Back to structures

IMGVR_UViG_3300021488_000016-3300021488-Ga0190305_100039413

Arc-Vir

IMGVR_UViG_3300021488_000016-3300021488-Ga0190305_100039413

Quality

95.0 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-75
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF12728.14 best HTH_17 35.7 1.20e-08 68.0% 90.2%
CATH (45)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.77 54.0 4.48e-01 72.0% 43.7%
4lhfA00 6.10.200.10 Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox 0.77 55.0 5.48e-01 74.7% 88.6%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.76 55.0 5.04e-01 84.0% 58.6%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.75 55.0 4.61e-01 76.0% 66.9%
5i41B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.73 51.0 5.37e-01 76.0% 80.6%
4r24B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.72 53.0 5.12e-01 77.3% 69.4%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 46.0 4.21e-01 70.7% 56.4%
1khvA04 6.10.140.320 Special › Helix non-globular › Helix Hairpins › 0.68 26.0 3.10e-01 78.7% 48.1%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 46.0 4.33e-01 72.0% 64.5%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 45.0 4.16e-01 72.0% 66.7%
7cluA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 44.0 4.18e-01 70.7% 66.3%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 45.0 4.21e-01 73.3% 66.7%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 4.52e-01 72.0% 78.9%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 3.63e-01 73.3% 47.1%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 44.0 3.95e-01 73.3% 56.7%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 43.0 4.03e-01 72.0% 66.7%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.96e-01 72.0% 64.9%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.25e-01 77.3% 72.4%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 4.06e-01 72.0% 69.4%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 3.50e-01 73.3% 65.9%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 42.0 3.82e-01 72.0% 64.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.45e-01 73.3% 44.7%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.38e-01 72.0% 42.9%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.39e-01 72.0% 43.3%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.63e-01 77.3% 66.7%
3nrvB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.39e-01 72.0% 42.6%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 41.0 3.40e-01 73.3% 42.9%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 3.85e-01 73.3% 72.8%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 3.87e-01 72.0% 72.6%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.08e-01 77.3% 73.8%
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 39.0 3.72e-01 72.0% 67.4%
2jscB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 3.75e-01 72.0% 72.5%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.58e-01 72.0% 70.0%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 37.0 3.57e-01 72.0% 67.8%
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.54 36.0 3.75e-01 82.7% 73.9%
2i71A02 1.10.3740.10 Mainly Alpha › Orthogonal Bundle › SSO1389-like fold › SSO1389-like domains 0.54 37.0 3.06e-01 72.0% 58.1%
3dgpB00 3.30.70.1220 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › TFB5-like 0.54 37.0 4.01e-01 88.0% 87.3%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 37.0 3.46e-01 72.0% 68.8%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.36e-01 72.0% 59.2%
3s93A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.53 37.0 3.61e-01 74.7% 67.5%
1fp2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 39.0 3.62e-01 80.0% 77.1%
1fs7A01 1.10.1130.10 Mainly Alpha › Orthogonal Bundle › Flavocytochrome C3; Chain A, domain 2 › Flavocytochrome C3; Chain A 0.52 36.0 2.49e-01 76.0% 94.6%
5i0hA02 1.20.5.4820 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 39.0 3.98e-01 85.3% 97.2%
4mo0A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.50 36.0 3.63e-01 77.3% 82.3%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 34.0 2.91e-01 72.0% 45.4%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4375315 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.92 60.0 7.23e-01 72.0% 100.0%
1710781 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.91 64.0 7.36e-01 73.3% 96.4%
3278372 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.91 61.0 6.56e-01 74.7% 80.0%
3840108 101.1.9.95 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.90 64.0 7.07e-01 81.3% 91.7%
3281256 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.90 65.0 6.36e-01 74.7% 71.2%
3954117 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.90 65.0 6.16e-01 74.7% 67.1%
5070666 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.89 62.0 7.09e-01 72.0% 100.0%
4547937 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.88 60.0 6.75e-01 70.7% 91.4%
3953197 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.88 62.0 5.70e-01 78.7% 57.9%
3955723 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.88 57.0 6.85e-01 72.0% 100.0%
3285399 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.85 55.0 6.54e-01 70.7% 98.0%
3385701 101.1.9.95 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 0.85 59.0 6.84e-01 78.7% 98.2%
4643722 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.85 55.0 6.62e-01 72.0% 100.0%
3289439 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.85 60.0 6.88e-01 77.3% 100.0%
5064906 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.84 59.0 6.78e-01 77.3% 100.0%
5028046 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.84 58.0 6.59e-01 72.0% 100.0%
5032504 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.83 59.0 6.67e-01 78.7% 100.0%
3962562 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.83 57.0 5.00e-01 70.7% 88.6%
4994568 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.82 58.0 6.61e-01 77.3% 100.0%
3589467 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.82 58.0 5.53e-01 73.3% 64.7%
4995042 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.82 60.0 5.78e-01 77.3% 98.8%
3958314 101.1.9.66 alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_wHTH 0.81 56.0 6.34e-01 85.3% 96.4%
5002797 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 55.0 6.08e-01 72.0% 88.3%
4933561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.80 56.0 6.37e-01 81.3% 98.2%
3976170 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.80 56.0 5.78e-01 72.0% 87.1%
3604634 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.79 57.0 6.33e-01 76.0% 98.3%
4334333 101.1.9.1 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind 0.79 56.0 4.54e-01 74.7% 63.6%
3974460 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.79 59.0 4.82e-01 78.7% 66.9%
3979592 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.79 55.0 4.62e-01 72.0% 51.7%
4992437 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.79 54.0 5.97e-01 73.3% 88.3%
4548007 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.79 63.0 6.05e-01 85.3% 75.3%
2168161 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.79 57.0 6.43e-01 81.3% 100.0%
4974775 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.79 54.0 5.92e-01 72.0% 90.0%
3281621 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 55.0 6.25e-01 77.3% 100.0%
3290892 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.78 57.0 5.02e-01 78.7% 54.3%
3589130 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.78 54.0 6.04e-01 72.0% 98.2%
3284686 101.1.9.84 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 0.78 58.0 4.02e-01 78.7% 25.7%
3976015 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.77 54.0 5.34e-01 77.3% 68.8%
3948669 101.1.9.26 alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like 0.77 53.0 4.57e-01 72.0% 53.0%
5073620 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 60.0 6.39e-01 84.0% 100.0%
3979434 101.1.9.101 alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1441 0.76 53.0 5.97e-01 77.3% 98.2%
4311945 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.76 68.0 5.64e-01 100.0% 87.7%
4518241 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.76 53.0 5.39e-01 77.3% 73.3%
3286117 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.75 56.0 4.66e-01 78.7% 47.2%
1827815 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.75 53.0 5.58e-01 74.7% 85.3%
3966930 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.74 55.0 4.84e-01 78.7% 80.0%
3949463 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.74 55.0 4.75e-01 78.7% 53.9%
3290032 101.1.9.126 alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_C, Rv2175c_wHTH 0.74 51.0 4.48e-01 74.7% 50.0%
3946974 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 52.0 4.66e-01 81.3% 56.2%
4954942 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.70 51.0 5.45e-01 77.3% 95.4%
3723668 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 43.0 3.47e-01 73.3% 35.2%
3278866 221.1.2.17 a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › DUF1062 0.63 43.0 4.78e-01 70.7% 93.3%
3654295 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 42.0 4.04e-01 77.3% 59.1%
1856688 101.1.2.35 alpha arrays › HTH › HTH › winged helix domain › TFIIF_beta 0.63 44.0 4.53e-01 73.3% 77.5%
3703451 101.1.15.0 alpha arrays › HTH › HTH › HAT1, C-terminal domain 0.61 45.0 4.26e-01 82.7% 65.6%
5051539 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.60 41.0 3.57e-01 70.7% 51.3%
4927248 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 40.0 4.08e-01 72.0% 70.3%
5071075 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.60 41.0 3.94e-01 70.7% 68.2%
4948782 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.59 40.0 4.09e-01 70.7% 73.3%
3189146 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 41.0 3.57e-01 73.3% 50.0%
4999062 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.56 40.0 3.77e-01 76.0% 65.3%
3180104 101.1.15.1 alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS 0.56 41.0 3.85e-01 77.3% 66.7%