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IMGVR_UViG_3300021431_004272-3300021431-Ga0224423_100297304
Arc-VirIMGVR_UViG_3300021431_004272-3300021431-Ga0224423_100297304
Identity
- Kingdom:
- archaea
Quality
89.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-168
Domain cluster:
rep: AM157364.1__CAJ43153.1__X__00002__D152-330
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y88A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.71 | 50.0 | 5.64e-01 | 99.4% | 93.6% |
| 2o3rA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 41.0 | 4.67e-01 | 100.0% | 79.8% |
| 2p14A00 | 3.40.91.50 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.67 | 48.0 | 4.63e-01 | 99.4% | 65.1% |
| 1j24A00 | 3.40.50.10130 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 42.0 | 4.69e-01 | 97.6% | 78.9% |
| 3ijmA00 | 3.90.1570.20 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.64 | 47.0 | 4.99e-01 | 100.0% | 86.3% |
| 5xc5A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 46.0 | 4.64e-01 | 100.0% | 82.0% |
| 2ymbA00 | 3.30.870.30 | Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › MITD, C-terminal phospholipase D-like domain | 0.57 | 35.0 | 3.68e-01 | 82.5% | 65.4% |
| 2hxsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 45.0 | 4.48e-01 | 100.0% | 78.1% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 38.0 | 3.53e-01 | 95.2% | 53.4% |
| 1sdoA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.56 | 46.0 | 4.43e-01 | 100.0% | 76.0% |
| 1udxA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 45.0 | 4.46e-01 | 100.0% | 81.0% |
| 4k7jA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.55 | 45.0 | 4.10e-01 | 100.0% | 64.2% |
| 5lqdA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 36.0 | 3.36e-01 | 95.2% | 52.2% |
| 5jioA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 36.0 | 3.40e-01 | 97.0% | 53.6% |
| 8a57D02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 43.0 | 4.09e-01 | 100.0% | 73.3% |
| 2pjsA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.53 | 29.0 | 3.57e-01 | 78.9% | 84.3% |
| 1dmuA00 | 3.40.600.20 | Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › Restriction endonuclease BglI | 0.52 | 47.0 | 3.92e-01 | 100.0% | 71.6% |
| 3pztB00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 42.0 | 3.48e-01 | 98.2% | 48.3% |
| 2pbeA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.52 | 31.0 | 3.48e-01 | 88.0% | 75.0% |
| 5bjuA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 43.0 | 3.52e-01 | 90.4% | 83.3% |
| 3fg9C01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 32.0 | 3.46e-01 | 83.7% | 72.9% |
| 3fcdB00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 34.0 | 3.93e-01 | 100.0% | 94.1% |
| 3ec1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 41.0 | 4.11e-01 | 100.0% | 84.6% |
| 6tmvB01 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.51 | 31.0 | 3.21e-01 | 92.2% | 62.5% |
| 1to3A00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 44.0 | 3.69e-01 | 95.8% | 70.8% |
| 3rheA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 34.0 | 4.02e-01 | 98.2% | 100.0% |
| 3outA01 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.50 | 29.0 | 3.05e-01 | 74.7% | 58.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3972599 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.85 | 70.0 | 7.29e-01 | 99.4% | 91.6% |
| 4998161 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.73 | 54.0 | 5.61e-01 | 99.4% | 81.3% |
| 4946571 | 2008.1.1.85 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › RE_TdeIII | 0.72 | 52.0 | 4.84e-01 | 100.0% | 60.5% |
| 3713471 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 34.0 | 4.55e-01 | 70.5% | 97.6% |
| 136499 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 47.0 | 4.99e-01 | 100.0% | 86.3% |
| 3410655 | 2004.1.1.222 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RhoGAP_pG1_pG2 | 0.63 | 46.0 | 4.75e-01 | 100.0% | 78.1% |
| 3182836 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 50.0 | 4.97e-01 | 100.0% | 80.6% |
| 1214742 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.62 | 27.0 | 3.39e-01 | 77.7% | 63.5% |
| 4001806 | 2005.1.1.36 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › SLC12 | 0.62 | 36.0 | 3.56e-01 | 87.3% | 52.6% |
| 4251513 | 2008.1.1.156 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29906 | 0.62 | 46.0 | 4.64e-01 | 98.8% | 76.5% |
| 3506045 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 42.0 | 4.07e-01 | 88.0% | 62.2% |
| 3711174 | 7516.1.1.21 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_transf_64 | 0.61 | 37.0 | 3.00e-01 | 90.4% | 30.6% |
| 4882455 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.60 | 43.0 | 4.16e-01 | 98.2% | 65.4% |
| 3600815 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 45.0 | 4.29e-01 | 98.2% | 66.0% |
| 3289887 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.59 | 26.0 | 3.70e-01 | 77.7% | 96.9% |
| 3999585 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.57 | 46.0 | 4.42e-01 | 100.0% | 74.6% |
| 3471542 | 7585.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins | 0.57 | 43.0 | 4.73e-01 | 98.8% | 97.0% |
| 3740687 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 48.0 | 3.89e-01 | 92.2% | 80.0% |
| 4104978 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.56 | 44.0 | 4.28e-01 | 100.0% | 73.5% |
| 3923356 | 300.1.1.9 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › MIT_C | 0.56 | 38.0 | 3.73e-01 | 91.0% | 63.4% |
| 3740966 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.56 | 37.0 | 3.47e-01 | 97.0% | 52.7% |
| 3488253 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.56 | 45.0 | 4.14e-01 | 100.0% | 65.6% |
| 3707030 | 7512.1.1.32 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_4 | 0.56 | 40.0 | 3.45e-01 | 97.0% | 46.0% |
| 3391587 | 300.1.1.9 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › MIT_C | 0.56 | 38.0 | 3.83e-01 | 91.6% | 67.9% |
| 3614550 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 51.0 | 4.44e-01 | 100.0% | 83.5% |
| 3792797 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.56 | 32.0 | 3.29e-01 | 77.1% | 56.9% |
| 4447742 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.55 | 43.0 | 3.93e-01 | 98.2% | 61.4% |
| 3681835 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.55 | 48.0 | 3.52e-01 | 94.0% | 59.1% |
| 3651717 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.55 | 39.0 | 3.34e-01 | 99.4% | 44.0% |
| 2070988 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.54 | 37.0 | 3.40e-01 | 99.4% | 49.8% |
| 3703007 | 7574.1.1.2 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › E1_dh | 0.54 | 49.0 | 3.54e-01 | 99.4% | 48.5% |
| 3175624 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.54 | 49.0 | 4.37e-01 | 99.4% | 87.0% |
| 3449870 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.53 | 37.0 | 3.20e-01 | 99.4% | 44.2% |
| 3170548 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.53 | 36.0 | 3.23e-01 | 99.4% | 47.2% |
| 5059444 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.53 | 37.0 | 3.86e-01 | 93.4% | 77.3% |
| 3972552 | 7529.1.1.1 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro | 0.53 | 41.0 | 4.18e-01 | 98.2% | 83.0% |
| 4969423 | 2002.3.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase | 0.50 | 40.0 | 3.46e-01 | 85.5% | 83.0% |