←Back to structures
IMGVR_UViG_3300021471_000162-3300021471-Ga0190359_100030261
Arc-VirIMGVR_UViG_3300021471_000162-3300021471-Ga0190359_100030261
Identity
- Kingdom:
- archaea
Quality
84.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-100
Domain cluster:
rep: conserved_putative_transcription_initiation_factor_TFIIB__YP_009094692__Melbournevirus__1560514__D168-259
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c9bA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.87 | 75.0 | 7.11e-01 | 100.0% | 78.3% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.86 | 74.0 | 7.27e-01 | 100.0% | 85.6% |
| 1aisB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.84 | 74.0 | 7.24e-01 | 100.0% | 85.9% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.84 | 73.0 | 7.29e-01 | 100.0% | 89.4% |
| 2w9zA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.81 | 75.0 | 6.52e-01 | 100.0% | 72.9% |
| 4bbrM00 | 1.10.472.170 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › | 0.80 | 68.0 | 5.25e-01 | 100.0% | 43.5% |
| 1g3nC01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.79 | 72.0 | 6.50e-01 | 100.0% | 74.2% |
| 2b9rA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.79 | 67.0 | 5.74e-01 | 100.0% | 59.3% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.79 | 73.0 | 6.93e-01 | 100.0% | 87.7% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.79 | 69.0 | 6.79e-01 | 100.0% | 88.5% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.78 | 68.0 | 6.59e-01 | 100.0% | 84.5% |
| 2i53A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.76 | 71.0 | 6.00e-01 | 100.0% | 67.1% |
| 2ivxB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.74 | 69.0 | 5.91e-01 | 100.0% | 72.9% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 61.0 | 5.63e-01 | 100.0% | 71.3% |
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 68.0 | 5.94e-01 | 100.0% | 75.8% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.73 | 66.0 | 6.15e-01 | 100.0% | 78.9% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.73 | 46.0 | 5.23e-01 | 75.0% | 86.6% |
| 1f5qB01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.72 | 65.0 | 6.10e-01 | 100.0% | 82.6% |
| 7jv7B01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.70 | 64.0 | 5.48e-01 | 100.0% | 68.5% |
| 2lfwA01 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.69 | 58.0 | 5.06e-01 | 93.5% | 80.9% |
| 2azjA00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.68 | 60.0 | 4.30e-01 | 100.0% | 65.2% |
| 4krdB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.68 | 61.0 | 4.81e-01 | 100.0% | 71.1% |
| 3n3dB00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.67 | 60.0 | 4.17e-01 | 100.0% | 57.5% |
| 2pmiB00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.67 | 61.0 | 4.63e-01 | 100.0% | 55.9% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.66 | 50.0 | 5.35e-01 | 83.7% | 91.4% |
| 3sdgA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 30.0 | 4.03e-01 | 96.7% | 95.2% |
| 2zttA00 | 6.10.140.720 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 42.0 | 4.62e-01 | 87.0% | 86.3% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.62 | 54.0 | 4.77e-01 | 96.7% | 84.8% |
| 1tzvA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.62 | 54.0 | 4.70e-01 | 96.7% | 83.7% |
| 2k3qA00 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.61 | 48.0 | 4.49e-01 | 87.0% | 75.4% |
| 1fc3B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 45.0 | 4.43e-01 | 79.3% | 89.1% |
| 6kd7A00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.60 | 52.0 | 3.64e-01 | 100.0% | 57.8% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.59 | 41.0 | 4.41e-01 | 76.1% | 86.8% |
| 2wb0X01 | 1.10.269.10 | Mainly Alpha › Orthogonal Bundle › Adenovirus Single-stranded Dna-binding Protein, domain 1 › Adenovirus DNA-binding, N-terminal domain | 0.58 | 42.0 | 3.94e-01 | 76.1% | 64.1% |
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.58 | 32.0 | 2.92e-01 | 95.7% | 38.1% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.57 | 50.0 | 4.45e-01 | 98.9% | 91.0% |
| 4uobA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.57 | 42.0 | 3.86e-01 | 90.2% | 58.7% |
| 1gxyA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.54 | 45.0 | 3.50e-01 | 94.6% | 70.4% |
| 3bniB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.53 | 38.0 | 3.16e-01 | 75.0% | 67.8% |
| 1paqA00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 48.0 | 3.99e-01 | 100.0% | 61.5% |
| 8fbcA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 40.0 | 2.71e-01 | 82.6% | 64.1% |
| 6hwjA01 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.52 | 46.0 | 3.44e-01 | 100.0% | 46.3% |
| 1dpsA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 42.0 | 3.58e-01 | 90.2% | 79.2% |
| 2jexA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.51 | 36.0 | 3.54e-01 | 71.7% | 77.1% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.50 | 42.0 | 4.24e-01 | 97.8% | 93.3% |
| 2ihyA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 40.0 | 3.00e-01 | 97.8% | 33.1% |
| 3d19B00 | 1.20.1260.120 | Mainly Alpha › Up-down Bundle › Ferritin › Protein of unknown function DUF2935 | 0.50 | 40.0 | 2.92e-01 | 87.0% | 39.7% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001331 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.87 | 82.0 | 7.55e-01 | 100.0% | 88.7% |
| 4956629 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.86 | 75.0 | 6.97e-01 | 100.0% | 76.4% |
| 3433370 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.84 | 75.0 | 7.53e-01 | 100.0% | 92.6% |
| 3639001 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.84 | 74.0 | 6.31e-01 | 100.0% | 61.4% |
| 3655226 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.84 | 73.0 | 6.33e-01 | 100.0% | 63.0% |
| 3511544 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.83 | 73.0 | 6.19e-01 | 100.0% | 59.3% |
| 4948165 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.83 | 77.0 | 7.21e-01 | 100.0% | 95.5% |
| 5036215 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.82 | 76.0 | 7.13e-01 | 100.0% | 95.5% |
| 5042712 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.81 | 75.0 | 7.16e-01 | 100.0% | 93.3% |
| 3422657 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.81 | 75.0 | 6.93e-01 | 100.0% | 82.6% |
| 3273891 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.79 | 70.0 | 6.37e-01 | 100.0% | 72.5% |
| 3622768 | 101.1.10.13 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF3452 | 0.79 | 72.0 | 6.67e-01 | 100.0% | 79.1% |
| 3358229 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.79 | 73.0 | 6.74e-01 | 100.0% | 80.0% |
| 3647107 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.79 | 67.0 | 6.26e-01 | 100.0% | 75.5% |
| 3833444 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.79 | 66.0 | 6.06e-01 | 100.0% | 70.0% |
| 5064398 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.78 | 67.0 | 6.51e-01 | 100.0% | 84.0% |
| 3767388 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.78 | 68.0 | 6.12e-01 | 100.0% | 69.6% |
| 3824951 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.78 | 70.0 | 6.93e-01 | 100.0% | 93.7% |
| 3488467 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.78 | 72.0 | 6.61e-01 | 100.0% | 82.6% |
| 4485423 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.78 | 68.0 | 6.20e-01 | 100.0% | 72.5% |
| 3330762 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.77 | 66.0 | 6.07e-01 | 100.0% | 72.2% |
| 3255346 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.77 | 72.0 | 6.35e-01 | 100.0% | 77.7% |
| 3431012 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.77 | 71.0 | 6.90e-01 | 100.0% | 94.0% |
| 3605109 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.77 | 71.0 | 5.87e-01 | 100.0% | 77.4% |
| 3434992 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.76 | 68.0 | 6.77e-01 | 100.0% | 92.6% |
| 5025027 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.76 | 68.0 | 6.03e-01 | 100.0% | 69.6% |
| 5053842 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.76 | 63.0 | 5.93e-01 | 100.0% | 74.5% |
| 3443564 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.76 | 71.0 | 5.77e-01 | 100.0% | 65.0% |
| 3909225 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.76 | 69.0 | 6.49e-01 | 100.0% | 87.3% |
| 3783948 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.74 | 67.0 | 5.87e-01 | 98.9% | 75.6% |
| 5022190 | 101.1.10.83 ↗ | alpha arrays › HTH › HTH › Cyclin-like › DUF6398 | 0.73 | 67.0 | 6.03e-01 | 100.0% | 73.6% |
| 3568720 | 101.1.10.17 ↗ | alpha arrays › HTH › HTH › Cyclin-like › CycT2-like_C | 0.73 | 67.0 | 6.41e-01 | 100.0% | 93.3% |
| 3166681 | 101.1.10.22 ↗ | alpha arrays › HTH › HTH › Cyclin-like › ORC6 | 0.72 | 65.0 | 6.25e-01 | 100.0% | 96.2% |
| 3172088 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.71 | 65.0 | 5.40e-01 | 100.0% | 72.3% |
| 3937336 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.70 | 62.0 | 5.76e-01 | 100.0% | 78.3% |
| 3648643 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.70 | 64.0 | 6.36e-01 | 100.0% | 96.8% |
| 3708827 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.68 | 62.0 | 5.02e-01 | 100.0% | 75.3% |
| 3302992 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.68 | 62.0 | 4.90e-01 | 100.0% | 69.2% |
| 3716640 | 101.1.10.9 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin | 0.67 | 61.0 | 4.76e-01 | 100.0% | 67.4% |
| 3901205 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.66 | 57.0 | 5.35e-01 | 100.0% | 79.1% |
| 3711858 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.64 | 57.0 | 5.16e-01 | 100.0% | 93.6% |
| 3735339 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.57 | 41.0 | 3.04e-01 | 76.1% | 89.4% |
| 4102879 | 604.12.1.76 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › IspA | 0.55 | 38.0 | 4.08e-01 | 70.7% | 93.8% |
| 5029091 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.53 | 37.0 | 2.88e-01 | 72.8% | 84.4% |
| 3749164 | 150.3.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Hormone_1 | 0.52 | 44.0 | 3.48e-01 | 93.5% | 65.0% |
| 3978753 | 3759.1.1.1 ↗ | alpha arrays › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antitermination protein Q helical domain › Antiterm | 0.52 | 40.0 | 3.61e-01 | 82.6% | 59.2% |
| 4987735 | 601.1.2.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) | 0.51 | 41.0 | 3.80e-01 | 87.0% | 87.8% |
| 5030872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 38.0 | 3.42e-01 | 80.4% | 67.7% |
| 3956181 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.50 | 38.0 | 3.44e-01 | 83.7% | 87.4% |