←Back to structures

IMGVR_UViG_3300021492_000027-3300021492-Ga0190336_100000292

Arc-Vir

IMGVR_UViG_3300021492_000027-3300021492-Ga0190336_100000292

Identity

Kingdom:
archaea

Quality

88.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-76
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1flgA00 2.140.10.10 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Quinoprotein alcohol dehydrogenase-like superfamily 0.56 47.0 2.75e-01 91.9% 86.8%
6ewnA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 4.14e-01 91.9% 86.9%
2aujD03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.55 41.0 4.32e-01 93.2% 96.8%
1e2tA03 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.54 38.0 3.32e-01 74.3% 77.8%
1shsA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 45.0 4.00e-01 95.9% 76.5%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.54 39.0 2.90e-01 79.7% 30.8%
3og6B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 37.0 3.45e-01 74.3% 85.9%
3oblA00 2.40.128.450 Mainly Beta › Beta Barrel › Lipocalin › 0.53 44.0 3.79e-01 100.0% 89.4%
1iv0A00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.51 34.0 3.20e-01 70.3% 85.7%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 36.0 3.23e-01 75.7% 81.1%
4binA01 2.60.40.3500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.66e-01 93.2% 88.8%
3louA02 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.51 36.0 2.80e-01 77.0% 79.7%
4zfvB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.50 36.0 2.82e-01 78.4% 91.4%
1jkfA03 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.50 34.0 3.67e-01 71.6% 95.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5055486 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.64 52.0 5.08e-01 94.6% 89.4%
3933016 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 48.0 3.22e-01 82.4% 35.9%
3933646 2484.5.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.60 47.0 4.30e-01 85.1% 95.0%
3740947 5.1.4.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.56 43.0 2.76e-01 82.4% 28.9%
3509197 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 46.0 4.44e-01 93.2% 94.1%
3827941 319.1.1.15 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF27746 0.56 46.0 3.88e-01 91.9% 62.3%
3791256 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.56 46.0 4.09e-01 93.2% 72.7%
3815886 319.1.1.18 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF31004 0.55 46.0 4.16e-01 95.9% 92.4%
3509551 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.55 45.0 4.33e-01 93.2% 89.4%
3814715 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 44.0 4.09e-01 91.9% 77.0%
3324935 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 44.0 4.09e-01 93.2% 77.0%
3833506 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 45.0 4.04e-01 93.2% 73.3%
3232476 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 44.0 4.10e-01 93.2% 80.0%
3320089 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.54 41.0 3.47e-01 82.4% 70.4%
5012803 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.54 44.0 3.68e-01 95.9% 60.0%
3940300 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 45.0 3.54e-01 95.9% 49.1%
3650231 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 44.0 3.98e-01 94.6% 86.7%
3500665 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 44.0 4.18e-01 97.3% 87.4%
3332863 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.53 44.0 4.08e-01 97.3% 78.0%
3239567 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 42.0 3.85e-01 95.9% 77.1%
3463349 1.1.1.28 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.51 39.0 2.52e-01 83.8% 31.1%
3166635 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.50 42.0 3.68e-01 98.6% 59.2%
3781462 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.50 41.0 3.55e-01 95.9% 63.3%