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IMGVR_UViG_3300021492_000027-3300021492-Ga0190336_1000002126
Arc-VirIMGVR_UViG_3300021492_000027-3300021492-Ga0190336_1000002126
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 190-231
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mekA02 | 6.10.140.2220 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 61.0 | 5.84e-01 | 83.3% | 71.4% |
| 1wigA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.71 | 58.0 | 5.04e-01 | 100.0% | 82.2% |
| 2dj7A00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.69 | 56.0 | 4.63e-01 | 95.2% | 71.2% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.68 | 53.0 | 4.43e-01 | 90.5% | 71.6% |
| 1y8fA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.67 | 53.0 | 5.11e-01 | 92.9% | 80.4% |
| 2xb1A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.67 | 53.0 | 4.14e-01 | 90.5% | 61.5% |
| 5y20A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 52.0 | 4.89e-01 | 88.1% | 100.0% |
| 2jrjA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 50.0 | 4.84e-01 | 92.9% | 76.9% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.66 | 56.0 | 4.92e-01 | 100.0% | 92.4% |
| 7r71A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 51.0 | 4.61e-01 | 100.0% | 62.5% |
| 3t7lA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.64 | 52.0 | 4.47e-01 | 95.2% | 75.7% |
| 5d1kB01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.62 | 47.0 | 4.02e-01 | 90.5% | 67.5% |
| 2ds5A00 | 6.20.220.10 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain | 0.62 | 45.0 | 4.57e-01 | 81.0% | 81.4% |
| 3s6pG00 | 6.10.140.1660 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 39.0 | 3.35e-01 | 88.1% | 88.9% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3301457 | 931.1.1.7 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › VATC | 0.91 | 70.0 | 7.56e-01 | 85.7% | 100.0% |
| 3394481 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.90 | 76.0 | 7.81e-01 | 97.6% | 97.5% |
| 3544665 | 931.1.1.0 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein | 0.90 | 69.0 | 4.36e-01 | 85.7% | 18.4% |
| 3581664 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.87 | 57.0 | 6.49e-01 | 71.4% | 96.7% |
| 4937876 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.87 | 65.0 | 4.55e-01 | 85.7% | 27.2% |
| 3541608 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.86 | 76.0 | 7.42e-01 | 95.2% | 91.1% |
| 3829309 | 377.1.1.33 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FLZ | 0.86 | 69.0 | 6.96e-01 | 88.1% | 88.1% |
| 3816328 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.86 | 72.0 | 4.21e-01 | 90.5% | 24.6% |
| 8198 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.85 | 74.0 | 6.99e-01 | 95.2% | 83.7% |
| 3941330 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.85 | 58.0 | 6.51e-01 | 73.8% | 100.0% |
| 3907976 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.85 | 71.0 | 6.95e-01 | 90.5% | 88.9% |
| 4926891 | 377.1.1.126 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH | 0.85 | 72.0 | 7.03e-01 | 92.9% | 91.1% |
| 5030292 | 931.1.1.0 ↗ | few secondary structure elements › Metallothionein › Metallothionein › Metallothionein | 0.84 | 63.0 | 6.72e-01 | 88.1% | 100.0% |
| 5011221 | 377.1.1.126 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH | 0.84 | 69.0 | 7.04e-01 | 90.5% | 100.0% |
| 3919489 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.84 | 69.0 | 7.10e-01 | 90.5% | 100.0% |
| 3578137 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.84 | 57.0 | 6.30e-01 | 73.8% | 100.0% |
| 3890996 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.83 | 57.0 | 6.33e-01 | 73.8% | 100.0% |
| 3845449 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.83 | 74.0 | 7.23e-01 | 97.6% | 93.3% |
| 3921863 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.83 | 58.0 | 4.83e-01 | 76.2% | 44.3% |
| 5007944 | 377.1.1.126 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Arc_trans_TRASH | 0.81 | 65.0 | 6.71e-01 | 88.1% | 97.5% |
| 3584576 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.81 | 71.0 | 6.74e-01 | 97.6% | 83.7% |
| 3907978 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.81 | 69.0 | 7.02e-01 | 97.6% | 100.0% |
| 3812458 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.80 | 59.0 | 3.84e-01 | 78.6% | 21.8% |
| 3254666 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.80 | 54.0 | 6.03e-01 | 73.8% | 100.0% |
| 3761140 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 57.0 | 5.03e-01 | 76.2% | 73.3% |
| 3230540 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 54.0 | 5.91e-01 | 73.8% | 100.0% |
| 3415118 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.78 | 69.0 | 6.52e-01 | 97.6% | 86.0% |
| 3398147 | 70.3.1.1 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like › SET | 0.76 | 66.0 | 3.88e-01 | 97.6% | 13.1% |
| 3908093 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.76 | 63.0 | 6.20e-01 | 92.9% | 91.1% |
| 3765619 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.76 | 57.0 | 5.84e-01 | 83.3% | 87.5% |
| 3573945 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.76 | 65.0 | 5.38e-01 | 97.6% | 77.3% |
| 3995253 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.75 | 52.0 | 5.35e-01 | 76.2% | 77.5% |
| 4940041 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 57.0 | 6.10e-01 | 83.3% | 100.0% |
| 4180431 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.74 | 50.0 | 5.31e-01 | 71.4% | 100.0% |
| 3440301 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.72 | 58.0 | 4.98e-01 | 92.9% | 62.9% |
| 3506560 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.72 | 52.0 | 5.60e-01 | 78.6% | 97.1% |
| 3888562 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.72 | 47.0 | 5.12e-01 | 71.4% | 96.7% |
| 3269829 | 377.9.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND | 0.71 | 59.0 | 5.79e-01 | 97.6% | 86.7% |
| 3201162 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.70 | 57.0 | 4.70e-01 | 90.5% | 53.3% |
| 3742454 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.70 | 53.0 | 5.57e-01 | 85.7% | 100.0% |
| 3697191 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.70 | 53.0 | 5.65e-01 | 88.1% | 100.0% |
| 3712859 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.69 | 53.0 | 5.43e-01 | 88.1% | 100.0% |
| 5075724 | 376.1.1.181 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Zn_Ribbon_1 | 0.68 | 58.0 | 5.19e-01 | 97.6% | 75.0% |
| 3559364 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.68 | 50.0 | 5.26e-01 | 81.0% | 100.0% |
| 4970980 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 57.0 | 5.13e-01 | 100.0% | 81.0% |
| 3268019 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.68 | 53.0 | 4.74e-01 | 92.9% | 76.9% |
| 3501826 | 377.1.1.5 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM | 0.67 | 51.0 | 4.63e-01 | 85.7% | 91.7% |
| 4990542 | 377.1.1.128 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › DUF2175 | 0.67 | 50.0 | 4.92e-01 | 83.3% | 82.2% |
| 3173007 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.66 | 54.0 | 4.60e-01 | 92.9% | 74.3% |
| 5076504 | 376.1.1.183 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Prok-RING_1 | 0.66 | 54.0 | 5.21e-01 | 97.6% | 92.0% |
| 3264608 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.65 | 51.0 | 4.51e-01 | 97.6% | 62.9% |
| 3224677 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.64 | 50.0 | 4.56e-01 | 90.5% | 75.0% |
| 3400916 | 377.1.1.20 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 | 0.64 | 50.0 | 4.98e-01 | 90.5% | 86.7% |
| 3903161 | 377.1.1.20 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 | 0.63 | 49.0 | 5.03e-01 | 90.5% | 92.5% |
| 3975403 | 377.1.1.17 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C4_ClpX | 0.62 | 46.0 | 4.58e-01 | 81.0% | 77.8% |
| 3210733 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.62 | 48.0 | 4.42e-01 | 92.9% | 78.3% |
| 3645378 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.61 | 47.0 | 4.41e-01 | 97.6% | 70.0% |
| 3399231 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 44.0 | 3.88e-01 | 95.2% | 58.7% |
| 3737810 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 46.0 | 4.11e-01 | 97.6% | 79.7% |
| 4670436 | 375.1.1.284 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF27208 | 0.55 | 40.0 | 4.06e-01 | 85.7% | 95.0% |
D2
high
residues 418-533
Domain cluster:
representative
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p4gA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.69 | 63.0 | 4.90e-01 | 100.0% | 98.0% |
| 4d4iA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.69 | 51.0 | 3.49e-01 | 96.6% | 22.2% |
| 2hxwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.68 | 50.0 | 5.00e-01 | 87.1% | 74.6% |
| 2aznA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.65 | 54.0 | 4.36e-01 | 88.8% | 98.6% |
| 2b3zA02 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.64 | 55.0 | 4.43e-01 | 93.1% | 99.6% |
| 3euaA03 | 3.40.50.12570 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 47.0 | 5.08e-01 | 81.9% | 94.7% |
| 3kosA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.64 | 43.0 | 4.51e-01 | 87.9% | 76.7% |
| 6yhrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 55.0 | 4.69e-01 | 98.3% | 75.8% |
| 3ky8A01 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.62 | 50.0 | 4.38e-01 | 86.2% | 100.0% |
| 2ctzA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.62 | 56.0 | 4.22e-01 | 100.0% | 52.3% |
| 3hhfA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 41.0 | 4.39e-01 | 93.1% | 79.2% |
| 2amlA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.61 | 52.0 | 4.87e-01 | 95.7% | 86.4% |
| 3mz1B01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.61 | 41.0 | 4.28e-01 | 90.5% | 75.5% |
| 2qmwA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 46.0 | 5.06e-01 | 85.3% | 100.0% |
| 4oxxA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.60 | 48.0 | 4.41e-01 | 86.2% | 94.1% |
| 3i9fB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 53.0 | 4.75e-01 | 100.0% | 91.1% |
| 4rxlA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 43.0 | 4.34e-01 | 87.1% | 74.4% |
| 3mwbA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.60 | 46.0 | 4.96e-01 | 86.2% | 97.9% |
| 1o1yA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.60 | 49.0 | 3.96e-01 | 89.7% | 100.0% |
| 3ri6A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 53.0 | 4.28e-01 | 100.0% | 63.2% |
| 7f1uA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 52.0 | 4.15e-01 | 99.1% | 56.9% |
| 1cl1A01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.59 | 52.0 | 4.11e-01 | 99.1% | 56.3% |
| 4n03A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 53.0 | 4.58e-01 | 97.4% | 80.1% |
| 2ip2A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 51.0 | 4.10e-01 | 100.0% | 72.0% |
| 4oteB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 47.0 | 4.44e-01 | 90.5% | 72.8% |
| 1wdeA01 | 3.40.1010.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cobalt-precorrin-4 Transmethylase; domain 1 › Tetrapyrrole methylase, N-terminal domain | 0.58 | 48.0 | 4.84e-01 | 90.5% | 92.2% |
| 4lubB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.58 | 45.0 | 4.76e-01 | 90.5% | 95.0% |
| 4c7oA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 50.0 | 4.28e-01 | 97.4% | 68.6% |
| 3imkA00 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 43.0 | 3.92e-01 | 100.0% | 58.2% |
| 3c3jA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 50.0 | 4.25e-01 | 96.6% | 78.9% |
| 4c6sA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.57 | 47.0 | 4.39e-01 | 87.9% | 97.9% |
| 2jfqA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 47.0 | 4.80e-01 | 88.8% | 99.1% |
| 1pzmA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 50.0 | 4.42e-01 | 97.4% | 70.6% |
| 3hbaA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 49.0 | 4.21e-01 | 95.7% | 71.2% |
| 3kcnB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 47.0 | 4.49e-01 | 89.7% | 89.1% |
| 2wjwA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 50.0 | 4.51e-01 | 98.3% | 86.5% |
| 1ve3A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 50.0 | 4.14e-01 | 100.0% | 87.3% |
| 3vs8H00 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.56 | 43.0 | 3.11e-01 | 84.5% | 64.3% |
| 4qgsA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 47.0 | 4.23e-01 | 94.0% | 91.7% |
| 4c5cA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 39.0 | 4.41e-01 | 86.2% | 100.0% |
| 5buqA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.56 | 49.0 | 3.48e-01 | 99.1% | 35.0% |
| 1npyA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.56 | 41.0 | 4.37e-01 | 88.8% | 90.0% |
| 3dh0B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 48.0 | 4.16e-01 | 98.3% | 92.1% |
| 3g7uA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 48.0 | 4.20e-01 | 99.1% | 91.8% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 47.0 | 3.92e-01 | 94.8% | 71.1% |
| 2jfzA02 | 3.40.50.1860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 49.0 | 4.88e-01 | 96.6% | 99.2% |
| 4a9cA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.55 | 48.0 | 3.68e-01 | 100.0% | 91.3% |
| 2cb0A01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.54 | 46.0 | 4.19e-01 | 94.8% | 79.7% |
| 6za2B01 | 3.40.50.10390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 | 0.54 | 42.0 | 3.88e-01 | 85.3% | 97.4% |
| 3szpB02 | 3.40.190.290 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.53 | 43.0 | 3.63e-01 | 88.8% | 89.4% |
| 1q35A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 43.0 | 4.01e-01 | 88.8% | 74.7% |
| 4wesB02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.53 | 39.0 | 4.12e-01 | 79.3% | 95.2% |
| 1w2wB00 | 3.40.50.10470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor eif-2b; domain 2 | 0.52 | 42.0 | 3.62e-01 | 87.9% | 89.0% |
| 4hlyA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 37.0 | 3.89e-01 | 97.4% | 81.1% |
| 4k28A01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.52 | 42.0 | 4.21e-01 | 87.1% | 94.1% |
| 1ka1A02 | 3.40.190.80 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › | 0.51 | 42.0 | 4.07e-01 | 91.4% | 83.7% |
| 4z7eA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 41.0 | 3.69e-01 | 87.1% | 68.7% |
| 3fbtA01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.50 | 40.0 | 3.85e-01 | 87.9% | 83.6% |
| 1iejA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 40.0 | 3.80e-01 | 87.9% | 99.3% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5007755 | 3110.1.1.0 ↗ | a/b three-layered sandwiches › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain › STT3/PglB/AglB core domain | 0.91 | 87.0 | 8.50e-01 | 100.0% | 93.5% |
| 3839268 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.69 | 50.0 | 5.02e-01 | 87.9% | 73.3% |
| 4033392 | 7501.1.1.2 ↗ | a/b three-layered sandwiches › Dihydrofolate reductases › Dihydrofolate reductases › Dihydrofolate reductases › RibD_C | 0.64 | 53.0 | 4.37e-01 | 88.8% | 99.0% |
| 3973666 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.64 | 42.0 | 4.29e-01 | 89.7% | 67.8% |
| 3945743 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.64 | 56.0 | 3.68e-01 | 96.6% | 54.8% |
| 4007755 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 56.0 | 3.54e-01 | 98.3% | 45.1% |
| 3947777 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.63 | 44.0 | 4.60e-01 | 93.1% | 79.0% |
| 3973123 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.62 | 44.0 | 4.54e-01 | 90.5% | 76.4% |
| 4991146 | 7577.1.1.7 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases › Cys_Met_Meta_PP | 0.62 | 54.0 | 4.23e-01 | 97.4% | 53.3% |
| 3599458 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.62 | 52.0 | 4.58e-01 | 91.4% | 90.6% |
| 4962909 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.61 | 54.0 | 4.39e-01 | 100.0% | 83.9% |
| 3958644 | 256.1.1.2 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › DUF5703 | 0.61 | 32.0 | 4.21e-01 | 100.0% | 92.3% |
| 3915450 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.61 | 44.0 | 4.66e-01 | 82.8% | 84.8% |
| 3948590 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.60 | 41.0 | 4.38e-01 | 93.1% | 81.0% |
| 5077466 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.60 | 53.0 | 4.55e-01 | 100.0% | 87.4% |
| 5037611 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.60 | 46.0 | 4.76e-01 | 91.4% | 86.4% |
| 9975 | 2007.1.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase | 0.60 | 49.0 | 3.96e-01 | 89.7% | 100.0% |
| 3435345 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.59 | 46.0 | 4.43e-01 | 89.7% | 71.1% |
| 3980669 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.59 | 51.0 | 3.42e-01 | 96.6% | 27.5% |
| 4418639 | 2003.1.1.120 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA | 0.59 | 48.0 | 4.19e-01 | 90.5% | 77.8% |
| 4890134 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.58 | 49.0 | 4.20e-01 | 94.0% | 80.3% |
| 4947576 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.58 | 43.0 | 4.74e-01 | 87.1% | 98.9% |
| 4931221 | 7584.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins | 0.58 | 52.0 | 3.69e-01 | 99.1% | 39.7% |
| 4221282 | 7533.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate kinase domain 2 › Phosphoglycerate kinase domain 2 › Phosphoglycerate kinase domain 2 › PGK | 0.58 | 50.0 | 3.99e-01 | 94.0% | 89.1% |
| 3679321 | 256.1.1.3 ↗ | a+b two layers › MTH1598-like › MTH1598-like › MTH1598-like › Methyltransf_29 | 0.58 | 31.0 | 3.32e-01 | 71.6% | 59.0% |
| 4983503 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.58 | 42.0 | 4.60e-01 | 87.1% | 93.7% |
| 119404 | 7563.1.1.5 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related › cpYpsA | 0.58 | 43.0 | 3.92e-01 | 100.0% | 58.2% |
| 5008280 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.58 | 44.0 | 4.65e-01 | 88.8% | 90.5% |
| 4947651 | 2007.1.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like | 0.57 | 48.0 | 3.92e-01 | 90.5% | 97.7% |
| 4991604 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.57 | 44.0 | 4.57e-01 | 89.7% | 87.3% |
| 4988358 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.57 | 50.0 | 4.34e-01 | 99.1% | 87.6% |
| 4928572 | 304.8.1.108 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PDT | 0.57 | 41.0 | 3.57e-01 | 85.3% | 47.6% |
| 4973228 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.57 | 50.0 | 4.41e-01 | 100.0% | 91.1% |
| 3329754 | 2003.1.5.115 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29 | 0.57 | 51.0 | 4.28e-01 | 99.1% | 77.9% |
| 3467470 | 2003.1.5.154 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_29, Methyltransf_11 | 0.56 | 51.0 | 3.83e-01 | 100.0% | 56.6% |
| 1681145 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.56 | 49.0 | 4.38e-01 | 99.1% | 76.7% |
| 5022709 | 2007.13.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Rossmann-like domains in magnesium chelatase catalytic subunit › Rossmann-like domains in magnesium chelatase catalytic subunit | 0.56 | 46.0 | 3.95e-01 | 89.7% | 94.6% |
| 3782778 | 7523.1.1.5 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › PDT | 0.56 | 44.0 | 4.43e-01 | 87.9% | 82.5% |
| 3243821 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.55 | 48.0 | 3.66e-01 | 99.1% | 69.3% |
| 345204 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.55 | 48.0 | 4.16e-01 | 98.3% | 92.1% |
| 3281775 | 221.1.1.161 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF5703 | 0.55 | 25.0 | 3.70e-01 | 89.7% | 100.0% |
| 4960068 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.55 | 48.0 | 4.24e-01 | 100.0% | 91.7% |
| 3947845 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.54 | 45.0 | 3.72e-01 | 88.8% | 86.3% |
| 5011030 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.54 | 48.0 | 4.33e-01 | 99.1% | 100.0% |
| 4600916 | 2007.1.6.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain | 0.54 | 41.0 | 4.39e-01 | 87.9% | 94.0% |
| 3971456 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.54 | 44.0 | 3.58e-01 | 88.8% | 84.1% |
| 4032362 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.53 | 44.0 | 3.64e-01 | 87.9% | 88.9% |
| 3969891 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.53 | 44.0 | 3.52e-01 | 90.5% | 81.3% |
| 3967534 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.52 | 44.0 | 3.60e-01 | 92.2% | 82.7% |
| 3500743 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.52 | 44.0 | 3.41e-01 | 92.2% | 74.1% |
| 3280936 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.52 | 45.0 | 3.61e-01 | 93.1% | 83.6% |
| 3800573 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.51 | 43.0 | 4.08e-01 | 93.1% | 94.3% |
| 169716 | 2007.1.6.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › Shikimate_dh_N | 0.51 | 38.0 | 4.07e-01 | 87.9% | 91.1% |
| 3965114 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.51 | 40.0 | 3.40e-01 | 87.1% | 98.1% |
| 5033793 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.51 | 32.0 | 3.93e-01 | 86.2% | 100.0% |
| 3259010 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.51 | 44.0 | 4.36e-01 | 97.4% | 96.8% |
| 3284809 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 39.0 | 3.84e-01 | 92.2% | 76.8% |
| 3390425 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.51 | 43.0 | 3.23e-01 | 96.6% | 97.8% |
| 3947519 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.51 | 40.0 | 3.34e-01 | 87.1% | 95.9% |
| 3518086 | 246.3.1.4 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos2 | 0.50 | 45.0 | 3.45e-01 | 100.0% | 87.0% |
| 3971410 | 7523.1.1.15 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate | 0.50 | 39.0 | 3.26e-01 | 82.8% | 96.2% |
D3
medium
residues 1-132
Domain cluster:
rep: NC_074655__YP_010772789.1__QIT52-gp32__00032__D1-135
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13231.13 best | PMT_2 | 27.5 | 4.80e-06 | 55.3% | 41.9% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.71 | 35.0 | 4.19e-01 | 90.9% | 69.3% |
| 2bvlA01 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 27.0 | 3.28e-01 | 73.5% | 59.3% |
| 1u5pA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 28.0 | 3.10e-01 | 72.0% | 50.9% |
| 3bniB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.62 | 40.0 | 3.72e-01 | 81.8% | 50.9% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.62 | 29.0 | 2.17e-01 | 72.0% | 18.4% |
| 4akgA06 | 1.10.8.710 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Dynein motor, AAA1 domain, small subdomain | 0.59 | 34.0 | 3.76e-01 | 95.5% | 68.2% |
| 2hfiA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.57 | 35.0 | 3.63e-01 | 97.0% | 65.0% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.57 | 35.0 | 3.72e-01 | 73.5% | 68.1% |
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 38.0 | 4.02e-01 | 94.7% | 77.6% |
| 8ex5A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.56 | 41.0 | 3.64e-01 | 99.2% | 52.9% |
| 3rrwB01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.54 | 43.0 | 3.88e-01 | 84.1% | 90.1% |
| 2hytA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.54 | 36.0 | 3.21e-01 | 74.2% | 46.1% |
| 6nmnA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 33.0 | 3.35e-01 | 93.2% | 62.5% |
| 1x8zB00 | 1.20.140.40 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein | 0.52 | 34.0 | 3.36e-01 | 94.7% | 59.2% |
| 1oahA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 35.0 | 3.45e-01 | 97.0% | 64.8% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5007754 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.95 | 93.0 | 6.41e-01 | 100.0% | 37.8% |
| 4996734 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.92 | 86.0 | 6.17e-01 | 100.0% | 38.5% |
| 4998805 | 3352.1.1.3 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT | 0.90 | 78.0 | 5.62e-01 | 92.4% | 36.1% |
| 4970070 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.89 | 83.0 | 5.74e-01 | 100.0% | 33.7% |
| 5037416 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.89 | 80.0 | 5.56e-01 | 98.5% | 32.9% |
| 4954813 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.88 | 82.0 | 5.64e-01 | 96.2% | 35.3% |
| 5055716 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.88 | 82.0 | 5.73e-01 | 97.7% | 39.5% |
| 4997031 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.88 | 83.0 | 6.00e-01 | 100.0% | 41.7% |
| 4998356 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.88 | 77.0 | 5.50e-01 | 100.0% | 34.9% |
| 5029189 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.88 | 83.0 | 5.84e-01 | 100.0% | 40.0% |
| 4999910 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.87 | 82.0 | 5.72e-01 | 98.5% | 38.6% |
| 5014124 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.87 | 75.0 | 5.39e-01 | 89.4% | 37.9% |
| 5060319 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.87 | 81.0 | 5.70e-01 | 100.0% | 35.6% |
| 4095794 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.87 | 76.0 | 5.46e-01 | 91.7% | 37.6% |
| 4998643 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.87 | 79.0 | 5.47e-01 | 96.2% | 34.6% |
| 5057545 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.87 | 82.0 | 5.79e-01 | 100.0% | 38.9% |
| 4997120 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.86 | 75.0 | 5.42e-01 | 93.9% | 35.6% |
| 4996376 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.86 | 77.0 | 5.41e-01 | 100.0% | 33.5% |
| 5058350 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.86 | 78.0 | 5.41e-01 | 98.5% | 32.9% |
| 5042141 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.86 | 77.0 | 5.51e-01 | 97.0% | 36.2% |
| 5055953 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.85 | 78.0 | 5.64e-01 | 97.0% | 39.1% |
| 4959788 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.85 | 80.0 | 5.45e-01 | 100.0% | 32.4% |
| 5055841 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.85 | 79.0 | 5.60e-01 | 98.5% | 37.8% |
| 4934594 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.85 | 76.0 | 5.42e-01 | 97.7% | 35.2% |
| 5057069 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.85 | 79.0 | 5.50e-01 | 99.2% | 35.6% |
| 4985425 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.84 | 74.0 | 5.27e-01 | 96.2% | 34.2% |
| 4960823 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.84 | 79.0 | 5.52e-01 | 100.0% | 34.9% |
| 4998769 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.84 | 74.0 | 5.23e-01 | 93.9% | 33.7% |
| 4169109 | 3352.1.1.28 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT+PMT_4TMC | 0.84 | 78.0 | 5.39e-01 | 99.2% | 33.3% |
| 4996462 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.84 | 76.0 | 5.26e-01 | 95.5% | 34.5% |
| 4958183 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.83 | 78.0 | 5.45e-01 | 100.0% | 35.6% |
| 3981680 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.83 | 76.0 | 5.38e-01 | 99.2% | 35.1% |
| 4937693 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.83 | 77.0 | 5.45e-01 | 100.0% | 35.8% |
| 5030341 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.83 | 78.0 | 5.38e-01 | 100.0% | 33.6% |
| 5057612 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.83 | 66.0 | 4.81e-01 | 84.1% | 33.5% |
| 5056131 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.83 | 77.0 | 5.13e-01 | 99.2% | 37.8% |
| 4999479 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.82 | 73.0 | 5.24e-01 | 93.2% | 37.1% |
| 3393707 | 3352.1.1.21 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DIE2_ALG10 | 0.82 | 73.0 | 5.28e-01 | 94.7% | 37.4% |
| 5046268 | 3352.1.1.15 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › GT87 | 0.81 | 73.0 | 5.36e-01 | 96.2% | 38.8% |
| 3192540 | 3352.1.1.21 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DIE2_ALG10 | 0.81 | 75.0 | 5.32e-01 | 100.0% | 43.5% |
| 4963477 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.81 | 76.0 | 5.29e-01 | 100.0% | 36.6% |
| 4997014 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.80 | 73.0 | 5.14e-01 | 98.5% | 33.7% |
| 4968036 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.80 | 72.0 | 5.42e-01 | 100.0% | 42.7% |
| 4076307 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.80 | 70.0 | 4.75e-01 | 93.2% | 28.6% |
| 3744360 | 3352.1.1.21 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DIE2_ALG10 | 0.79 | 70.0 | 4.94e-01 | 93.9% | 33.4% |
| 4975842 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.79 | 73.0 | 5.61e-01 | 100.0% | 47.6% |
| 4949659 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.79 | 72.0 | 5.17e-01 | 98.5% | 35.8% |
| 3212550 | 3352.1.1.9 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans | 0.79 | 69.0 | 5.16e-01 | 91.7% | 45.7% |
| 3337170 | 3352.1.1.9 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans | 0.78 | 69.0 | 4.88e-01 | 93.2% | 34.9% |
| 4941642 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.78 | 71.0 | 4.95e-01 | 96.2% | 33.2% |
| 5028145 | 3352.1.1.1 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 | 0.78 | 72.0 | 5.01e-01 | 99.2% | 33.4% |
| 3842016 | 3352.1.1.9 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans | 0.77 | 68.0 | 4.75e-01 | 93.9% | 33.2% |
| 3929968 | 3352.1.1.9 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Mannosyl_trans | 0.77 | 69.0 | 4.91e-01 | 95.5% | 37.0% |
| 4974387 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.77 | 68.0 | 4.91e-01 | 95.5% | 35.3% |
| 4974797 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.77 | 70.0 | 4.95e-01 | 98.5% | 34.5% |
| 5057621 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.75 | 67.0 | 4.84e-01 | 98.5% | 35.6% |
| 4954027 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.74 | 68.0 | 4.83e-01 | 98.5% | 35.7% |
| 4979710 | 604.39.1.3 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF-ribofla_trS | 0.64 | 46.0 | 4.18e-01 | 74.2% | 68.9% |
| 3277855 | 3562.1.1.3 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › DUF6328 | 0.59 | 41.0 | 3.96e-01 | 70.5% | 90.3% |
| 4028008 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.53 | 41.0 | 3.54e-01 | 97.0% | 52.7% |
D4
medium
residues 274-351
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4zvaA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.67 | 46.0 | 3.70e-01 | 74.4% | 36.9% |
| 1kyqA03 | 1.10.3280.10 | Mainly Alpha › Orthogonal Bundle › Siro heme synthase C-terminal domain-like › Siroheme synthase; domain 3 | 0.64 | 39.0 | 3.89e-01 | 89.7% | 57.1% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.64 | 39.0 | 4.18e-01 | 80.8% | 71.2% |
| 1q90D02 | 1.10.287.980 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › plastocyanin oxidoreductase | 0.61 | 50.0 | 4.79e-01 | 92.3% | 90.3% |
| 3ed5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.59 | 41.0 | 4.01e-01 | 73.1% | 90.5% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.56 | 41.0 | 4.05e-01 | 88.5% | 72.4% |
| 2debB02 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.55 | 46.0 | 3.20e-01 | 94.9% | 66.8% |
| 3llkA02 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.53 | 38.0 | 3.16e-01 | 76.9% | 68.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3600611 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.59 | 39.0 | 3.60e-01 | 82.1% | 53.0% |
| 5032409 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.53 | 41.0 | 4.02e-01 | 82.1% | 89.3% |
| 3979958 | 3009.1.1.0 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like | 0.52 | 36.0 | 3.49e-01 | 73.1% | 86.5% |
| 4010451 | 3788.1.1.15 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PF27202 | 0.50 | 35.0 | 3.57e-01 | 76.9% | 74.7% |