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IMGVR_UViG_3300021387_005097-3300021387-Ga0223845_1015555515

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300021387_005097-3300021387-Ga0223845_1015555515 ↗
Kingdom:: archaea

Quality

69.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-49

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00037.33 best	Fer4	31.7	1.30e-07	52.2%	100.0%

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2uvfB02	2.160.20.10	Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like	0.56	47.0	2.77e-01	100.0%	26.8%
2x4lA01	3.40.50.1980	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain	0.55	37.0	2.74e-01	71.7%	93.5%
2kgfA00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.55	44.0	3.29e-01	100.0%	76.4%
1u7kA00	1.10.375.10	Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein	0.53	41.0	3.20e-01	100.0%	76.3%
4mzyA01	3.20.140.10	Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase	0.52	43.0	2.66e-01	100.0%	45.3%

ECOD (14)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5036858	205.1.1.1 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4	0.84	58.0	5.31e-01	71.7%	58.6%
5013645	205.1.1.22 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_21	0.77	56.0	5.13e-01	100.0%	60.0%
5034170	205.1.1.33 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_10	0.77	58.0	5.08e-01	82.6%	57.1%
4954288	205.1.1.131 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_9	0.70	51.0	3.77e-01	80.4%	79.2%
5015336	205.1.1.16 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7	0.69	57.0	4.10e-01	91.3%	35.2%
4932877	205.1.1.16 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7	0.68	57.0	3.93e-01	97.8%	82.3%
4943824	205.1.1.119 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Nitroreductase	0.65	51.0	4.51e-01	100.0%	58.6%
4651987	205.1.1.0 ↗	a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin	0.62	51.0	3.74e-01	97.8%	77.8%
1833953	3702.1.1.2 ↗	beta complex topology › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › Penicillin binding protein dimerisation domain › PBP_dimer_2	0.59	37.0	3.47e-01	76.1%	50.8%
3384153	206.1.1.20 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr	0.54	44.0	2.81e-01	93.5%	34.6%
4361419	101.1.2.267 ↗	alpha arrays › HTH › HTH › winged helix domain › Nse4_C	0.53	41.0	3.26e-01	95.7%	78.3%
3807532	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.52	41.0	2.42e-01	97.8%	67.2%
3921782	207.1.1.22 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6	0.51	39.0	2.60e-01	100.0%	40.4%
3586477	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.50	38.0	2.84e-01	100.0%	92.0%