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IMGVR_UViG_3300021492_000027-3300021492-Ga0190336_1000002137

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300021492_000027-3300021492-Ga0190336_1000002137 ↗
Kingdom:: archaea

Quality

71.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-62

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2np2A00	4.10.520.10	Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins	0.71	51.0	4.09e-01	76.5%	38.2%
2lhiA00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.71	46.0	3.20e-01	84.3%	19.3%
1wy9A00	1.10.238.10	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand	0.71	52.0	3.97e-01	94.1%	36.0%
1wtyA00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.64	55.0	4.23e-01	100.0%	43.1%
1yg2A01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.63	50.0	4.30e-01	92.2%	55.7%
2vkpB00	3.30.710.10	Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A	0.63	38.0	3.04e-01	96.1%	27.5%
2rq7A02	6.10.140.480	Special › Helix non-globular › Helix Hairpins ›	0.61	44.0	4.63e-01	92.2%	87.0%
2i53A01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.61	47.0	3.54e-01	98.0%	32.2%
3hssA00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.59	48.0	3.13e-01	96.1%	68.6%
3a1kA01	1.10.20.60	Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Glu-tRNAGln amidotransferase C subunit, N-terminal domain	0.59	39.0	3.93e-01	70.6%	81.5%
2w43A02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.57	48.0	4.70e-01	100.0%	98.2%
2ymmA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.53	45.0	4.05e-01	100.0%	75.3%
4jd9G00	1.10.238.20	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain	0.51	40.0	3.28e-01	100.0%	94.2%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3177267	101.1.1.65 ↗	alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4	0.80	69.0	5.44e-01	94.1%	59.0%
3228016	219.1.1.15 ↗	a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › OTU	0.79	70.0	4.86e-01	100.0%	43.0%
4941755	101.18.1.0 ↗	alpha arrays › HTH › DNA-binding domain of TraM protein › DNA-binding domain of TraM protein	0.76	64.0	5.33e-01	92.2%	72.9%
3362122	2004.1.1.44 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PRK	0.76	54.0	3.47e-01	100.0%	17.0%
3240015	148.1.3.42 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid	0.75	49.0	4.49e-01	86.3%	52.3%
3421207	108.1.1.0 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand	0.71	46.0	4.70e-01	84.3%	68.0%
4961037	103.1.1.0 ↗	alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain	0.68	48.0	4.75e-01	94.1%	69.1%
3785494	101.1.2.352 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5	0.64	47.0	4.14e-01	100.0%	53.3%
3784786	101.1.2.352 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc5	0.57	43.0	4.11e-01	90.2%	69.2%