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IMGVR_UViG_3300021491_000039-3300021491-Ga0190332_100024827
Arc-VirIMGVR_UViG_3300021491_000039-3300021491-Ga0190332_100024827
Identity
- Kingdom:
- archaea
Quality
86.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 105-197
Domain cluster:
rep: IMGVR_UViG_3300010332_000127-3300010332-Ga0116200_100039035__D12-102
D2
medium
residues 33-104
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 57.0 | 4.92e-01 | 76.4% | 54.7% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 55.0 | 4.68e-01 | 75.0% | 51.4% |
| 2iw2A01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.67 | 31.0 | 2.29e-01 | 70.8% | 17.2% |
| 1wp1B01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.63 | 56.0 | 3.48e-01 | 95.8% | 22.3% |
| 7r0kA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.59 | 41.0 | 3.16e-01 | 72.2% | 73.5% |
| 2z73B01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.59 | 54.0 | 3.44e-01 | 100.0% | 64.5% |
| 3u1nB01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.51 | 37.0 | 2.45e-01 | 79.2% | 79.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3380612 | 263.1.1.1 ↗ | a+b three layers › SRF-like › SRF-like › SRF-like › SRF-TF | 0.74 | 53.0 | 4.21e-01 | 75.0% | 70.0% |
| 3630540 | 3877.1.1.0 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC | 0.71 | 57.0 | 3.81e-01 | 86.1% | 30.6% |
| 4024477 | 601.19.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein | 0.68 | 56.0 | 3.98e-01 | 86.1% | 37.4% |
| 4467663 | 601.51.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N,Flagellin_C | 0.67 | 60.0 | 3.93e-01 | 95.8% | 49.6% |
| 3319155 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.66 | 59.0 | 3.89e-01 | 97.2% | 59.6% |
| 5018603 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.64 | 41.0 | 2.78e-01 | 70.8% | 20.6% |
| 3199254 | 604.6.1.41 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF846 | 0.64 | 49.0 | 3.90e-01 | 80.6% | 95.6% |
| 4619139 | 633.23.1.21 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › TM140 | 0.63 | 49.0 | 3.74e-01 | 86.1% | 81.1% |
| 4472719 | 171.1.1.9 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3, Ribonucleas_3_3 | 0.62 | 39.0 | 2.72e-01 | 70.8% | 21.9% |
| 3710084 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.54 | 44.0 | 3.25e-01 | 84.7% | 54.1% |
| 3867927 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.51 | 37.0 | 3.17e-01 | 80.6% | 67.7% |