IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_10000072207

Arc-Vir

Identity

87.6 mean pLDDT

View cluster (2 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-80

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2cw7A02	1.10.10.1010	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Intein homing endonuclease, domain IV	0.59	40.0	3.31e-01	94.9%	37.7%
3lzhA02	3.90.1200.10	Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe	0.56	38.0	2.90e-01	70.5%	78.7%
2xsbA02	1.20.58.240	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1	0.51	41.0	3.38e-01	89.7%	61.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3898895	601.1.1.68 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › RHG29_45_N	0.55	45.0	4.03e-01	92.3%	75.7%
3249953	4952.1.1.2 ↗	alpha arrays › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › L-aspartase N-terminal domain-like › Lyase_aromatic	0.53	46.0	3.72e-01	100.0%	96.1%
3446288	601.4.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains	0.52	42.0	3.56e-01	92.3%	78.6%
4927178	223.1.1.6 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1	0.52	41.0	2.89e-01	88.5%	43.8%
4350103	109.2.1.7 ↗	alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › Terpene_synth	0.51	40.0	3.09e-01	88.5%	36.5%
3795608	601.1.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin	0.51	40.0	3.65e-01	92.3%	63.6%

D2 high residues 81-249

PDB

Domain cluster: rep: PHAGE-A6--js4906-27-3_S30_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00267__D2-126

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ci0J02	2.10.70.20	Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains	0.67	15.0	2.97e-01	71.0%	66.0%
1vbkA01	3.30.70.1510	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like	0.59	23.0	3.19e-01	80.5%	68.7%
2a6mA00	3.30.70.1290	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like	0.56	29.0	3.32e-01	82.2%	63.1%
2l48A00	3.30.70.2030	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.56	22.0	3.03e-01	80.5%	68.2%
2fyxA00	3.30.70.1290	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like	0.55	29.0	3.28e-01	81.7%	63.1%
6le1A01	3.30.70.330	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain	0.54	23.0	3.38e-01	89.9%	92.6%
3fi7A02	4.10.80.30	Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 6	0.54	11.0	2.84e-01	84.6%	88.9%

ECOD (4)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4555558	304.120.1.6 ↗	a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer	0.61	25.0	3.52e-01	81.1%	80.0%
5058085	3261.1.1.0 ↗	a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb	0.59	22.0	3.49e-01	91.7%	87.7%
5012054	310.3.1.0 ↗	a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related	0.52	21.0	3.09e-01	79.9%	85.7%
3587631	186.1.1.0 ↗	alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N	0.50	31.0	3.41e-01	100.0%	73.6%