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IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_1000007250

Arc-Vir

IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_1000007250

Quality

95.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-63
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 60.0 4.85e-01 75.5% 54.0%
6wshA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 67.0 6.47e-01 89.8% 78.2%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 67.0 6.94e-01 89.8% 93.5%
1eyvB00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.81 55.0 3.96e-01 71.4% 29.3%
1oaiA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.81 62.0 5.87e-01 98.0% 69.5%
2dzlA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.79 60.0 5.48e-01 98.0% 62.1%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 6.27e-01 91.8% 79.3%
4gewA01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.78 58.0 5.02e-01 98.0% 51.9%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 56.0 4.77e-01 75.5% 49.3%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 5.58e-01 81.6% 69.0%
2ek5B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 4.42e-01 81.6% 40.4%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.76 57.0 4.16e-01 81.6% 34.4%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 5.36e-01 87.8% 73.2%
2jp7A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.72 54.0 5.25e-01 98.0% 71.9%
2ijlB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 57.0 4.38e-01 87.8% 47.7%
1b0uA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.69 58.0 3.74e-01 100.0% 26.0%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 58.0 5.53e-01 95.9% 79.3%
3w0lD01 1.10.8.1080 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.69 60.0 4.76e-01 100.0% 69.3%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 4.90e-01 95.9% 68.2%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 54.0 4.91e-01 87.8% 67.2%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 53.0 4.96e-01 87.8% 73.0%
1v92A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.68 49.0 5.05e-01 98.0% 84.8%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 59.0 4.91e-01 95.9% 74.4%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 4.87e-01 98.0% 68.5%
2ahoB02 1.10.150.190 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 0.67 56.0 4.73e-01 100.0% 68.1%
1yz6A02 1.10.150.190 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 0.67 57.0 4.84e-01 100.0% 70.1%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 55.0 4.94e-01 95.9% 67.1%
3hhgE01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.61e-01 95.9% 68.2%
6g1dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 4.76e-01 98.0% 74.4%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 55.0 4.56e-01 98.0% 64.8%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 50.0 4.14e-01 100.0% 48.3%
7emyA03 3.30.559.30 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain 0.63 51.0 3.26e-01 93.9% 75.6%
2a6hF01 1.20.120.1810 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.63 53.0 3.67e-01 98.0% 31.1%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.43e-01 98.0% 69.3%
1kskA01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.62 54.0 4.92e-01 98.0% 80.3%
6vvoC02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.62 48.0 4.56e-01 100.0% 71.9%
2d05A02 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.60 49.0 3.89e-01 98.0% 43.2%
1u9lB00 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.59 51.0 4.60e-01 100.0% 90.0%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 48.0 4.07e-01 100.0% 54.9%
2vixA02 1.10.150.630 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.54 46.0 3.84e-01 100.0% 58.4%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3959245 103.12.1.1 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.83 65.0 5.35e-01 83.7% 51.8%
3289310 103.12.1.1 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.83 65.0 6.24e-01 83.7% 80.0%
3287744 103.12.1.1 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.83 64.0 6.00e-01 83.7% 73.3%
4981960 103.12.1.14 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › DUF2240 0.82 66.0 6.21e-01 95.9% 73.3%
4010691 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 57.0 5.48e-01 75.5% 65.5%
3226552 148.1.3.5 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N 0.81 72.0 6.38e-01 100.0% 100.0%
5032962 103.12.1.14 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › DUF2240 0.81 69.0 6.29e-01 100.0% 71.9%
3554590 148.1.3.5 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N 0.79 69.0 5.89e-01 100.0% 65.0%
3278934 103.12.1.1 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.79 70.0 6.57e-01 98.0% 91.7%
3963328 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.79 67.0 4.24e-01 100.0% 20.4%
3952601 103.12.1.1 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR 0.79 71.0 6.24e-01 100.0% 98.6%
3470895 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.78 72.0 3.82e-01 100.0% 13.8%
3029394 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.78 67.0 6.58e-01 100.0% 88.9%
3981688 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 54.0 4.93e-01 73.5% 61.5%
5036290 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.77 67.0 6.51e-01 100.0% 96.4%
3484633 148.1.3.5 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N 0.77 66.0 5.68e-01 98.0% 86.3%
3514219 148.1.3.5 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N 0.77 67.0 5.85e-01 100.0% 72.0%
3960463 103.12.1.0 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.76 68.0 6.29e-01 100.0% 78.3%
4321867 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.76 54.0 4.81e-01 75.5% 57.1%
5030977 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.76 63.0 4.12e-01 100.0% 22.0%
3368350 148.1.3.5 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Pol_alpha_B_N 0.75 64.0 5.42e-01 98.0% 63.5%
3167740 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 63.0 5.45e-01 98.0% 68.8%
4015710 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.75 62.0 5.31e-01 98.0% 68.2%
3603989 103.12.1.0 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.75 65.0 6.48e-01 100.0% 100.0%
4012511 103.12.1.5 alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › GCR1_C 0.74 57.0 4.52e-01 83.7% 47.0%
3654733 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 63.0 5.24e-01 98.0% 83.3%
4995533 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.73 64.0 3.83e-01 100.0% 19.4%
3946248 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.73 60.0 4.63e-01 87.8% 45.0%
4642479 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.72 59.0 4.66e-01 87.8% 47.4%
4588620 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.72 57.0 4.66e-01 87.8% 50.0%
3977009 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.72 49.0 4.43e-01 73.5% 57.1%
3385513 148.1.3.238 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DUF815 0.71 60.0 6.03e-01 100.0% 96.0%
3945377 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 53.0 4.84e-01 81.6% 61.5%
3953111 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.71 56.0 4.99e-01 87.8% 62.9%
3942695 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.70 56.0 5.12e-01 87.8% 75.4%
3687318 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.70 55.0 4.54e-01 91.8% 94.7%
3971414 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.69 57.0 5.31e-01 89.8% 75.0%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 55.0 5.02e-01 87.8% 72.3%
2759 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 53.0 4.91e-01 87.8% 70.8%
3291647 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.68 59.0 4.72e-01 95.9% 51.6%
1177545 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.68 53.0 4.84e-01 87.8% 67.6%
3631122 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.68 54.0 5.47e-01 95.9% 92.0%
3966025 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.67 57.0 5.01e-01 95.9% 64.9%
3796793 108.1.1.26 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5 0.67 55.0 4.82e-01 98.0% 61.3%
3791538 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.66 54.0 4.34e-01 98.0% 44.5%
4030795 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.66 56.0 4.70e-01 95.9% 68.2%
4665959 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.66 55.0 5.21e-01 98.0% 88.3%
3948900 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.65 52.0 4.50e-01 87.8% 61.3%
3962390 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.65 54.0 3.68e-01 100.0% 32.1%
4282037 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.65 55.0 4.54e-01 95.9% 53.3%
4585171 103.1.1.6 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.63 54.0 5.27e-01 98.0% 87.3%
4296281 2004.1.1.5 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.63 51.0 3.32e-01 100.0% 24.1%
5079736 102.3.1.1 alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha 0.62 50.0 4.55e-01 100.0% 81.3%
3716291 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.60 51.0 4.21e-01 95.9% 80.0%
4029834 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 42.0 3.86e-01 98.0% 86.7%
5011282 2004.1.1.76 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 0.54 43.0 2.67e-01 100.0% 22.7%
D2 medium residues 64-127
PDB
CATH (49)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vpvA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 54.0 4.75e-01 98.4% 59.6%
2wfpA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 51.0 4.47e-01 95.3% 54.1%
2qnkA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 51.0 3.32e-01 96.9% 18.5%
3lwcA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 50.0 4.35e-01 96.9% 51.5%
7zvmA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 52.0 4.45e-01 98.4% 53.9%
3fjsC00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 51.0 4.32e-01 96.9% 50.5%
2gu9A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 54.0 4.60e-01 96.9% 56.3%
1qwrA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 50.0 4.49e-01 95.3% 59.6%
2ozjA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 51.0 4.28e-01 96.9% 50.5%
1v70A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 52.0 4.45e-01 98.4% 54.3%
3d82A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 50.0 4.30e-01 96.9% 52.9%
3myxA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 49.0 4.06e-01 96.9% 46.1%
2pytA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 46.0 3.79e-01 96.9% 40.6%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 53.0 4.43e-01 96.9% 80.3%
6nwmA01 2.60.120.280 Mainly Beta › Sandwich › Jelly Rolls › Regulatory protein AraC 0.63 49.0 3.73e-01 98.4% 35.5%
1fu0A00 3.30.1340.10 Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like 0.62 54.0 4.95e-01 100.0% 80.5%
1y9qA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.62 49.0 4.38e-01 96.9% 61.3%
3gmgA00 3.30.70.1880 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function DUF881 0.61 53.0 4.18e-01 100.0% 53.8%
3h8uA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 49.0 4.00e-01 96.9% 46.7%
4n2kA01 2.60.40.1860 Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, N-terminal domain 0.60 50.0 4.20e-01 100.0% 52.1%
1xv2C01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.60 52.0 4.38e-01 100.0% 69.4%
1b23P03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 41.0 3.62e-01 71.9% 81.9%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 3.74e-01 100.0% 49.2%
2q30A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 47.0 4.27e-01 96.9% 64.8%
4bt2A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.59 50.0 4.21e-01 100.0% 67.5%
1i5pA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 51.0 3.85e-01 100.0% 55.1%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.58 44.0 4.08e-01 87.5% 100.0%
4jcwA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.58 49.0 4.23e-01 96.9% 100.0%
1vj2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 51.0 4.20e-01 98.4% 66.7%
6v55A01 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.57 49.0 4.16e-01 100.0% 63.4%
3i7dA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 46.0 3.58e-01 98.4% 38.2%
2lyvA02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 43.0 3.76e-01 98.4% 54.1%
1vajA02 3.30.1490.150 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Hypothetical protein ph0010; domain 2 0.56 44.0 4.31e-01 92.2% 100.0%
5f7qC02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 38.0 2.86e-01 71.9% 94.7%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.55 39.0 3.33e-01 76.6% 100.0%
3vi3B02 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.55 49.0 3.79e-01 100.0% 62.5%
2ki8A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.55 45.0 3.70e-01 93.8% 88.0%
2mngA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 46.0 3.76e-01 100.0% 62.6%
2g9gA00 2.60.120.1020 Mainly Beta › Sandwich › Jelly Rolls › PAW domain 0.54 47.0 3.43e-01 100.0% 41.8%
2d93A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 46.0 3.62e-01 96.9% 45.5%
2nq3A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.54 39.0 3.11e-01 78.1% 57.3%
3kwuA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 40.0 3.22e-01 82.8% 87.4%
1k0eB00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.53 37.0 2.31e-01 73.4% 87.9%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.53 41.0 3.94e-01 85.9% 93.3%
5hr9A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 37.0 3.25e-01 78.1% 73.8%
2dewX02 2.60.40.1700 Mainly Beta › Sandwich › Immunoglobulin-like › Protein-arginine deiminase, central domain 0.52 43.0 3.38e-01 100.0% 44.7%
2zuoA09 2.30.30.570 Mainly Beta › Roll › SH3 type barrels. › 0.52 38.0 3.84e-01 79.7% 98.4%
7eu1A02 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.51 39.0 3.26e-01 90.6% 80.6%
1loxA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.50 36.0 3.13e-01 79.7% 61.3%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4649270 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.73 47.0 4.62e-01 79.7% 61.4%
4032200 10.12.1.63 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MPI_cupin_dom 0.72 55.0 4.82e-01 95.3% 55.8%
3215715 10.12.1.5 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C 0.68 54.0 4.52e-01 96.9% 50.9%
3958568 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.67 51.0 4.26e-01 96.9% 46.5%
3955052 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.67 52.0 4.37e-01 96.9% 49.1%
4346022 4111.1.1.1 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AAL_decarboxy 0.67 57.0 3.88e-01 98.4% 48.6%
3997163 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.67 52.0 4.70e-01 96.9% 61.8%
3618626 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.66 51.0 4.57e-01 96.9% 60.0%
4074950 10.12.1.63 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MPI_cupin_dom 0.65 50.0 4.47e-01 95.3% 58.9%
1030908 10.12.1.63 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MPI_cupin_dom 0.65 50.0 4.47e-01 95.3% 58.9%
5051145 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.65 50.0 4.20e-01 96.9% 49.1%
3978801 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.64 55.0 5.09e-01 98.4% 80.0%
4025507 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.64 52.0 4.96e-01 98.4% 76.0%
3941636 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.64 53.0 4.40e-01 98.4% 51.3%
4936740 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.63 47.0 4.65e-01 93.8% 74.3%
4103307 322.1.1.1 a+b two layers › HPr-like › HPr-like › HPr-like › PTS-HPr 0.63 54.0 4.97e-01 98.4% 80.0%
3287407 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.63 49.0 4.38e-01 96.9% 58.9%
4942033 10.12.1.98 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MannoseP_isomer 0.63 49.0 4.13e-01 96.9% 49.1%
3587816 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.62 49.0 4.25e-01 98.4% 54.3%
5017936 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.61 51.0 4.19e-01 98.4% 51.3%
6452 4111.1.1.1 a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AAL_decarboxy 0.60 51.0 4.84e-01 96.9% 97.4%
4010358 10.12.1.32 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › EutQ 0.60 45.0 3.60e-01 96.9% 37.2%
3985230 10.12.1.63 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › MPI_cupin_dom 0.60 46.0 4.14e-01 93.8% 60.0%
3957537 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.60 51.0 4.33e-01 98.4% 58.1%
2475381 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.59 49.0 3.44e-01 92.2% 77.0%
4540843 4.1.1.434 beta barrels › SH3 › SH3 › SH3 › DUF2642 0.59 45.0 4.48e-01 82.8% 95.4%
3590768 884.1.1.1 a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C 0.58 50.0 4.51e-01 98.4% 82.2%
3329474 219.1.1.3 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.58 48.0 3.06e-01 96.9% 52.3%
4992255 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.58 40.0 4.07e-01 73.4% 72.3%
5014791 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 51.0 4.18e-01 100.0% 55.0%
5018960 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.58 47.0 3.86e-01 98.4% 47.2%
5067107 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.58 47.0 4.34e-01 92.2% 98.8%
None 0.57 51.0 4.02e-01 98.4% 55.4%
5050320 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.57 43.0 4.16e-01 82.8% 90.7%
4805066 10.4.1.1 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.57 49.0 4.21e-01 100.0% 65.7%
4044269 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.57 41.0 4.06e-01 78.1% 94.3%
4122447 12.1.1.24 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Malt_amylase_C 0.57 45.0 4.03e-01 89.1% 100.0%
150954 10.12.1.32 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › EutQ 0.56 50.0 4.02e-01 100.0% 57.9%
5002088 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 43.0 4.05e-01 82.8% 87.5%
4941104 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.56 47.0 4.30e-01 96.9% 84.4%
3573728 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.56 49.0 4.03e-01 100.0% 59.2%
4281699 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.48e-01 93.8% 100.0%
4960962 10.11.1.0 beta sandwiches › jelly-roll › Thiamin pyrophosphokinase, substrate-binding domain › Thiamin pyrophosphokinase, substrate-binding domain 0.56 47.0 4.37e-01 100.0% 81.2%
5008249 304.131.1.0 a+b two layers › Alpha-beta plaits › Phosphonoacetate hydrolase insertion domain › Phosphonoacetate hydrolase insertion domain 0.56 49.0 3.87e-01 100.0% 66.7%
5081442 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.56 43.0 4.21e-01 84.4% 98.6%
4965211 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.56 46.0 3.92e-01 98.4% 53.9%
3579556 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.56 46.0 3.52e-01 100.0% 49.7%
3212270 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.56 43.0 3.56e-01 96.9% 45.8%
3898062 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.55 41.0 3.00e-01 78.1% 48.0%
3617798 10.32.1.229 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27640 0.55 47.0 3.87e-01 100.0% 56.0%
4432348 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 47.0 4.62e-01 96.9% 94.1%
5070959 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.54 45.0 4.11e-01 100.0% 82.1%
4078162 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.16e-01 90.6% 100.0%
5032036 1.1.7.36 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_U32_C 0.54 43.0 4.07e-01 92.2% 100.0%
3474332 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.54 40.0 3.03e-01 79.7% 54.8%
3258358 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.53 44.0 3.67e-01 96.9% 62.4%
5002737 1.16.1.0 beta barrels › cradle loop barrel › Baseplate wedge protein gp6 domain I › Baseplate wedge protein gp6 domain I 0.53 37.0 3.48e-01 75.0% 80.0%
5024895 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 44.0 4.22e-01 92.2% 81.3%
2554619 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.52 38.0 2.50e-01 82.8% 54.3%
3945834 1.1.7.79 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND 0.52 43.0 3.88e-01 100.0% 99.0%
3638315 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.52 44.0 3.29e-01 100.0% 56.8%
4944045 4.17.1.2 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.51 39.0 3.82e-01 84.4% 98.6%
3572890 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 37.0 2.88e-01 79.7% 62.7%
3706733 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.50 41.0 3.35e-01 96.9% 60.0%