←Back to structures
IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_1000007210
Arc-VirIMGVR_UViG_3300021426_000003-3300021426-Ga0224482_1000007210
Identity
- Kingdom:
- archaea
Quality
84.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-216
Domain cluster:
rep: term1_saliva_scaffold_14_prodigal-single.1__X__X__00263__D156-334
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01183.27 best | Glyco_hydro_25 | 76.3 | 5.40e-21 | 88.2% | 100.0% |
CATH (78)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2nw0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.89 | 76.0 | 8.05e-01 | 97.6% | 97.9% |
| 4kruA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.88 | 80.0 | 8.01e-01 | 99.1% | 93.0% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.87 | 80.0 | 8.24e-01 | 94.3% | 99.0% |
| 5a6sA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.85 | 75.0 | 7.86e-01 | 100.0% | 99.5% |
| 1h09A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.85 | 72.0 | 7.64e-01 | 94.8% | 97.9% |
| 2wagA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.84 | 78.0 | 7.79e-01 | 100.0% | 93.5% |
| 1jfxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.84 | 81.0 | 8.10e-01 | 100.0% | 98.2% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.84 | 77.0 | 7.87e-01 | 100.0% | 97.6% |
| 5jipA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.83 | 81.0 | 7.87e-01 | 100.0% | 95.6% |
| 4ff5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.81 | 78.0 | 7.60e-01 | 100.0% | 94.7% |
| 1jndA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.75 | 67.0 | 5.84e-01 | 93.9% | 98.7% |
| 8idpB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.74 | 66.0 | 5.59e-01 | 95.8% | 97.4% |
| 3alfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.72 | 66.0 | 5.95e-01 | 95.8% | 99.3% |
| 1itcA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.72 | 64.0 | 5.03e-01 | 92.9% | 96.2% |
| 6jqfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.71 | 62.0 | 5.15e-01 | 92.5% | 92.4% |
| 2yl8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 63.0 | 5.17e-01 | 95.3% | 89.0% |
| 3hpxA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 61.0 | 5.44e-01 | 93.4% | 85.6% |
| 3mbdA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.69 | 61.0 | 5.23e-01 | 94.8% | 93.8% |
| 1jcjA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 59.0 | 5.57e-01 | 92.5% | 80.6% |
| 3ayvD00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.67 | 59.0 | 5.66e-01 | 93.4% | 96.3% |
| 3erpA01 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.67 | 59.0 | 5.19e-01 | 92.5% | 88.0% |
| 3paoB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.67 | 57.0 | 4.98e-01 | 90.6% | 100.0% |
| 6ovqA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.67 | 59.0 | 5.18e-01 | 93.4% | 92.1% |
| 1exbA00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.67 | 58.0 | 5.00e-01 | 92.5% | 87.4% |
| 2vtfA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.66 | 58.0 | 4.92e-01 | 93.4% | 82.8% |
| 3up8A00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.66 | 58.0 | 5.26e-01 | 92.5% | 80.1% |
| 3kwsA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.66 | 59.0 | 5.49e-01 | 95.8% | 87.5% |
| 4do4A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 59.0 | 5.27e-01 | 95.3% | 96.9% |
| 4xk2B00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.66 | 57.0 | 4.98e-01 | 91.5% | 84.8% |
| 3cz8A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.65 | 57.0 | 5.41e-01 | 91.0% | 94.7% |
| 2r8wA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 58.0 | 5.14e-01 | 94.3% | 75.1% |
| 3ch0A00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.65 | 54.0 | 4.97e-01 | 87.7% | 95.2% |
| 3f4nC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.65 | 57.0 | 5.47e-01 | 93.9% | 96.3% |
| 3chvA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.64 | 58.0 | 5.25e-01 | 97.6% | 97.1% |
| 3bg3A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 55.0 | 4.81e-01 | 94.3% | 70.1% |
| 3qtgA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.63 | 56.0 | 5.37e-01 | 94.3% | 84.6% |
| 1kcxA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.61 | 56.0 | 4.58e-01 | 96.7% | 86.9% |
| 2uvaG04 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.61 | 55.0 | 4.90e-01 | 94.8% | 82.4% |
| 1xmxA01 | 3.40.50.10770 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Hypothetical protein VC1899 like domain (Restriction endonuclease-like) | 0.60 | 36.0 | 4.30e-01 | 90.6% | 87.3% |
| 5vxsA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.60 | 56.0 | 5.15e-01 | 100.0% | 91.1% |
| 4fhdA02 | 3.80.30.30 | Alpha Beta › Alpha-Beta Horseshoe › pyruvate-formate lyase- activating enzyme › | 0.60 | 47.0 | 4.66e-01 | 82.5% | 98.7% |
| 4qhrA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.60 | 50.0 | 5.13e-01 | 91.0% | 91.3% |
| 4jc8A01 | 3.40.50.2060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 | 0.59 | 35.0 | 4.21e-01 | 85.4% | 87.5% |
| 1rcqA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.59 | 50.0 | 5.11e-01 | 91.0% | 91.8% |
| 4gx0B04 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.59 | 32.0 | 3.97e-01 | 79.2% | 84.0% |
| 1xi3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 50.0 | 5.12e-01 | 94.8% | 96.5% |
| 4xc7B01 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.56 | 38.0 | 4.45e-01 | 89.2% | 99.3% |
| 3oc7A01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.56 | 39.0 | 4.26e-01 | 71.2% | 100.0% |
| 1cpyA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 48.0 | 4.10e-01 | 93.4% | 94.8% |
| 1lc5A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.55 | 40.0 | 3.97e-01 | 97.6% | 68.9% |
| 2ggsA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 44.0 | 4.47e-01 | 94.8% | 85.9% |
| 2j48A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 32.0 | 4.00e-01 | 85.8% | 99.2% |
| 1w6uD00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 4.37e-01 | 96.2% | 80.1% |
| 5b1yA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 4.64e-01 | 94.8% | 88.0% |
| 4ospD00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 4.61e-01 | 96.7% | 91.8% |
| 3rq1A02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 43.0 | 4.18e-01 | 100.0% | 75.3% |
| 1rkxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 40.0 | 4.23e-01 | 77.4% | 100.0% |
| 3o63A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 4.73e-01 | 94.8% | 94.4% |
| 3pxxD00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 49.0 | 4.49e-01 | 99.5% | 94.5% |
| 2j5bB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.53 | 38.0 | 3.99e-01 | 73.6% | 88.3% |
| 3i4jB02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 42.0 | 4.01e-01 | 100.0% | 71.1% |
| 1dpgA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 42.0 | 4.53e-01 | 84.9% | 100.0% |
| 8ouzD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 45.0 | 4.41e-01 | 92.5% | 99.6% |
| 5dn8A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 39.0 | 4.34e-01 | 100.0% | 99.4% |
| 6pznB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 47.0 | 4.57e-01 | 98.1% | 92.1% |
| 5u9cA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 42.0 | 4.21e-01 | 94.8% | 83.9% |
| 3h2gA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 46.0 | 4.20e-01 | 95.3% | 95.7% |
| 2pk3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 44.0 | 4.41e-01 | 95.3% | 87.2% |
| 3e3mA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 35.0 | 4.07e-01 | 93.9% | 99.3% |
| 3gvcA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 4.40e-01 | 96.2% | 91.4% |
| 1hxhA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 4.35e-01 | 96.7% | 92.1% |
| 4wzzA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 36.0 | 4.00e-01 | 92.0% | 93.7% |
| 1yxmC00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 4.23e-01 | 96.7% | 80.7% |
| 7arcP01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 4.14e-01 | 94.8% | 75.3% |
| 4i0wB01 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.51 | 46.0 | 4.02e-01 | 100.0% | 83.2% |
| 4isyA02 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.50 | 39.0 | 3.77e-01 | 95.8% | 69.6% |
| 6jh7B00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 46.0 | 4.35e-01 | 100.0% | 94.6% |
| 1u9jA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.50 | 44.0 | 4.25e-01 | 95.3% | 87.3% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 139515 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.89 | 76.0 | 8.07e-01 | 100.0% | 98.4% |
| 1290373 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.88 | 79.0 | 8.07e-01 | 100.0% | 94.7% |
| 1826179 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.87 | 80.0 | 7.77e-01 | 94.3% | 87.0% |
| 4009663 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.86 | 78.0 | 7.53e-01 | 100.0% | 84.7% |
| 8882 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.85 | 73.0 | 7.70e-01 | 95.8% | 97.9% |
| 3283842 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.84 | 78.0 | 7.99e-01 | 100.0% | 99.0% |
| 1284139 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.84 | 77.0 | 7.95e-01 | 100.0% | 99.5% |
| 1066802 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.81 | 78.0 | 7.60e-01 | 100.0% | 94.7% |
| 3215997 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.80 | 74.0 | 7.23e-01 | 95.3% | 91.6% |
| 3616055 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.80 | 74.0 | 7.30e-01 | 95.8% | 96.8% |
| 4378000 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.78 | 70.0 | 7.28e-01 | 94.3% | 100.0% |
| 3997482 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.74 | 64.0 | 6.76e-01 | 99.5% | 99.5% |
| 3417161 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.73 | 66.0 | 4.36e-01 | 94.8% | 44.1% |
| 4528721 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.73 | 63.0 | 5.41e-01 | 91.0% | 87.7% |
| 4095793 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.73 | 63.0 | 5.52e-01 | 91.0% | 89.2% |
| 3289647 | 2002.1.1.394 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF4015 | 0.72 | 65.0 | 5.60e-01 | 95.8% | 94.7% |
| 3447867 | 2002.1.1.19 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_17 | 0.70 | 62.0 | 5.05e-01 | 92.0% | 88.1% |
| 5059056 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 56.0 | 4.82e-01 | 92.0% | 55.6% |
| 3967165 | 2002.1.1.25 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HMGL-like | 0.68 | 60.0 | 5.23e-01 | 93.4% | 73.7% |
| None | — | 0.68 | 58.0 | 4.86e-01 | 90.6% | 91.3% | |
| None | — | 0.68 | 60.0 | 4.83e-01 | 93.4% | 60.5% | |
| 3923486 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.67 | 63.0 | 5.19e-01 | 100.0% | 96.5% |
| 4983530 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.67 | 61.0 | 5.68e-01 | 95.8% | 91.2% |
| 4934911 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.67 | 60.0 | 4.99e-01 | 94.8% | 90.3% |
| 4989502 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 53.0 | 4.19e-01 | 82.5% | 51.6% |
| 5052277 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.67 | 53.0 | 4.42e-01 | 81.6% | 79.7% |
| 3245696 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.66 | 57.0 | 5.22e-01 | 90.6% | 94.9% |
| 2410144 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.66 | 58.0 | 5.01e-01 | 93.4% | 82.1% |
| 3489932 | 2002.1.1.186 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Melibiase_2 | 0.66 | 59.0 | 5.14e-01 | 95.8% | 92.3% |
| 3289754 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.65 | 58.0 | 4.89e-01 | 94.3% | 90.4% |
| 4068376 | 2002.1.1.116 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PdxJ | 0.65 | 57.0 | 5.25e-01 | 92.9% | 97.7% |
| None | — | 0.64 | 58.0 | 4.98e-01 | 96.7% | 91.3% | |
| 4958621 | 2002.1.1.118 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › UvdE | 0.64 | 56.0 | 5.14e-01 | 93.4% | 97.8% |
| 4168928 | 2002.1.1.116 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PdxJ | 0.64 | 57.0 | 5.28e-01 | 94.3% | 91.5% |
| 4017349 | 2002.1.1.176 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PEP_mutase | 0.64 | 57.0 | 5.26e-01 | 95.3% | 80.0% |
| 4195006 | 2002.1.1.11 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK | 0.64 | 57.0 | 5.29e-01 | 94.3% | 81.2% |
| 4346674 | 2002.1.1.1 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RuBisCO_large | 0.63 | 56.0 | 4.85e-01 | 94.8% | 71.6% |
| 4857077 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.62 | 55.0 | 5.03e-01 | 94.3% | 90.7% |
| 3718053 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.61 | 55.0 | 4.82e-01 | 95.8% | 82.6% |
| 4987828 | 2002.3.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase | 0.61 | 56.0 | 4.93e-01 | 100.0% | 84.8% |
| 4578866 | 2002.1.1.52 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Peptidase_U32 | 0.61 | 53.0 | 4.60e-01 | 93.4% | 83.1% |
| 3648689 | 2002.1.1.35 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DAHP_synth_1 | 0.59 | 52.0 | 4.71e-01 | 94.8% | 87.9% |
| 4958342 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.59 | 52.0 | 4.26e-01 | 92.0% | 60.5% |
| 4950724 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.58 | 53.0 | 4.68e-01 | 99.1% | 71.1% |
| 3731703 | 7585.1.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 | 0.58 | 34.0 | 4.10e-01 | 85.4% | 87.1% |
| 4948637 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.57 | 51.0 | 4.62e-01 | 95.3% | 76.5% |
| 4976041 | 2002.1.1.13 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red | 0.56 | 49.0 | 4.72e-01 | 94.3% | 95.5% |
| 3400779 | 7579.1.1.2 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase | 0.55 | 43.0 | 3.76e-01 | 80.2% | 87.3% |
| 5051687 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.55 | 51.0 | 4.37e-01 | 100.0% | 79.4% |
| 4996947 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.55 | 49.0 | 4.17e-01 | 96.7% | 77.7% |
| 3741588 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.55 | 48.0 | 4.17e-01 | 95.3% | 84.2% |
| 4647059 | 2003.1.1.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N | 0.55 | 47.0 | 4.87e-01 | 96.2% | 98.0% |
| 4933039 | 2003.1.1.52 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › RmlD_sub_bind | 0.54 | 46.0 | 4.06e-01 | 89.2% | 93.3% |
| 3938581 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.53 | 39.0 | 4.26e-01 | 94.3% | 92.0% |
| 5000572 | 2003.1.1.52 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › RmlD_sub_bind | 0.53 | 45.0 | 4.02e-01 | 89.6% | 95.9% |
| 3191693 | 2004.1.1.128 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB | 0.53 | 46.0 | 4.15e-01 | 94.3% | 92.2% |
| 3970707 | 2486.1.1.0 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase | 0.53 | 47.0 | 4.43e-01 | 97.6% | 89.7% |
| 5001772 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.53 | 48.0 | 4.21e-01 | 96.7% | 88.5% |
| 2101392 | 2486.1.1.10 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › MdcE | 0.53 | 48.0 | 4.50e-01 | 98.1% | 88.2% |
| 4456415 | 2003.1.1.84 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PRISE | 0.53 | 46.0 | 3.80e-01 | 95.3% | 65.9% |
| 3483866 | 2004.1.1.128 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB | 0.53 | 46.0 | 4.23e-01 | 94.3% | 92.7% |
| 3586904 | 2486.1.1.20 ↗ | a/b three-layered sandwiches › ClpP/crotonase › ClpP/crotonase › ClpP/crotonase › Carboxyl_trans, MdcE | 0.52 | 47.0 | 3.53e-01 | 98.6% | 41.6% |
| 4018358 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.52 | 43.0 | 3.92e-01 | 95.3% | 64.6% |
| 3941556 | 2003.1.1.67 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_10 | 0.52 | 44.0 | 3.86e-01 | 94.8% | 59.1% |
| 4937461 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.52 | 46.0 | 4.70e-01 | 95.8% | 98.1% |
| 2526430 | 2003.1.1.69 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short_C2 | 0.52 | 47.0 | 4.40e-01 | 98.1% | 90.7% |
| 3786335 | 2004.1.1.128 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB | 0.52 | 45.0 | 4.11e-01 | 94.3% | 86.9% |
| 3796242 | 2003.1.1.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N | 0.51 | 44.0 | 4.44e-01 | 95.8% | 89.5% |
| None | — | 0.51 | 46.0 | 4.15e-01 | 99.1% | 92.3% | |
| 3589684 | 2007.5.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 | 0.51 | 47.0 | 4.63e-01 | 98.6% | 95.5% |
| 3583359 | 2003.1.1.193 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › G6PD_N, G6PD_C | 0.50 | 44.0 | 4.23e-01 | 92.5% | 83.0% |
| 4128081 | 7579.1.1.17 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S15 | 0.50 | 43.0 | 3.44e-01 | 91.0% | 92.5% |
D2
high
residues 239-395
Domain cluster:
rep: OR420741.1__WOZ55670.1__CRP118_gp39__00039__D1-140
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05257.23 best | CHAP | 48.7 | 1.20e-12 | 54.1% | 97.5% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.75 | 60.0 | 6.16e-01 | 100.0% | 86.5% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.68 | 26.0 | 4.17e-01 | 100.0% | 93.2% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.63 | 57.0 | 5.06e-01 | 100.0% | 70.4% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.62 | 57.0 | 5.07e-01 | 97.5% | 76.6% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.62 | 40.0 | 4.41e-01 | 78.3% | 80.8% |
| 3a2yA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.62 | 56.0 | 5.33e-01 | 97.5% | 92.4% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.57 | 44.0 | 4.74e-01 | 89.8% | 95.4% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 43.0 | 4.53e-01 | 93.0% | 89.4% |
| 2rhiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 30.0 | 3.44e-01 | 71.3% | 78.6% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 26.0 | 3.27e-01 | 92.4% | 79.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5063005 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.82 | 59.0 | 6.77e-01 | 100.0% | 97.5% |
| 4015238 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.73 | 56.0 | 6.20e-01 | 94.3% | 98.4% |
| 1905738 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.71 | 62.0 | 6.40e-01 | 100.0% | 96.6% |
| 5018860 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.67 | 56.0 | 5.73e-01 | 97.5% | 90.0% |
| 3389169 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 33.0 | 4.38e-01 | 77.7% | 87.1% |
| 3938389 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 32.0 | 4.11e-01 | 77.7% | 88.2% |
| 4002896 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 32.0 | 4.14e-01 | 77.7% | 87.8% |
| 3840679 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 33.0 | 4.15e-01 | 83.4% | 86.3% |
| 3883159 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.61 | 33.0 | 4.12e-01 | 86.0% | 88.9% |
| 4147056 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 35.0 | 4.18e-01 | 100.0% | 87.0% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.60 | 30.0 | 4.04e-01 | 70.7% | 89.4% |
| 3765289 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 32.0 | 4.00e-01 | 77.7% | 88.9% |
| 3768094 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.59 | 34.0 | 3.99e-01 | 98.7% | 82.9% |
| 3609629 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 31.0 | 3.79e-01 | 77.7% | 82.1% |
| 3879064 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.58 | 30.0 | 3.83e-01 | 77.7% | 85.6% |
| 3710582 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 27.0 | 3.33e-01 | 96.2% | 74.3% |
D3
high
residues 422-485
Domain cluster:
rep: MH853356.2__AYJ74955.1__X__00026__D367-446
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08239.18 best | SH3_3 | 33.4 | 5.70e-08 | 84.4% | 94.4% |
D4
high
residues 507-570
Domain cluster:
rep: MH853356.2__AYJ74955.1__X__00026__D367-446
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08239.18 best | SH3_3 | 32.2 | 1.30e-07 | 84.4% | 98.2% |
| PF07653.24 | SH3_2 | 22.2 | 1.30e-04 | 64.1% | 65.5% |