Back to structures

IMGVR_UViG_3300021492_000027-3300021492-Ga0190336_100000246

Arc-Vir

IMGVR_UViG_3300021492_000027-3300021492-Ga0190336_100000246

Quality

84.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-44
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ip8A00 1.10.132.110 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein 0.89 77.0 5.69e-01 100.0% 39.0%
7nafR01 1.10.1200.240 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › 0.80 62.0 5.94e-01 97.6% 74.0%
3n5lA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.71 63.0 5.67e-01 100.0% 80.7%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 57.0 5.18e-01 97.6% 77.6%
1zu4A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.58 45.0 3.80e-01 100.0% 46.0%
3d36B02 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.55 43.0 4.03e-01 97.6% 72.1%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3492613 3846.1.1.0 alpha bundles › IcmR › IcmR › IcmR 0.73 64.0 6.29e-01 100.0% 100.0%
4186632 4146.1.1.3 alpha bundles › YqgQ-like › YqgQ-like › YqgQ-like › PKHD_C 0.69 60.0 5.94e-01 100.0% 93.3%