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IMGVR_UViG_3300021490_000036-3300021490-Ga0190330_100054220
Arc-VirIMGVR_UViG_3300021490_000036-3300021490-Ga0190330_100054220
Identity
- Kingdom:
- archaea
Quality
70.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-58
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1exkA00 | 2.10.230.10 | Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain | 0.74 | 53.0 | 4.66e-01 | 82.7% | 50.6% |
| 2cttA01 | 2.10.230.10 | Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain | 0.73 | 50.0 | 4.63e-01 | 73.1% | 55.1% |
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 37.0 | 3.22e-01 | 100.0% | 42.9% |
| 4hw0C00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 38.0 | 3.05e-01 | 100.0% | 36.6% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 37.0 | 3.11e-01 | 100.0% | 40.5% |
| 4dziB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.56 | 44.0 | 2.67e-01 | 88.5% | 64.1% |
| 4dg8A01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.56 | 45.0 | 2.68e-01 | 90.4% | 72.5% |
| 1uhvA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 45.0 | 2.78e-01 | 92.3% | 73.5% |
| 4uwmA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.53 | 45.0 | 2.78e-01 | 100.0% | 91.4% |
| 2i5eA02 | 6.10.140.50 | Special › Helix non-globular › Helix Hairpins › | 0.52 | 30.0 | 3.25e-01 | 94.2% | 62.8% |
| 1r1tA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.11e-01 | 94.2% | 41.8% |
| 3ei3A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 42.0 | 2.63e-01 | 94.2% | 59.8% |
| 1g01A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 42.0 | 2.60e-01 | 94.2% | 58.8% |
| 5yl6A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.52 | 37.0 | 2.57e-01 | 75.0% | 75.0% |
| 1s7iA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.52 | 44.0 | 3.42e-01 | 100.0% | 53.2% |
| 3g1nA02 | 3.30.2160.10 | Alpha Beta › 2-Layer Sandwich › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain | 0.51 | 36.0 | 3.17e-01 | 86.5% | 48.8% |
| 2ayaA00 | 3.30.300.150 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DNA polymerase III, tau subunit, domain V | 0.51 | 44.0 | 3.35e-01 | 100.0% | 75.8% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.50 | 32.0 | 2.21e-01 | 71.2% | 15.9% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4531747 | 375.1.1.301 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DnaJ_CXXCXGXG | 0.94 | 66.0 | 7.45e-01 | 73.1% | 95.0% |
| 4250770 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.90 | 64.0 | 5.71e-01 | 75.0% | 57.1% |
| 3405173 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.89 | 65.0 | 5.81e-01 | 80.8% | 57.1% |
| 3572265 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.89 | 63.0 | 5.66e-01 | 75.0% | 55.7% |
| 5057890 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.88 | 66.0 | 4.61e-01 | 78.8% | 30.3% |
| 4060106 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.88 | 63.0 | 7.06e-01 | 75.0% | 97.5% |
| 4351918 | 67.1.1.4 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C | 0.86 | 64.0 | 4.34e-01 | 78.8% | 25.9% |
| 4231511 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.85 | 62.0 | 4.23e-01 | 80.8% | 24.2% |
| 4208701 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.84 | 63.0 | 5.35e-01 | 78.8% | 52.5% |
| 3611413 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.84 | 60.0 | 5.36e-01 | 75.0% | 57.1% |
| 3598905 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.83 | 59.0 | 5.32e-01 | 75.0% | 57.1% |
| 3630008 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.83 | 62.0 | 5.78e-01 | 84.6% | 65.1% |
| 4024146 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.79 | 59.0 | 6.06e-01 | 80.8% | 86.0% |
| 4885912 | 67.1.1.6 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG | 0.79 | 59.0 | 5.58e-01 | 78.8% | 70.0% |
| 3811530 | 361.1.1.5 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › GRXCR1_C | 0.75 | 58.0 | 5.97e-01 | 82.7% | 89.8% |
| 159051 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.73 | 50.0 | 4.06e-01 | 73.1% | 36.5% |
| 3686341 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.63 | 45.0 | 2.49e-01 | 75.0% | 83.2% |
| 3385992 | 3962.1.1.7 ↗ | alpha arrays › N-terminal helical domain in restriction-modification system methylation subunit-like › N-terminal helical domain in restriction-modification system methylation subunit › N-terminal helical domain in restriction-modification system methylation subunit › DUF7814 | 0.62 | 37.0 | 2.50e-01 | 100.0% | 15.1% |
| 4023995 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.62 | 49.0 | 2.78e-01 | 92.3% | 43.4% |
| 3579330 | 7516.1.1.7 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › UDPGP | 0.61 | 42.0 | 2.71e-01 | 73.1% | 55.6% |
| 4981704 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 37.0 | 3.94e-01 | 100.0% | 73.3% |
| 3916582 | 2006.1.1.8 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › 5_nucleotid | 0.57 | 39.0 | 2.52e-01 | 75.0% | 80.3% |
| None | — | 0.55 | 43.0 | 2.36e-01 | 84.6% | 12.2% | |
| 4023970 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.54 | 42.0 | 2.43e-01 | 94.2% | 21.7% |
| 3846669 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.54 | 42.0 | 2.35e-01 | 84.6% | 13.3% |
| 3607805 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.53 | 45.0 | 2.92e-01 | 98.1% | 74.1% |
| 3916265 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.53 | 46.0 | 2.70e-01 | 96.2% | 14.4% |
| 4057956 | 2004.1.1.35 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA | 0.53 | 43.0 | 2.93e-01 | 100.0% | 41.3% |
| 3554902 | 7516.1.1.7 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › UDPGP | 0.51 | 40.0 | 2.45e-01 | 90.4% | 72.5% |
| 4587271 | 9002.1.1.1 ↗ | a/b three-layered sandwiches › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 | 0.51 | 36.0 | 3.69e-01 | 96.2% | 76.0% |
| 3674052 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.51 | 42.0 | 2.51e-01 | 98.1% | 11.3% |
| 3470155 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.51 | 39.0 | 2.63e-01 | 90.4% | 37.3% |
| 3782440 | 109.4.1.526 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Atx10homo_assoc | 0.51 | 34.0 | 2.24e-01 | 71.2% | 75.7% |
| 3609869 | 1189.1.1.1 ↗ | alpha bundles › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › VSG (variant surface glycoprotein) N-terminal domain and haptoglobin-hemoglobin receptor › Trypan_glycop | 0.51 | 38.0 | 2.40e-01 | 86.5% | 13.6% |
| 1199657 | 9002.1.1.1 ↗ | a/b three-layered sandwiches › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 | 0.51 | 36.0 | 3.55e-01 | 96.2% | 69.6% |
| 3630323 | 261.1.1.1 ↗ | a+b complex topology › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › Hect, E3 ligase catalytic domain › HECT | 0.50 | 41.0 | 2.26e-01 | 92.3% | 13.1% |
| 3550136 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.50 | 37.0 | 2.83e-01 | 98.1% | 35.7% |
D2
high
residues 61-134