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IMGVR_UViG_3300021488_000049-3300021488-Ga0190305_100034918

Arc-Vir

IMGVR_UViG_3300021488_000049-3300021488-Ga0190305_100034918

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-161
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7uzsX03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.68 36.0 4.12e-01 85.1% 67.8%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 31.0 4.02e-01 100.0% 76.7%
2ic2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 33.0 4.02e-01 88.3% 71.2%
3l5iA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 29.0 3.70e-01 88.3% 69.3%
1tdqA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 29.0 3.63e-01 88.3% 67.0%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 28.0 3.46e-01 88.3% 64.3%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.62 39.0 4.34e-01 82.5% 80.0%
3bpnC03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 33.0 3.95e-01 99.4% 77.2%
3qt2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 31.0 3.69e-01 100.0% 72.4%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 32.0 4.15e-01 100.0% 95.0%
3og6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 32.0 3.87e-01 100.0% 77.8%
2ee3A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 28.0 3.26e-01 87.7% 59.3%
3r8qA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 30.0 3.68e-01 100.0% 80.0%
3uesA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.58 42.0 4.68e-01 100.0% 95.1%
2ed8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 29.0 3.58e-01 98.7% 79.1%
1f6fB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 30.0 3.68e-01 100.0% 79.4%
5e55B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 31.0 3.72e-01 98.7% 81.7%
3wihA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 29.0 3.61e-01 100.0% 80.7%
1nlqE00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.56 32.0 3.85e-01 90.9% 85.7%
5utkA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 27.0 3.51e-01 96.8% 83.1%
1uasA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 32.0 3.90e-01 99.4% 94.3%
4n0rA03 2.60.40.3950 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 36.0 4.09e-01 100.0% 90.9%
2e8yA04 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 31.0 3.85e-01 99.4% 92.2%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.54 36.0 4.12e-01 78.6% 94.5%
1axiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 30.0 3.60e-01 100.0% 82.2%
4dohE02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 31.0 3.66e-01 100.0% 82.1%
4aw7A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 36.0 4.07e-01 100.0% 90.7%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 41.0 4.37e-01 100.0% 92.0%
2jqzA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.52 35.0 3.79e-01 91.6% 79.4%
3h20A01 3.30.1490.240 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain 0.52 25.0 3.48e-01 94.2% 100.0%
4a42A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 39.0 4.21e-01 100.0% 93.7%
3winE03 2.60.120.1090 Mainly Beta › Sandwich › Jelly Rolls › 0.52 33.0 3.77e-01 96.1% 88.2%
4ohvA01 2.60.120.1030 Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain 0.52 26.0 3.42e-01 70.8% 90.0%
3q8pB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 34.0 3.99e-01 83.1% 97.2%
2kmwA01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 32.0 3.73e-01 99.4% 90.4%
1x5lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 28.0 3.41e-01 98.1% 87.5%
4zelB01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.51 37.0 3.84e-01 90.9% 80.6%
3cc1A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 30.0 3.65e-01 98.1% 96.6%
3kq4B04 2.60.120.290 Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain 0.50 32.0 3.63e-01 90.9% 86.5%
1jx4A04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.50 30.0 3.59e-01 98.7% 90.8%
4yrdA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 32.0 3.56e-01 99.4% 80.7%
2w5fB01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 40.0 4.08e-01 93.5% 87.5%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4934819 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.66 44.0 4.78e-01 90.3% 82.4%
4970229 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.65 30.0 3.84e-01 100.0% 75.3%
4934789 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.63 29.0 3.78e-01 99.4% 76.5%
3891718 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.62 30.0 3.83e-01 100.0% 78.8%
5033505 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 34.0 3.96e-01 87.7% 73.6%
3272143 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.62 37.0 3.96e-01 100.0% 66.7%
3891681 11.1.1.129 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.62 34.0 3.71e-01 100.0% 63.1%
3257029 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.62 36.0 3.77e-01 100.0% 62.1%
3251202 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 38.0 4.10e-01 90.9% 71.5%
3272979 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.61 36.0 3.71e-01 100.0% 60.0%
3850412 11.1.1.129 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Interfer-bind 0.61 32.0 3.92e-01 100.0% 78.0%
3891518 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 30.0 3.64e-01 100.0% 71.6%
3256730 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.60 35.0 3.70e-01 100.0% 62.1%
5045573 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.60 34.0 3.98e-01 100.0% 78.7%
4977038 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 32.0 3.86e-01 98.1% 79.0%
4946956 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 28.0 3.43e-01 82.5% 68.4%
3601254 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 33.0 4.19e-01 98.7% 95.3%
3513488 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.59 35.0 3.91e-01 100.0% 74.8%
3262558 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.59 36.0 3.69e-01 100.0% 61.3%
3258564 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.59 35.0 3.63e-01 100.0% 60.7%
3235753 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.59 36.0 2.57e-01 100.0% 19.9%
5003035 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 34.0 3.33e-01 94.2% 48.8%
3503369 11.1.4.76 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO_5th 0.59 30.0 3.79e-01 100.0% 82.2%
5009312 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 35.0 4.10e-01 100.0% 83.6%
3235941 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 39.0 4.33e-01 99.4% 86.7%
5038686 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.58 36.0 4.03e-01 92.9% 80.9%
3392943 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.58 34.0 3.53e-01 100.0% 60.0%
3529581 103.1.1.67 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › UPF0515 0.58 19.0 3.47e-01 88.3% 100.0%
5042583 10.3.1.0 beta sandwiches › jelly-roll › TNF-like › TNF-like 0.57 31.0 3.74e-01 85.1% 81.1%
4858277 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.57 29.0 3.63e-01 98.1% 80.7%
4030329 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.57 36.0 3.89e-01 91.6% 72.6%
3275234 11.1.4.127 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF7035 0.57 33.0 3.83e-01 100.0% 78.2%
3529236 11.1.1.229 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IRK_C 0.57 38.0 3.66e-01 100.0% 60.0%
5029740 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 30.0 3.69e-01 87.0% 81.1%
3528266 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.56 28.0 3.52e-01 100.0% 77.8%
3587183 11.1.5.50 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › AgI_II_C2 0.55 43.0 4.21e-01 90.3% 76.4%
3276640 11.1.1.801 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7035 0.55 35.0 3.55e-01 100.0% 62.6%
3268665 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 32.0 3.55e-01 100.0% 70.8%
3593239 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 37.0 3.88e-01 100.0% 75.0%
4972786 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.55 42.0 4.20e-01 79.2% 96.8%
4462900 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.55 33.0 3.73e-01 90.9% 80.0%
3701320 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 33.0 3.95e-01 98.7% 91.0%
3291935 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.54 37.0 3.84e-01 91.6% 74.3%
3941331 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 31.0 3.51e-01 96.1% 73.3%
4941213 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 3.80e-01 100.0% 89.1%
3407319 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.52 32.0 3.44e-01 82.5% 70.8%
3171616 11.1.1.642 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig-like_Pom152_1 0.52 37.0 4.06e-01 100.0% 88.5%
3706187 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.51 31.0 3.84e-01 90.3% 100.0%
3413371 10.32.1.68 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Glce_b_sandwich 0.51 42.0 4.16e-01 88.3% 92.1%
5031647 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 26.0 3.40e-01 96.8% 97.1%
5067513 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 20.0 3.27e-01 89.0% 100.0%
3221886 11.2.1.52 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_nem 0.51 34.0 3.57e-01 92.2% 75.6%
3621494 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 33.0 3.68e-01 83.1% 82.4%
4942093 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.50 42.0 3.95e-01 91.6% 88.9%
1156534 10.5.1.4 beta sandwiches › jelly-roll › Viral protein domain › Viral protein domain › Hema_HEFG 0.50 37.0 3.78e-01 99.4% 79.3%