←Back to structures
IMGVR_UViG_3300021493_000001-3300021493-Ga0190306_1000018119
Arc-VirIMGVR_UViG_3300021493_000001-3300021493-Ga0190306_1000018119
Identity
- Kingdom:
- archaea
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 2-91
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 50.0 | 5.35e-01 | 73.3% | 81.8% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 45.0 | 4.95e-01 | 95.6% | 80.8% |
| 4okvE00 | 6.10.140.1890 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 42.0 | 4.99e-01 | 91.1% | 86.2% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 51.0 | 3.66e-01 | 81.1% | 45.7% |
| 3g80A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.66 | 40.0 | 4.38e-01 | 92.2% | 74.0% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.66 | 40.0 | 4.57e-01 | 95.6% | 84.4% |
| 3e9lA02 | 1.20.80.40 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › Prp8 RNase H domain, fingers region | 0.66 | 46.0 | 4.51e-01 | 100.0% | 67.4% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 46.0 | 4.93e-01 | 90.0% | 86.7% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 36.0 | 3.75e-01 | 94.4% | 61.0% |
| 1jadA00 | 1.20.1230.10 | Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain | 0.63 | 57.0 | 4.18e-01 | 100.0% | 73.6% |
| 2fb5A01 | 1.10.287.770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like | 0.63 | 41.0 | 4.47e-01 | 70.0% | 83.3% |
| 3lssA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.62 | 53.0 | 4.96e-01 | 95.6% | 77.7% |
| 1wleA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.62 | 51.0 | 4.81e-01 | 93.3% | 81.6% |
| 3qphA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 32.0 | 3.19e-01 | 76.7% | 49.5% |
| 5bqnA02 | 1.20.1120.10 | Mainly Alpha › Up-down Bundle › "Clostridium botulinum neurotoxin B, ""coiled-coil"" domain" › "Clostridium botulinum neurotoxin b, ""coiled-coil"" domain" | 0.58 | 50.0 | 3.41e-01 | 98.9% | 89.2% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.58 | 46.0 | 4.46e-01 | 97.8% | 76.8% |
| 4akgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.58 | 51.0 | 4.21e-01 | 100.0% | 66.7% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 47.0 | 4.31e-01 | 92.2% | 82.4% |
| 2uvaG11 | 6.10.60.10 | Special › Helix non-globular › Hydrophobic Seed Protein › | 0.56 | 24.0 | 2.94e-01 | 88.9% | 60.0% |
| 1qviA01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.54 | 40.0 | 3.73e-01 | 78.9% | 90.4% |
| 1p65A00 | 6.10.140.90 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 29.0 | 3.41e-01 | 98.9% | 78.9% |
| 3lv0A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.54 | 34.0 | 2.94e-01 | 100.0% | 40.3% |
| 3oo3A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 47.0 | 3.07e-01 | 100.0% | 31.5% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.51 | 37.0 | 3.35e-01 | 75.6% | 73.6% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3944950 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.71 | 46.0 | 5.38e-01 | 94.4% | 92.3% |
| 3409871 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.69 | 52.0 | 3.21e-01 | 80.0% | 14.6% |
| 3977410 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.68 | 48.0 | 4.78e-01 | 73.3% | 85.3% |
| None | — | 0.68 | 52.0 | 3.95e-01 | 80.0% | 38.0% | |
| 3690565 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.68 | 46.0 | 4.33e-01 | 70.0% | 68.2% |
| 4858611 | 3799.1.1.1 ↗ | alpha bundles › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain › SabA N-terminal extracellular adhesion domain › SabA_adhesion | 0.66 | 58.0 | 4.44e-01 | 100.0% | 51.2% |
| 3603258 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.65 | 59.0 | 4.87e-01 | 98.9% | 96.1% |
| 5013384 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.64 | 58.0 | 4.83e-01 | 100.0% | 58.7% |
| 3741614 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.64 | 51.0 | 4.23e-01 | 86.7% | 60.0% |
| 3724779 | 101.1.2.236 ↗ | alpha arrays › HTH › HTH › winged helix domain › POLR3C_WHD | 0.63 | 54.0 | 4.43e-01 | 94.4% | 61.8% |
| 3171078 | 109.4.1.1932 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › NopRA1, PF26140 | 0.63 | 46.0 | 2.56e-01 | 77.8% | 96.7% |
| 3180179 | 148.1.1.15 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CENP-X | 0.63 | 34.0 | 3.69e-01 | 81.1% | 64.0% |
| 3857357 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.63 | 48.0 | 4.54e-01 | 85.6% | 67.3% |
| 3194355 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.62 | 53.0 | 3.26e-01 | 93.3% | 18.9% |
| 4008034 | 223.1.1.113 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 | 0.62 | 47.0 | 3.85e-01 | 82.2% | 45.3% |
| 4022243 | 101.1.2.517 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.61 | 52.0 | 3.27e-01 | 94.4% | 20.8% |
| 3167160 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 55.0 | 3.35e-01 | 100.0% | 96.9% |
| 5057549 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 53.0 | 4.88e-01 | 100.0% | 73.7% |
| 3698039 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.60 | 45.0 | 4.04e-01 | 80.0% | 76.7% |
| 3675938 | 1021.1.1.0 ↗ | a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases | 0.60 | 32.0 | 3.46e-01 | 94.4% | 58.7% |
| 3917696 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 51.0 | 4.09e-01 | 100.0% | 51.5% |
| 3357244 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.59 | 40.0 | 3.86e-01 | 71.1% | 79.0% |
| 3403813 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.59 | 51.0 | 3.44e-01 | 100.0% | 28.6% |
| 4135068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 52.0 | 3.39e-01 | 100.0% | 95.9% |
| 3401287 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.58 | 51.0 | 3.31e-01 | 100.0% | 54.6% |
| 5047617 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 51.0 | 3.83e-01 | 97.8% | 44.5% |
| 3630104 | 192.24.1.6 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD | 0.57 | 49.0 | 3.31e-01 | 98.9% | 96.6% |
| 3410682 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.56 | 49.0 | 3.36e-01 | 100.0% | 55.5% |
| 3386423 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.54 | 32.0 | 2.77e-01 | 100.0% | 36.4% |
| 2600 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.54 | 45.0 | 3.85e-01 | 100.0% | 56.3% |
| 3271019 | 101.1.2.113 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNase_H2-Ydr279 | 0.53 | 39.0 | 3.48e-01 | 93.3% | 54.4% |
| 3954591 | 1075.1.2.3 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › DUF2567 | 0.53 | 47.0 | 3.89e-01 | 97.8% | 81.9% |
| 3239087 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.52 | 49.0 | 4.46e-01 | 100.0% | 88.7% |