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IMGVR_UViG_3300021491_000005-3300021491-Ga0190332_100001548
Arc-VirIMGVR_UViG_3300021491_000005-3300021491-Ga0190332_100001548
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-107
Domain cluster:
rep: JN880423.1__AFJ21461.1__X__00006__D19-112
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.82 | 75.0 | 5.97e-01 | 100.0% | 64.8% |
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.80 | 74.0 | 5.84e-01 | 100.0% | 60.1% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.75 | 36.0 | 3.83e-01 | 85.7% | 50.7% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.74 | 67.0 | 5.65e-01 | 100.0% | 67.6% |
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 35.0 | 3.21e-01 | 92.9% | 37.3% |
| 6vilA01 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.63 | 36.0 | 2.92e-01 | 86.9% | 33.1% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 35.0 | 3.67e-01 | 100.0% | 61.8% |
| 1dfaA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.60 | 51.0 | 3.91e-01 | 95.2% | 93.1% |
| 3ne5C02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.59 | 41.0 | 3.85e-01 | 100.0% | 58.8% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.58 | 31.0 | 3.74e-01 | 97.6% | 78.6% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 49.0 | 4.37e-01 | 100.0% | 66.1% |
| 3mq2A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 48.0 | 3.55e-01 | 100.0% | 38.1% |
| 4ux7A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.54 | 48.0 | 3.66e-01 | 100.0% | 56.9% |
| 8igrI01 | 2.40.270.10 | Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 | 0.52 | 48.0 | 3.72e-01 | 100.0% | 97.2% |
| 2wb8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 46.0 | 3.77e-01 | 100.0% | 62.1% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 45.0 | 3.87e-01 | 100.0% | 63.4% |
| 4pwyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 40.0 | 2.94e-01 | 85.7% | 49.6% |
| 1l0wA03 | 3.30.1360.30 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › GAD-like domain | 0.51 | 42.0 | 3.66e-01 | 100.0% | 57.2% |
| 6hgcA01 | 3.40.532.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ubiquitin C-terminal Hydrolase UCH-l3 › Peptidase C12, ubiquitin carboxyl-terminal hydrolase | 0.51 | 39.0 | 3.09e-01 | 84.5% | 99.0% |
| 4j27A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.50 | 27.0 | 2.75e-01 | 100.0% | 44.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944719 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.86 | 81.0 | 6.65e-01 | 100.0% | 66.9% |
| 4019865 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.86 | 80.0 | 6.54e-01 | 100.0% | 65.5% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.85 | 79.0 | 6.96e-01 | 100.0% | 71.3% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.85 | 80.0 | 6.87e-01 | 100.0% | 68.8% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.85 | 81.0 | 7.24e-01 | 100.0% | 77.3% |
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.85 | 80.0 | 6.97e-01 | 100.0% | 73.3% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.85 | 79.0 | 7.04e-01 | 100.0% | 73.9% |
| 5078127 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.84 | 77.0 | 7.69e-01 | 100.0% | 96.5% |
| 4958692 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.84 | 78.0 | 6.31e-01 | 100.0% | 68.7% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.84 | 77.0 | 7.12e-01 | 100.0% | 79.0% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.84 | 78.0 | 7.04e-01 | 100.0% | 80.9% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 78.0 | 7.04e-01 | 100.0% | 78.2% |
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.83 | 78.0 | 6.78e-01 | 100.0% | 70.0% |
| 3817355 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.82 | 76.0 | 6.47e-01 | 100.0% | 68.5% |
| 3356712 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 41.0 | 5.61e-01 | 86.9% | 93.3% |
| 144031 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.82 | 75.0 | 5.97e-01 | 100.0% | 64.8% |
| 4995779 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.82 | 75.0 | 6.14e-01 | 100.0% | 85.8% |
| 3653680 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.82 | 76.0 | 5.69e-01 | 100.0% | 46.8% |
| 3603398 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 75.0 | 6.81e-01 | 100.0% | 86.2% |
| 3304930 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.81 | 75.0 | 6.81e-01 | 100.0% | 79.1% |
| 4998591 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.81 | 75.0 | 6.14e-01 | 100.0% | 71.0% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.80 | 70.0 | 6.32e-01 | 100.0% | 70.9% |
| 3279326 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 66.0 | 6.52e-01 | 100.0% | 84.4% |
| 177 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.79 | 72.0 | 5.84e-01 | 100.0% | 62.7% |
| 5032025 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 59.0 | 5.49e-01 | 100.0% | 64.8% |
| 4953076 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 70.0 | 6.17e-01 | 100.0% | 76.7% |
| 4104219 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.76 | 39.0 | 4.43e-01 | 89.3% | 64.6% |
| 3165125 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.76 | 68.0 | 6.30e-01 | 100.0% | 78.1% |
| 4155252 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.75 | 67.0 | 6.24e-01 | 100.0% | 78.1% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.74 | 66.0 | 5.39e-01 | 100.0% | 54.4% |
| 3598222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 40.0 | 4.41e-01 | 89.3% | 65.7% |
| 2674741 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.71 | 36.0 | 4.35e-01 | 89.3% | 74.5% |
| 3708407 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.71 | 40.0 | 4.05e-01 | 94.0% | 55.3% |
| 4889079 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.69 | 39.0 | 3.63e-01 | 100.0% | 44.3% |
| 4947785 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.64 | 39.0 | 4.26e-01 | 100.0% | 73.9% |
| 3951961 | 4.1.1.32 ↗ | beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID | 0.64 | 33.0 | 3.15e-01 | 89.3% | 43.2% |
| 2546507 | 69.1.1.2 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hom_end_hint | 0.61 | 53.0 | 4.44e-01 | 95.2% | 90.2% |
| 4977711 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.59 | 51.0 | 4.34e-01 | 100.0% | 62.1% |
| 3289825 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.58 | 49.0 | 4.56e-01 | 100.0% | 74.3% |
| 3968079 | 206.1.3.26 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_5 | 0.58 | 48.0 | 3.49e-01 | 90.5% | 41.3% |
| 3593957 | 304.34.1.0 ↗ | a+b two layers › Alpha-beta plaits › Nucleoside diphosphate kinases › Nucleoside diphosphate kinases | 0.51 | 45.0 | 3.74e-01 | 100.0% | 56.2% |
| 3966384 | 329.1.1.0 ↗ | a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain | 0.50 | 41.0 | 3.63e-01 | 94.0% | 65.2% |
| 5036416 | 327.11.2.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 | 0.50 | 31.0 | 3.10e-01 | 100.0% | 60.0% |