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IMGVR_UViG_3300021493_000001-3300021493-Ga0190306_1000018101

Arc-Vir

IMGVR_UViG_3300021493_000001-3300021493-Ga0190306_1000018101

Identity

Kingdom:
archaea

Quality

92.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-78
PDB
Domain cluster: rep: aot2015-SM42_SRR1761719_Peru_trim_clean_trim_clean_scaffold_4_curated_closed_complete_prodigal-single.1__X__X__00007__D7-77
D2 medium residues 84-140
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 55.0 5.25e-01 100.0% 69.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.18e-01 100.0% 69.1%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 5.12e-01 100.0% 72.3%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.51e-01 100.0% 98.0%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 5.07e-01 100.0% 84.5%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 55.0 4.85e-01 100.0% 63.9%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 47.0 4.43e-01 100.0% 61.6%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 47.0 4.61e-01 100.0% 70.3%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 56.0 5.05e-01 100.0% 85.0%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 48.0 4.81e-01 98.2% 79.7%
4a53A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.79e-01 100.0% 79.0%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.73e-01 100.0% 81.4%
5j39A01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 46.0 3.69e-01 82.5% 77.8%
4ii1A01 2.30.30.1190 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 4.80e-01 100.0% 90.0%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 50.0 5.11e-01 100.0% 98.1%
4a4kA02 2.30.30.1160 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 4.09e-01 100.0% 60.2%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 3.80e-01 100.0% 39.8%
1jb0E00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.57 50.0 4.76e-01 100.0% 91.3%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 4.28e-01 100.0% 79.0%
2hq7B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 47.0 3.57e-01 94.7% 76.8%
3hl8A02 3.30.1520.20 Alpha Beta › 2-Layer Sandwich › PX Domain › Exonuclease ExoI, domain 2 0.55 46.0 3.66e-01 100.0% 59.7%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.55 39.0 3.62e-01 75.4% 89.2%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.39e-01 100.0% 96.2%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 4.13e-01 100.0% 82.8%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 44.0 3.55e-01 98.2% 79.8%
6i3gA02 3.90.76.10 Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 0.51 35.0 2.90e-01 75.4% 98.3%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3504417 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 55.0 4.72e-01 100.0% 52.2%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.72 53.0 5.16e-01 100.0% 70.8%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.70 51.0 3.44e-01 100.0% 21.4%
3570700 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 51.0 4.07e-01 100.0% 41.7%
567 4.1.1.48 ↗ beta barrels › SH3 › SH3 › SH3 › DHFR_2 0.66 51.0 5.15e-01 100.0% 86.0%
3409299 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.65 48.0 4.39e-01 100.0% 58.7%
3407855 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 49.0 4.22e-01 100.0% 52.2%
4387111 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 57.0 5.09e-01 100.0% 81.2%
3665882 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.64 50.0 3.83e-01 100.0% 36.3%
2550473 3820.1.1.0 ↗ a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain 0.62 54.0 4.84e-01 100.0% 70.9%
3718969 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.61 53.0 3.79e-01 100.0% 71.4%
3625002 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.60 51.0 3.32e-01 100.0% 23.1%
3684460 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.59 51.0 4.37e-01 100.0% 85.3%
2845037 3820.1.1.3 ↗ a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_PI_C 0.58 51.0 4.50e-01 100.0% 70.6%
3349135 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 50.0 4.33e-01 100.0% 66.7%
3713672 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 47.0 3.88e-01 100.0% 58.3%
2127246 4.8.1.4 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MBT 0.57 45.0 4.27e-01 100.0% 73.9%
3608011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 47.0 3.83e-01 100.0% 58.3%
3908017 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.57 49.0 4.46e-01 100.0% 72.5%
3999729 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.56 49.0 4.28e-01 100.0% 67.4%
3717986 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 47.0 3.86e-01 100.0% 51.3%
3713571 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 46.0 3.91e-01 100.0% 63.8%
3769507 4.1.1.31 ↗ beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.56 44.0 4.18e-01 100.0% 72.9%
3758536 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 45.0 4.27e-01 100.0% 77.1%
3392130 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.55 46.0 4.44e-01 100.0% 84.6%
2126408 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.55 43.0 3.90e-01 100.0% 63.0%
3717236 220.1.1.175 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_31 0.54 48.0 3.60e-01 100.0% 63.4%
3370313 220.1.1.78 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.53 47.0 3.38e-01 100.0% 52.1%
3457163 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.52 40.0 3.72e-01 100.0% 65.0%
3397845 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 44.0 3.70e-01 100.0% 57.1%
2831858 4.1.1.22 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L27e 0.52 42.0 3.52e-01 100.0% 50.8%
3998992 220.1.1.79 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › TBC1D23_C 0.52 41.0 3.32e-01 98.2% 67.4%
4017600 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 42.0 2.62e-01 96.5% 26.6%