| 5004386 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.82 | 74.0 | 5.44e-01 | 100.0% | 42.1% |
| 5017975 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.82 | 75.0 | 4.68e-01 | 100.0% | 21.6% |
| 4458448 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.81 | 70.0 | 4.45e-01 | 100.0% | 20.9% |
| 3602866 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.81 | 74.0 | 4.52e-01 | 100.0% | 20.7% |
| 4812694 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.80 | 64.0 | 5.76e-01 | 100.0% | 64.0% |
| 4315663 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.80 | 72.0 | 4.49e-01 | 100.0% | 20.5% |
| 5032020 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 69.0 | 4.99e-01 | 100.0% | 36.0% |
| 4093841 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 66.0 | 4.65e-01 | 100.0% | 31.1% |
| 5019091 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.78 | 71.0 | 5.08e-01 | 100.0% | 38.0% |
| 3964449 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.76 | 65.0 | 5.27e-01 | 100.0% | 50.7% |
| 4279553 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 65.0 | 5.03e-01 | 100.0% | 44.4% |
| 5018330 | 4333.1.1.0 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain | 0.74 | 67.0 | 4.35e-01 | 100.0% | 40.3% |
| 4998597 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.74 | 65.0 | 4.89e-01 | 100.0% | 40.0% |
| 3839864 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.73 | 64.0 | 3.99e-01 | 100.0% | 18.7% |
| 3005885 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.69 | 63.0 | 4.71e-01 | 100.0% | 41.9% |
| 5032036 | 1.1.7.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_U32_C | 0.56 | 41.0 | 4.09e-01 | 80.0% | 96.2% |
| 5033373 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 41.0 | 3.95e-01 | 81.3% | 87.8% |
| 5039307 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 41.0 | 3.94e-01 | 81.3% | 87.8% |
| 4985560 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.55 | 41.0 | 4.01e-01 | 81.3% | 92.9% |
| 5018624 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 40.0 | 3.94e-01 | 78.7% | 94.0% |
| 5070918 | 1.1.7.34 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D4 | 0.55 | 41.0 | 3.57e-01 | 81.3% | 71.7% |
| 3978784 | 1.1.7.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_U32_C | 0.54 | 41.0 | 3.66e-01 | 81.3% | 74.1% |
| 4945654 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 40.0 | 3.42e-01 | 80.0% | 66.2% |
| 4942595 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 40.0 | 3.93e-01 | 80.0% | 98.8% |
| 4441475 | 1.1.2.12 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › PTAC | 0.52 | 37.0 | 3.49e-01 | 78.7% | 84.0% |
D2
medium
residues 76-142
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01420.26 best | Methylase_S | 33.8 | 5.40e-08 | 98.5% | 36.3% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zahA02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 43.0 | 3.51e-01 | 94.0% | 96.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969885 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.75 | 66.0 | 4.85e-01 | 98.5% | 38.2% |
| 4262567 | 1149.1.1.1 ↗ | alpha bundles › CRISPR-Cas system second helical domain › CRISPR-Cas system second helical domain › CRISPR-Cas system RNase C2c2 second helical domain › Cas13a_endoribonuclease | 0.53 | 43.0 | 3.15e-01 | 100.0% | 57.1% |
| 4962718 | 148.1.3.412 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF26484 | 0.51 | 38.0 | 3.53e-01 | 80.6% | 89.4% |