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IMGVR_UViG_3300021472_000137-3300021472-Ga0190363_10003649

Arc-Vir

IMGVR_UViG_3300021472_000137-3300021472-Ga0190363_10003649

Quality

81.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-47
PDB
Domain cluster: representative
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r4qA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.78 51.0 3.60e-01 81.8% 22.7%
8aa0E01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.77 66.0 3.96e-01 100.0% 15.4%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.77 66.0 3.96e-01 100.0% 15.4%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 60.0 5.33e-01 100.0% 61.3%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 52.0 4.31e-01 90.9% 43.6%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.72 53.0 3.84e-01 90.9% 28.5%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 52.0 4.88e-01 90.9% 62.5%
3zxjA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.72 62.0 3.70e-01 100.0% 17.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 52.0 4.70e-01 97.7% 56.5%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 54.0 4.94e-01 97.7% 62.3%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.71 54.0 5.14e-01 95.5% 70.4%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 58.0 4.46e-01 100.0% 77.7%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 56.0 4.26e-01 100.0% 58.6%
2x8fA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 55.0 3.37e-01 100.0% 13.5%
3mx7A00 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.67 49.0 4.04e-01 97.7% 41.1%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 57.0 4.41e-01 100.0% 80.4%
5cfvA01 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.66 58.0 4.36e-01 100.0% 78.5%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.66 57.0 3.57e-01 100.0% 63.7%
4xchA00 3.30.1360.80 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) 0.66 55.0 3.85e-01 97.7% 52.3%
3c4bA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 51.0 4.55e-01 100.0% 59.7%
1ub1A00 3.30.890.10 Alpha Beta › 2-Layer Sandwich › Methyl-cpg-binding Protein 2; Chain A › Methyl-cpg-binding Protein 2; Chain A 0.64 52.0 3.78e-01 90.9% 32.8%
3a7fA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 55.0 4.37e-01 100.0% 80.6%
3kulA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 50.0 4.25e-01 100.0% 86.5%
1dx5M02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 40.0 2.97e-01 88.6% 21.8%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.63 48.0 4.53e-01 100.0% 66.7%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 52.0 4.49e-01 100.0% 62.7%
3dsmA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 49.0 2.97e-01 100.0% 12.5%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 52.0 4.13e-01 100.0% 79.8%
1o20A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.62 46.0 2.92e-01 86.4% 64.2%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 52.0 3.96e-01 100.0% 74.5%
2qruA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.62 49.0 3.04e-01 88.6% 61.0%
3vz9B00 3.30.457.50 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 0.61 51.0 4.01e-01 100.0% 74.8%
6krwA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.61 51.0 3.15e-01 100.0% 23.6%
7esdB01 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 48.0 4.00e-01 97.7% 81.5%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 44.0 3.91e-01 95.5% 53.7%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.60 45.0 4.32e-01 95.5% 70.4%
8ciwA02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.59 41.0 3.06e-01 77.3% 25.6%
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.59 48.0 3.47e-01 100.0% 42.8%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.59 40.0 3.83e-01 88.6% 57.1%
5jowA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 46.0 3.10e-01 100.0% 21.0%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.58 44.0 3.64e-01 86.4% 47.7%
4wiwA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 43.0 3.82e-01 84.1% 58.0%
1attA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.58 47.0 3.42e-01 100.0% 85.7%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.56 43.0 3.74e-01 100.0% 51.9%
4a7kA03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 42.0 3.07e-01 93.2% 77.8%
5z3gZ01 3.30.390.110 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.56 44.0 3.36e-01 97.7% 38.7%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.55 44.0 3.63e-01 97.7% 47.8%
2qyvA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.55 45.0 2.87e-01 97.7% 44.1%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 42.0 3.48e-01 100.0% 47.6%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 43.0 3.24e-01 100.0% 84.4%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 42.0 3.33e-01 100.0% 36.4%
4h4fA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 36.0 2.88e-01 84.1% 27.3%
2greA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.54 45.0 2.85e-01 95.5% 81.8%
3io5A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 2.76e-01 100.0% 71.2%
4jzsA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.53 43.0 3.01e-01 93.2% 60.8%
4ljzC06 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.52 41.0 3.59e-01 93.2% 86.7%
3isxA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 44.0 2.76e-01 97.7% 83.3%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.52 44.0 3.69e-01 100.0% 97.5%
2wyrA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.52 44.0 2.77e-01 95.5% 85.0%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 39.0 2.48e-01 100.0% 13.4%
7tuvA01 2.40.50.690 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 38.0 3.27e-01 100.0% 78.9%
1fnoA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.50 39.0 2.50e-01 97.7% 49.8%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3742938 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.74 54.0 4.75e-01 97.7% 53.8%
3995290 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.73 60.0 4.58e-01 95.5% 40.0%
3496292 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.72 61.0 5.73e-01 97.7% 76.4%
3916009 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.72 59.0 3.96e-01 100.0% 45.3%
3227176 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.71 60.0 4.39e-01 100.0% 39.1%
4479020 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.70 59.0 4.89e-01 100.0% 51.8%
4202460 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.68 60.0 4.73e-01 100.0% 50.0%
4315975 243.3.1.68 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY, FTP 0.68 56.0 3.90e-01 100.0% 26.7%
4951148 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 57.0 3.41e-01 100.0% 12.5%
3991847 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 55.0 3.67e-01 100.0% 22.5%
4444078 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.67 57.0 4.29e-01 100.0% 38.3%
3225123 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 53.0 5.34e-01 93.2% 95.6%
3439646 284.1.3.2 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.65 52.0 4.18e-01 100.0% 47.6%
4272501 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 55.0 4.26e-01 100.0% 41.9%
1410917 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.64 52.0 4.07e-01 90.9% 42.7%
4180235 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.64 53.0 4.51e-01 100.0% 56.2%
3512228 394.1.1.1 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.63 51.0 4.92e-01 93.2% 92.0%
3740846 1.1.7.46 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.62 52.0 3.98e-01 100.0% 81.7%
3985036 213.1.1.64 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF535 0.62 51.0 3.20e-01 100.0% 16.5%
4012314 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.62 49.0 3.11e-01 100.0% 79.3%
4150902 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.61 50.0 4.36e-01 100.0% 60.0%
3858468 4099.1.1.2 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 0.61 50.0 3.29e-01 100.0% 35.0%
3595489 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 51.0 4.67e-01 97.7% 73.3%
4424313 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.61 50.0 3.98e-01 100.0% 45.0%
4682108 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.61 51.0 4.24e-01 100.0% 52.9%
3180192 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.60 47.0 3.89e-01 93.2% 48.4%
4989676 2004.1.1.146 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.60 49.0 3.36e-01 100.0% 96.3%
3256145 9.15.1.1 beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.60 48.0 3.31e-01 95.5% 56.0%
3201714 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.60e-01 95.5% 78.2%
3684661 4099.1.1.1 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › MAD 0.60 45.0 3.40e-01 100.0% 30.0%
3226149 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 50.0 3.78e-01 100.0% 70.4%
3313861 4325.1.1.10 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF659 0.59 46.0 4.44e-01 97.7% 89.1%
3215092 2.1.1.235 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF26704 0.59 47.0 4.00e-01 95.5% 95.0%
3964748 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 46.0 3.73e-01 100.0% 91.4%
3940934 4023.1.1.0 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.58 45.0 3.74e-01 97.7% 49.5%
3722154 301.8.1.1 a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS 0.58 50.0 3.40e-01 100.0% 39.4%
3188984 247.1.1.27 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DUF4336 0.58 47.0 3.01e-01 100.0% 92.0%
3621734 2.6.1.0 beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease 0.57 48.0 3.56e-01 97.7% 73.3%
4008896 11.1.1.1286 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27224 0.57 47.0 3.55e-01 100.0% 36.0%
3505477 2492.1.1.2 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB 0.57 47.0 3.14e-01 97.7% 65.5%
4017683 247.1.1.10 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL,Lactamase_B_2 0.56 44.0 2.72e-01 97.7% 14.1%
2674741 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.56 43.0 4.05e-01 86.4% 78.2%
3940807 101.1.2.194 alpha arrays › HTH › HTH › winged helix domain › RIOX1_C_WH 0.56 44.0 3.17e-01 90.9% 30.0%
3371393 4266.2.1.1 alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like › DUF309 0.55 43.0 2.92e-01 88.6% 39.9%
3981104 1.1.7.22 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_M42 0.55 47.0 2.88e-01 97.7% 82.5%
3382011 252.2.1.1 a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.55 45.0 3.79e-01 95.5% 73.8%
5068231 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 45.0 3.91e-01 100.0% 65.3%
3632875 1075.4.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold 0.55 40.0 2.27e-01 86.4% 22.2%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 42.0 3.97e-01 97.7% 74.1%
5047489 844.1.1.0 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.53 40.0 2.82e-01 100.0% 22.0%
3927286 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.51 41.0 3.59e-01 100.0% 62.7%