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IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_1000007239
Arc-VirIMGVR_UViG_3300021426_000003-3300021426-Ga0224482_1000007239
Identity
- Kingdom:
- archaea
Quality
88.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 20-108
D2
medium
residues 288-308_366-386_445-517
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5m1pB00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.59 | 56.0 | 4.64e-01 | 100.0% | 77.8% |
D3
medium
residues 309-365_387-444_518-561
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 22.0 | 2.66e-01 | 87.4% | 49.5% |
| 3c6aA00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.59 | 55.0 | 5.11e-01 | 99.4% | 88.4% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 22.0 | 2.68e-01 | 87.4% | 50.9% |
| 7oode01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.58 | 18.0 | 2.73e-01 | 86.2% | 63.2% |
| 2p3hA00 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.56 | 19.0 | 2.41e-01 | 79.9% | 48.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3506058 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.57 | 24.0 | 3.02e-01 | 87.4% | 63.0% |
| 5035358 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.52 | 13.0 | 2.30e-01 | 73.6% | 60.0% |
| 4456820 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.52 | 23.0 | 3.14e-01 | 91.2% | 81.2% |