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IMGVR_UViG_3300021488_000068-3300021488-Ga0190305_10005358
Arc-VirIMGVR_UViG_3300021488_000068-3300021488-Ga0190305_10005358
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-118
Domain cluster:
rep: Salt_Pond_R1_B_D2_MG_scaffold_4_prodigal-single.1__X__X__00167__D111-185
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02026.22 best | RyR | 40.2 | 4.60e-10 | 79.8% | 49.5% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrtA00 | 6.20.350.10 | Special › Other non-globular › Actin; Chain A, domain 4 › | 0.84 | 58.0 | 5.76e-01 | 70.8% | 68.8% |
| 4ertA01 | 1.10.490.160 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.82 | 56.0 | 4.50e-01 | 70.8% | 50.9% |
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.56 | 37.0 | 4.43e-01 | 75.3% | 100.0% |
| 8gccA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.53 | 40.0 | 3.84e-01 | 100.0% | 69.2% |
| 1fs0G02 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.52 | 30.0 | 3.03e-01 | 89.9% | 55.1% |
| 3sqiA01 | 1.10.150.540 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 34.0 | 3.37e-01 | 88.8% | 59.6% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.52 | 35.0 | 3.19e-01 | 80.9% | 51.3% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 30.0 | 3.39e-01 | 86.5% | 81.0% |
| 6bmeA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 38.0 | 3.45e-01 | 100.0% | 57.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 400221 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.86 | 59.0 | 5.68e-01 | 70.8% | 65.7% |
| 3729821 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.85 | 80.0 | 6.49e-01 | 100.0% | 72.9% |
| 4960350 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.85 | 80.0 | 6.47e-01 | 100.0% | 75.5% |
| 2526776 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.83 | 58.0 | 5.80e-01 | 71.9% | 72.5% |
| 3960387 | 3191.1.1.0 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs | 0.82 | 76.0 | 5.94e-01 | 100.0% | 76.1% |
| 4974222 | 3191.1.1.0 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs | 0.82 | 76.0 | 6.12e-01 | 100.0% | 71.2% |
| 146969 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.79 | 54.0 | 4.18e-01 | 70.8% | 57.1% |
| 4797697 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.69 | 61.0 | 4.61e-01 | 97.8% | 73.2% |
| 3583703 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.53 | 45.0 | 3.23e-01 | 96.6% | 100.0% |
| 4882405 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.50 | 35.0 | 3.41e-01 | 76.4% | 63.7% |