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IMGVR_UViG_3300021493_000001-3300021493-Ga0190306_1000018113

Arc-Vir

IMGVR_UViG_3300021493_000001-3300021493-Ga0190306_1000018113

Quality

76.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-76
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1uc8A03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.65 49.0 4.64e-01 82.9% 78.7%
3t7aA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.63 44.0 3.31e-01 75.0% 42.1%
4iwxA03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.62 46.0 4.13e-01 81.6% 84.7%
4xfjA02 3.90.1260.10 Alpha Beta › Alpha-Beta Complex › Argininosuccinate synthetase, chain A, domain 2 › Argininosuccinate synthetase, chain A, domain 2 0.58 45.0 3.51e-01 88.2% 96.8%
1wibA00 3.30.1550.10 Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain 0.56 45.0 4.23e-01 88.2% 84.8%
3kzqA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.54 38.0 2.83e-01 75.0% 92.7%
6j4nC01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 38.0 2.57e-01 77.6% 88.0%
3gnjA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 40.0 3.62e-01 85.5% 77.5%
2nbsA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 41.0 3.67e-01 90.8% 87.1%
1khdD02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.52 38.0 2.81e-01 80.3% 97.8%
1r4wA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 35.0 2.65e-01 72.4% 95.7%
1w2mA02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.51 39.0 2.81e-01 85.5% 97.0%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 40.0 3.16e-01 90.8% 90.5%
6i1cA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 40.0 3.65e-01 90.8% 83.3%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4260969 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.77 55.0 4.43e-01 73.7% 94.1%
4961575 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.76 53.0 4.43e-01 72.4% 95.2%
4961931 2.4.1.7 beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK 0.75 53.0 4.26e-01 72.4% 93.6%
5022273 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 47.0 5.03e-01 77.6% 98.5%
4373021 2.4.1.6 beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.64 44.0 4.04e-01 71.1% 94.9%
3356215 2487.1.1.17 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › GWD1_pHisD 0.64 51.0 4.35e-01 85.5% 93.3%
4962616 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.63 47.0 3.23e-01 81.6% 32.3%
3365075 206.1.3.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.61 45.0 3.17e-01 78.9% 35.6%
3593795 3781.1.1.0 a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain 0.61 47.0 4.72e-01 82.9% 100.0%
4957116 206.1.3.31 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RLAN 0.60 43.0 3.16e-01 75.0% 27.6%
5017005 206.1.3.31 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RLAN 0.60 44.0 3.60e-01 81.6% 40.6%
3737433 206.1.3.21 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK 0.59 45.0 3.16e-01 82.9% 36.5%
5005393 206.1.3.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp 0.59 42.0 3.39e-01 75.0% 37.9%
3275167 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.56 48.0 4.05e-01 100.0% 79.3%
2905 3781.1.1.1 a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain › Ribosomal_L11_N 0.56 45.0 4.23e-01 88.2% 84.8%
4528719 4.1.1.438 beta barrels › SH3 › SH3 › SH3 › PF27440 0.55 33.0 3.57e-01 81.6% 70.8%
4958053 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.54 40.0 3.60e-01 81.6% 88.7%
4973193 802.1.1.1 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom 0.53 31.0 3.05e-01 80.3% 51.8%
3764119 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 44.0 4.17e-01 98.7% 80.0%
4001920 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 42.0 4.18e-01 92.1% 87.5%
3798939 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 40.0 3.55e-01 85.5% 74.8%
4028637 2485.1.1.1 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin 0.51 40.0 3.66e-01 90.8% 83.6%
3979983 2485.1.1.62 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › TrbC_Ftype 0.50 41.0 3.42e-01 92.1% 92.9%
D2 high residues 207-283
PDB
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.77 52.0 3.33e-01 70.1% 22.2%
7obmA01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.71 48.0 3.16e-01 70.1% 23.7%
4q1vA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.71 52.0 3.19e-01 76.6% 33.5%
4exrA01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.71 48.0 4.76e-01 70.1% 74.1%
7ne4A01 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.70 51.0 3.28e-01 76.6% 28.9%
3u1wA01 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 52.0 3.95e-01 80.5% 48.6%
1c5kA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.69 47.0 3.19e-01 70.1% 26.7%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 51.0 4.21e-01 79.2% 63.8%
1g29102 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 40.0 5.12e-01 76.6% 100.0%
4hbrA00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 50.0 4.14e-01 79.2% 63.6%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.66 48.0 3.25e-01 76.6% 42.3%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 38.0 4.81e-01 76.6% 100.0%
3nvoA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.64 39.0 3.21e-01 75.3% 35.1%
2g30A02 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.63 52.0 4.53e-01 88.3% 64.7%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.63 43.0 2.85e-01 70.1% 24.0%
4p78C00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.63 45.0 4.74e-01 90.9% 89.4%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 42.0 4.04e-01 70.1% 76.9%
5zg8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 42.0 3.84e-01 70.1% 74.5%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 43.0 4.05e-01 71.4% 76.1%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 53.0 4.35e-01 94.8% 78.7%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.62 44.0 3.01e-01 75.3% 32.8%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.61 40.0 4.31e-01 76.6% 77.6%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 45.0 3.79e-01 80.5% 63.8%
1l0wA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 41.0 3.68e-01 70.1% 73.6%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 50.0 5.03e-01 97.4% 90.8%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 40.0 4.44e-01 85.7% 88.5%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 40.0 3.64e-01 70.1% 72.4%
4l5rC02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 40.0 3.88e-01 71.4% 78.7%
8a9xA01 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.59 48.0 4.89e-01 98.7% 89.3%
3cwxA00 3.40.1420.20 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Pathogenicity island component CagD 0.59 51.0 4.42e-01 100.0% 87.2%
1d4tA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 50.0 4.55e-01 96.1% 93.3%
7nn3B01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.58 50.0 3.34e-01 98.7% 76.8%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 36.0 4.15e-01 81.8% 92.5%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 51.0 4.37e-01 97.4% 94.2%
3doaA01 2.30.310.10 Mainly Beta › Roll › ibrinogen binding protein from staphylococcus aureus fold › ibrinogen binding protein from staphylococcus aureus domain 0.57 46.0 3.76e-01 89.6% 46.4%
3f6gA01 3.30.160.740 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 40.0 4.52e-01 80.5% 98.3%
2r5vA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.57 41.0 3.38e-01 76.6% 71.3%
1e8cA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.57 48.0 3.44e-01 94.8% 50.8%
3en8A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 50.0 4.41e-01 97.4% 92.9%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 43.0 3.41e-01 81.8% 86.5%
1fgsA01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.56 47.0 3.22e-01 93.5% 29.2%
2ablA02 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 47.0 4.39e-01 96.1% 93.8%
2e8gA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 41.0 3.62e-01 80.5% 69.8%
3us4A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.55 46.0 4.36e-01 96.1% 92.8%
4huzA02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 40.0 3.27e-01 77.9% 72.8%
4qdiA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.55 45.0 3.27e-01 92.2% 34.5%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.49e-01 80.5% 91.4%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.54 47.0 4.29e-01 100.0% 79.0%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.54 39.0 3.19e-01 77.9% 44.7%
1uv7A00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.54 41.0 4.16e-01 98.7% 82.9%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 45.0 4.20e-01 93.5% 76.3%
3dxpA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 43.0 4.13e-01 90.9% 97.8%
4bubA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.54 45.0 3.27e-01 94.8% 48.3%
8f5dA05 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.53 46.0 3.33e-01 96.1% 36.2%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.53 43.0 4.01e-01 90.9% 94.0%
4a18P00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.53 32.0 3.46e-01 77.9% 71.2%
4c12A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.53 45.0 3.19e-01 93.5% 50.4%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.61e-01 85.7% 68.0%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 40.0 3.38e-01 83.1% 94.8%
2l33A00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 43.0 4.15e-01 96.1% 81.3%
3zl8A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 44.0 3.13e-01 93.5% 83.2%
2ppqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 41.0 3.93e-01 92.2% 96.8%
3zm6A02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.51 42.0 3.08e-01 93.5% 48.9%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3508531 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.81 52.0 6.30e-01 71.4% 100.0%
157024 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.77 52.0 3.21e-01 70.1% 18.2%
1260456 283.1.1.3 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase 0.76 48.0 4.70e-01 79.2% 59.8%
None 0.75 51.0 2.94e-01 70.1% 11.1%
3291828 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.75 51.0 3.20e-01 70.1% 26.5%
3659799 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.74 53.0 2.99e-01 74.0% 22.4%
2754825 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.74 50.0 3.11e-01 70.1% 17.9%
5014688 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.73 50.0 5.76e-01 92.2% 100.0%
5014686 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.73 50.0 5.71e-01 70.1% 98.2%
4991507 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.73 49.0 3.20e-01 70.1% 22.2%
4958522 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.73 52.0 5.61e-01 97.4% 89.2%
3963711 7579.1.1.0 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.73 49.0 2.85e-01 70.1% 12.8%
5054046 809.2.1.0 a+b two layers › BLIP-like › BT0923-like › BT0923-like 0.72 54.0 5.97e-01 77.9% 100.0%
4960423 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.72 45.0 2.92e-01 70.1% 14.3%
3961795 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.71 52.0 3.18e-01 76.6% 29.1%
5019086 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 45.0 2.91e-01 70.1% 14.8%
2800366 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.71 48.0 3.12e-01 70.1% 22.3%
4027965 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.71 48.0 3.12e-01 70.1% 19.4%
5062107 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 48.0 3.19e-01 70.1% 24.3%
4008203 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 50.0 2.90e-01 74.0% 18.6%
4950355 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.70 47.0 3.08e-01 70.1% 22.1%
3829694 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.70 48.0 3.10e-01 70.1% 22.5%
3712575 331.9.1.2 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › B2-adapt-app_C 0.70 57.0 4.79e-01 87.0% 62.1%
5019907 5.1.5.233 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PD40 0.70 44.0 2.94e-01 70.1% 16.1%
3831470 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.70 47.0 3.17e-01 70.1% 21.8%
4946333 5.1.3.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › AXE1 0.69 47.0 2.94e-01 70.1% 19.2%
5074419 512.1.1.1 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.69 52.0 5.61e-01 97.4% 96.9%
5019409 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.69 47.0 3.05e-01 70.1% 25.3%
4275064 5.1.2.61 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › PF26549 0.68 46.0 4.09e-01 70.1% 58.2%
5009180 5.1.3.127 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Tricorn_N 0.68 46.0 3.05e-01 70.1% 27.2%
5019567 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.68 46.0 2.95e-01 70.1% 20.3%
3665959 5.1.3.68 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 0.67 46.0 2.91e-01 70.1% 18.6%
4240410 2008.1.1.0 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.67 55.0 4.36e-01 87.0% 70.0%
5004346 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.67 53.0 5.20e-01 87.0% 84.7%
4216985 331.19.1.2 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N 0.66 53.0 5.19e-01 87.0% 82.4%
3484246 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.66 45.0 2.85e-01 70.1% 15.7%
4122018 4099.1.1.10 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med1 0.65 55.0 5.10e-01 96.1% 95.0%
3168452 331.10.2.3 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 0.65 55.0 5.10e-01 100.0% 99.0%
3386971 3675.1.1.0 a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain 0.64 46.0 3.81e-01 80.5% 43.8%
5005555 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.64 49.0 3.33e-01 84.4% 39.7%
3606615 241.10.1.0 a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain 0.63 53.0 5.12e-01 94.8% 91.1%
3823899 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 45.0 3.13e-01 74.0% 51.0%
4946001 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.63 46.0 2.95e-01 76.6% 31.8%
3463561 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.62 45.0 2.88e-01 76.6% 36.0%
3615124 5.1.3.28 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.62 44.0 2.81e-01 74.0% 21.1%
3962450 9.27.1.0 beta barrels › Lipocalins/Streptavidin › LpqH › LpqH 0.62 49.0 4.51e-01 88.3% 85.7%
5013018 274.1.1.0 a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.61 47.0 4.04e-01 85.7% 61.5%
5045363 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.61 51.0 3.25e-01 97.4% 20.0%
4056032 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.59 50.0 3.58e-01 92.2% 37.3%
4357660 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.29e-01 97.4% 23.7%
5028385 316.1.1.18 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › AbiEii 0.59 45.0 3.22e-01 80.5% 30.4%
4002401 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.59 52.0 4.73e-01 100.0% 95.2%
3433209 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.59 52.0 4.70e-01 100.0% 90.5%
3549076 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.58 51.0 4.67e-01 100.0% 92.4%
4165734 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.58 49.0 3.45e-01 93.5% 49.2%
3452782 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 45.0 3.52e-01 85.7% 68.1%
3383999 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 44.0 3.03e-01 85.7% 34.3%
5044599 5.1.4.14 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N 0.55 50.0 2.89e-01 100.0% 11.5%
6668 4036.1.1.1 a+b two layers › Insertion domain in adenylylcyclase toxin (the edema factor) › Insertion domain in adenylylcyclase toxin (the edema factor) › Insertion domain in adenylylcyclase toxin (the edema factor) › Anthrax_toxA 0.55 39.0 3.31e-01 76.6% 49.6%
4450167 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.55 47.0 3.29e-01 94.8% 46.3%
3549045 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.55 44.0 3.93e-01 90.9% 61.8%
4052436 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.55 46.0 3.25e-01 93.5% 46.1%
4442089 5.1.7.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.54 48.0 2.69e-01 100.0% 35.6%
4285199 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.54 48.0 4.52e-01 100.0% 89.5%
4174059 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.54 45.0 3.24e-01 93.5% 50.6%
5045322 331.6.1.0 a+b two layers › TBP-like › MoaD-related protein, C-terminal domain › MoaD-related protein, C-terminal domain 0.54 44.0 3.78e-01 93.5% 56.0%
1106390 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.54 45.0 3.37e-01 96.1% 89.0%
4096302 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.53 45.0 3.22e-01 96.1% 32.8%
3258975 214.1.1.6 a+b two layers › SH2 › SH2 › SH2 › SH2_2 0.53 45.0 4.25e-01 100.0% 95.0%
3212817 145.1.1.1 alpha arrays › F-box domain › F-box domain › F-box domain › F-box 0.52 40.0 3.29e-01 83.1% 45.3%
4991274 218.4.1.1 a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.52 41.0 3.92e-01 88.3% 88.4%
D3 medium residues 77-149
PDB
D4 medium residues 150-206
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.79 59.0 5.65e-01 78.9% 75.4%
3cjhI00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.75 53.0 5.50e-01 75.4% 88.9%
3aqbB00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.73 62.0 3.85e-01 94.7% 84.4%
8be0A01 3.40.91.90 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain 0.68 51.0 3.56e-01 80.7% 76.4%
3akjA02 1.10.1070.20 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › 0.68 56.0 3.86e-01 93.0% 57.2%
3ejbH02 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.66 50.0 3.21e-01 80.7% 19.1%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.66 48.0 3.45e-01 78.9% 70.1%
3uwcA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.57 42.0 3.22e-01 78.9% 53.9%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3244185 381.1.1.1 few secondary structure elements › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › Inhibitor of apoptosis (IAP) repeat › BIR 0.83 62.0 4.56e-01 78.9% 87.1%
3601412 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 55.0 3.26e-01 73.7% 10.3%
3785454 4006.1.1.0 alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain 0.83 67.0 5.34e-01 91.2% 46.7%
3600712 192.5.1.0 alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat 0.80 66.0 5.67e-01 87.7% 58.8%
5054405 606.1.1.1 alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop 0.76 67.0 5.52e-01 98.2% 73.0%
5061943 101.11.1.0 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.75 55.0 4.21e-01 80.7% 35.2%
3465927 622.4.1.0 alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related 0.75 55.0 4.91e-01 86.0% 56.2%
3832382 5069.1.3.60 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › OST3_OST6 0.74 59.0 4.54e-01 84.2% 40.8%
3995128 3722.1.1.0 alpha bundles › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain › Protein regulator of cytokinesis 1 (PRC1) rod domain 0.74 60.0 3.83e-01 86.0% 24.3%
3176858 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.73 66.0 4.90e-01 100.0% 72.9%
3783116 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 44.0 3.94e-01 80.7% 47.5%
3787128 109.4.1.654 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TFB6 0.66 55.0 3.77e-01 100.0% 47.8%
5026365 150.1.1.3 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin 0.65 57.0 4.32e-01 100.0% 97.9%
3226769 386.1.1.0 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers 0.58 40.0 3.77e-01 98.2% 60.0%