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IMGVR_UViG_3300021483_000005-3300021483-Ga0190331_100001853
Arc-VirIMGVR_UViG_3300021483_000005-3300021483-Ga0190331_100001853
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-119
Domain cluster:
rep: IMGVR_UViG_3300021488_000049-3300021488-Ga0190305_100034912__D30-114
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ef2A02 | 3.30.460.70 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.79 | 68.0 | 5.97e-01 | 90.9% | 73.2% |
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.78 | 68.0 | 5.51e-01 | 93.9% | 67.4% |
| 2f4mA01 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.69 | 62.0 | 4.67e-01 | 98.0% | 68.3% |
| 1dbzA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.67 | 53.0 | 4.32e-01 | 84.8% | 61.4% |
| 3b21A00 | 3.90.70.140 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.63 | 54.0 | 4.34e-01 | 92.9% | 87.0% |
| 1qmyA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 53.0 | 4.56e-01 | 96.0% | 98.1% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 36.0 | 3.69e-01 | 88.9% | 67.0% |
| 4akrA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.55 | 44.0 | 4.38e-01 | 86.9% | 82.1% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.54 | 46.0 | 3.84e-01 | 99.0% | 85.6% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.52 | 39.0 | 3.82e-01 | 78.8% | 80.6% |
| 2vseA05 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 36.0 | 3.26e-01 | 73.7% | 72.5% |
| 2vseA03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 35.0 | 3.19e-01 | 71.7% | 72.3% |
| 4cvbA00 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.51 | 44.0 | 2.79e-01 | 97.0% | 40.7% |
| 5tf2A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 36.0 | 2.55e-01 | 73.7% | 68.3% |
| 2vseA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.51 | 36.0 | 3.23e-01 | 73.7% | 74.6% |
| 1kb0A01 | 2.140.10.10 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily | 0.51 | 41.0 | 2.61e-01 | 89.9% | 94.3% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959592 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.82 | 71.0 | 6.19e-01 | 89.9% | 78.6% |
| 5066083 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.79 | 69.0 | 5.22e-01 | 90.9% | 62.2% |
| 5031828 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.78 | 69.0 | 5.42e-01 | 92.9% | 68.9% |
| 1323187 | 219.1.1.38 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C93 | 0.77 | 67.0 | 5.41e-01 | 92.9% | 68.0% |
| 3974693 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 67.0 | 5.20e-01 | 93.9% | 60.0% |
| 4940215 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.75 | 66.0 | 5.21e-01 | 93.9% | 79.0% |
| 4989442 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.75 | 63.0 | 5.07e-01 | 88.9% | 67.4% |
| 4951834 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.75 | 62.0 | 4.79e-01 | 88.9% | 55.2% |
| 5003022 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.74 | 69.0 | 4.97e-01 | 100.0% | 49.8% |
| 4951033 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.74 | 69.0 | 5.03e-01 | 100.0% | 51.4% |
| 5006929 | 219.1.1.76 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF553 | 0.73 | 68.0 | 4.94e-01 | 100.0% | 51.8% |
| 5014896 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 63.0 | 5.21e-01 | 92.9% | 71.2% |
| 5008694 | 219.1.1.13 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core | 0.73 | 62.0 | 4.96e-01 | 91.9% | 79.5% |
| 4241417 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.61 | 49.0 | 3.71e-01 | 84.8% | 91.1% |
| 3164898 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.59 | 41.0 | 4.26e-01 | 88.9% | 75.8% |
| 4259069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 3.31e-01 | 80.8% | 36.5% |
| 3592335 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.59 | 41.0 | 2.86e-01 | 73.7% | 96.3% |
| 3168104 | 5.1.5.52 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › EMC1_C | 0.56 | 43.0 | 2.61e-01 | 82.8% | 14.3% |
| 4007999 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.56 | 40.0 | 3.62e-01 | 87.9% | 54.1% |
| 3993013 | 5.1.4.90 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 | 0.55 | 42.0 | 2.96e-01 | 81.8% | 31.8% |
| 4406602 | 4.11.1.1 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 | 0.54 | 37.0 | 3.42e-01 | 85.9% | 52.2% |
| 3829679 | 5.1.4.224 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 | 0.54 | 37.0 | 2.52e-01 | 71.7% | 33.8% |
| 3385468 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.54 | 38.0 | 3.04e-01 | 75.8% | 70.9% |
| 5033586 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 37.0 | 2.97e-01 | 73.7% | 43.7% |
| 4374249 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.53 | 37.0 | 3.35e-01 | 72.7% | 73.6% |
| 1113207 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.53 | 36.0 | 3.24e-01 | 71.7% | 69.7% |
| 5014374 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.52 | 38.0 | 2.47e-01 | 78.8% | 34.2% |
| 4203984 | 101.8.1.1 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f,Anticodon_2 | 0.52 | 38.0 | 2.47e-01 | 78.8% | 34.2% |
| 3198165 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 38.0 | 2.72e-01 | 78.8% | 48.2% |
| 3788785 | 5.1.5.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N | 0.52 | 36.0 | 2.37e-01 | 72.7% | 21.3% |
| 3859965 | 4.1.1.107 ↗ | beta barrels › SH3 › SH3 › SH3 › XRN1_D1 | 0.52 | 36.0 | 3.01e-01 | 73.7% | 92.6% |
| 5022885 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.51 | 41.0 | 2.67e-01 | 86.9% | 34.9% |
| 4026170 | 5.1.4.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Glu_cyclase_2 | 0.51 | 44.0 | 3.15e-01 | 96.0% | 85.5% |
| 3800237 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 45.0 | 4.24e-01 | 100.0% | 85.6% |
| 3485139 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 39.0 | 2.72e-01 | 82.8% | 89.2% |
| 3592374 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 39.0 | 2.85e-01 | 83.8% | 69.0% |
| 5043543 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 41.0 | 2.99e-01 | 87.9% | 60.0% |
| 3532938 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 40.0 | 2.72e-01 | 85.9% | 50.0% |
| 3895911 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 44.0 | 4.03e-01 | 99.0% | 88.1% |