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IMGVR_UViG_3300021379_002009-3300021379-Ga0213864_100006864
Arc-VirIMGVR_UViG_3300021379_002009-3300021379-Ga0213864_100006864
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-40_71-196
Domain cluster:
rep: P0_An_pond3_S8_170907_scaffold_156969_prodigal-single.1__X__X__00349__D7-48_56-209
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06067.17 best | DUF932 | 103.0 | 3.00e-29 | 77.8% | 54.2% |
D2
high
residues 205-317
Domain cluster:
rep: IMGVR_UViG_3300025630_003131-3300025630-Ga0208004_100049519__D116-222
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.63 | 44.0 | 4.59e-01 | 89.4% | 77.4% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.62 | 45.0 | 5.08e-01 | 91.2% | 100.0% |
| 1zp2A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.60 | 42.0 | 4.27e-01 | 90.3% | 72.3% |
| 3tjmA02 | 1.10.1470.20 | Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 | 0.59 | 39.0 | 4.24e-01 | 92.9% | 82.2% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 42.0 | 3.47e-01 | 95.6% | 40.4% |
| 3vkgA09 | 1.20.920.30 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.57 | 46.0 | 4.32e-01 | 92.9% | 70.1% |
| 4dveA00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.56 | 47.0 | 3.97e-01 | 91.2% | 83.6% |
| 7cafA01 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.54 | 41.0 | 3.07e-01 | 78.8% | 79.6% |
| 3fnbA01 | 1.20.1440.110 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase | 0.54 | 39.0 | 3.91e-01 | 92.0% | 73.7% |
| 1bqbA02 | 1.10.390.10 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 | 0.54 | 46.0 | 4.28e-01 | 92.9% | 97.2% |
| 1x3zA03 | 1.10.1740.90 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.54 | 37.0 | 4.14e-01 | 80.5% | 93.2% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.54 | 36.0 | 3.96e-01 | 92.0% | 87.6% |
| 1f5qB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 40.0 | 3.80e-01 | 92.9% | 65.2% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 35.0 | 3.64e-01 | 100.0% | 72.8% |
| 1fafA00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.53 | 33.0 | 3.77e-01 | 82.3% | 87.3% |
| 7xv3R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 39.0 | 3.03e-01 | 78.8% | 71.6% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 33.0 | 3.42e-01 | 100.0% | 65.7% |
| 2qgaB01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.52 | 39.0 | 3.91e-01 | 84.1% | 78.1% |
| 2dlaA01 | 1.20.930.50 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.52 | 40.0 | 3.59e-01 | 82.3% | 79.4% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 34.0 | 4.01e-01 | 70.8% | 100.0% |
| 1u7kA00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.51 | 38.0 | 3.71e-01 | 100.0% | 69.5% |
| 6wk3A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 3.98e-01 | 100.0% | 73.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3596044 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.58 | 47.0 | 4.63e-01 | 100.0% | 82.5% |
| 4038757 | 604.39.1.2 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › BioY | 0.56 | 47.0 | 4.04e-01 | 91.2% | 86.1% |
| 4028744 | 4953.1.1.19 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › RIFIN | 0.56 | 42.0 | 3.81e-01 | 93.8% | 56.9% |
| 4025852 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.55 | 44.0 | 4.29e-01 | 93.8% | 78.4% |
| 3793382 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.55 | 36.0 | 3.84e-01 | 93.8% | 76.0% |
| 3216493 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.54 | 44.0 | 3.53e-01 | 95.6% | 43.0% |
| None | — | 0.53 | 39.0 | 2.45e-01 | 79.6% | 12.8% | |
| 3232315 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.52 | 45.0 | 3.37e-01 | 94.7% | 84.5% |
| 3218901 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.52 | 48.0 | 4.10e-01 | 99.1% | 70.9% |
| 3863240 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 38.0 | 3.04e-01 | 77.9% | 75.5% |
| 3742812 | 193.1.1.3 ↗ | alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › Ndc80_HEC | 0.50 | 35.0 | 3.44e-01 | 73.5% | 73.1% |
| 3484242 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.50 | 41.0 | 3.32e-01 | 90.3% | 47.4% |