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IMGVR_UViG_3300021472_000035-3300021472-Ga0190363_10040508
Arc-VirIMGVR_UViG_3300021472_000035-3300021472-Ga0190363_10040508
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-109
Domain cluster:
rep: IMGVR_UViG_3300002966_001123-3300002966-JGI24721J44947_1000100522__D3-109
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.80 | 48.0 | 5.49e-01 | 76.9% | 79.5% |
| 1wfwA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 36.0 | 4.20e-01 | 74.1% | 93.2% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.56 | 35.0 | 3.71e-01 | 74.1% | 69.1% |
| 3mcaB01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.56 | 37.0 | 3.96e-01 | 80.6% | 77.1% |
| 1b33N01 | 3.30.1490.170 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Allophycocyanin linker chain (domain) | 0.56 | 29.0 | 3.87e-01 | 72.2% | 98.2% |
| 3qldA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.54 | 40.0 | 3.56e-01 | 76.9% | 95.4% |
| 6mfaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 29.0 | 3.36e-01 | 76.9% | 72.2% |
| 2dhjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 38.0 | 3.63e-01 | 74.1% | 76.0% |
| 4i86A00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.53 | 28.0 | 2.95e-01 | 72.2% | 53.9% |
| 2dtcA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 36.0 | 3.61e-01 | 73.1% | 84.5% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.51 | 34.0 | 3.40e-01 | 76.9% | 66.1% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5031673 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 70.0 | 7.13e-01 | 98.1% | 95.2% |
| 3907190 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.73 | 53.0 | 5.69e-01 | 93.5% | 85.3% |
| 4063634 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.70 | 55.0 | 5.21e-01 | 93.5% | 71.0% |
| 4674170 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.69 | 53.0 | 5.17e-01 | 92.6% | 72.5% |
| 3394789 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 61.0 | 6.12e-01 | 100.0% | 95.5% |
| 3815495 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 41.0 | 4.90e-01 | 75.0% | 92.9% |
| 3826751 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.65 | 41.0 | 4.67e-01 | 76.9% | 85.0% |
| 3373583 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.63 | 39.0 | 4.70e-01 | 76.9% | 95.7% |
| 3707345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 44.0 | 4.81e-01 | 73.1% | 100.0% |
| 3862470 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 56.0 | 5.40e-01 | 100.0% | 92.5% |
| 3842362 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.60 | 48.0 | 5.13e-01 | 85.2% | 97.9% |
| 5050716 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.60 | 42.0 | 3.93e-01 | 79.6% | 58.5% |
| 3530891 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 51.0 | 5.12e-01 | 96.3% | 92.7% |
| 3427504 | 4.1.1.150 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3123 | 0.58 | 37.0 | 4.42e-01 | 72.2% | 100.0% |
| 3700518 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.56 | 44.0 | 4.12e-01 | 82.4% | 77.7% |
| 4943576 | 4.23.1.0 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like | 0.55 | 43.0 | 4.08e-01 | 81.5% | 80.0% |
| 4932514 | 4.23.1.2 ↗ | beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 | 0.54 | 42.0 | 4.06e-01 | 81.5% | 80.8% |
| 3397439 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 39.0 | 3.75e-01 | 75.0% | 83.2% |
| 3496126 | 4.25.1.0 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain | 0.54 | 39.0 | 4.28e-01 | 77.8% | 93.2% |
| 4995896 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 39.0 | 3.69e-01 | 80.6% | 85.4% |
| 3619357 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.51 | 36.0 | 3.24e-01 | 73.1% | 71.6% |
| 3184015 | 10.1.1.22 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF1349 | 0.50 | 38.0 | 3.03e-01 | 81.5% | 74.2% |