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IMGVR_UViG_3300021493_000001-3300021493-Ga0190306_100001844
Arc-VirIMGVR_UViG_3300021493_000001-3300021493-Ga0190306_100001844
Identity
- Kingdom:
- archaea
Quality
78.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-125
Domain cluster:
rep: NC_074638__YP_010772041.1__QIT35-gp51__00051__D625-736
D2
high
residues 927-1047
Domain cluster:
rep: IMGVR_UViG_3300021587_000025-3300021587-Ga0190351_100000144__D595-732
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hivA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 55.0 | 5.05e-01 | 100.0% | 88.2% |
| 6p0cA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 55.0 | 5.12e-01 | 100.0% | 91.8% |
| 3i7fA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 33.0 | 3.31e-01 | 71.9% | 60.2% |
| 1eovA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 33.0 | 3.27e-01 | 71.9% | 59.0% |
| 4jg2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 35.0 | 3.10e-01 | 72.7% | 71.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598978 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 55.0 | 5.01e-01 | 86.8% | 85.6% |
| 3197681 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.67 | 57.0 | 4.94e-01 | 90.1% | 80.3% |
| 3393802 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.65 | 55.0 | 4.95e-01 | 90.1% | 84.8% |
| 4914260 | 2.1.1.31 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_ligase_A_C | 0.61 | 46.0 | 4.67e-01 | 77.7% | 100.0% |
| 2440770 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 51.0 | 5.16e-01 | 92.6% | 89.8% |
| 4027863 | 2.1.1.28 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › mRNA_cap_C | 0.55 | 46.0 | 4.47e-01 | 87.6% | 81.5% |
| 3605286 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.51 | 30.0 | 3.25e-01 | 92.6% | 69.0% |
| 3782529 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.51 | 34.0 | 3.00e-01 | 71.9% | 46.9% |
D3
high
residues 1054-1162
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02579.23 best | Nitro_FeMo-Co | 35.3 | 1.70e-08 | 78.9% | 95.7% |
CATH (66)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wfbA00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.92 | 78.0 | 7.53e-01 | 88.1% | 85.8% |
| 1o13A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.89 | 75.0 | 7.66e-01 | 88.1% | 97.2% |
| 2yx6D01 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.89 | 75.0 | 7.77e-01 | 88.1% | 97.1% |
| 1p90A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.83 | 70.0 | 6.69e-01 | 88.1% | 81.3% |
| 2re2A00 | 3.30.420.130 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain | 0.83 | 70.0 | 6.82e-01 | 88.1% | 83.1% |
| 3thxB02 | 3.30.420.110 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › MutS, connector domain | 0.70 | 64.0 | 5.72e-01 | 100.0% | 87.5% |
| 4b28A01 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.66 | 52.0 | 4.21e-01 | 82.6% | 65.8% |
| 1g8mA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.65 | 50.0 | 4.18e-01 | 79.8% | 73.9% |
| 4py5A02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 50.0 | 4.06e-01 | 83.5% | 69.7% |
| 2q2qF00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 50.0 | 3.88e-01 | 88.1% | 87.8% |
| 4ehiA02 | 3.40.140.20 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › AICAR transformylase, duplication domain | 0.61 | 49.0 | 4.29e-01 | 84.4% | 70.5% |
| 2n3zA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 48.0 | 5.00e-01 | 96.3% | 92.9% |
| 7c2xA01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.60 | 50.0 | 3.67e-01 | 88.1% | 92.8% |
| 5f33A03 | 3.40.50.10800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NadA-like | 0.60 | 35.0 | 3.96e-01 | 77.1% | 75.0% |
| 1z9bA01 | 3.40.50.10050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Translation initiation factor IF- 2, domain 3 | 0.60 | 42.0 | 4.70e-01 | 77.1% | 94.0% |
| 2vldA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.58 | 42.0 | 4.24e-01 | 74.3% | 99.1% |
| 5nusA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.58 | 47.0 | 3.80e-01 | 87.2% | 96.7% |
| 3wsfA02 | 3.40.1390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › NIF3 (NGG1p interacting factor 3)-like | 0.58 | 41.0 | 4.04e-01 | 72.5% | 98.3% |
| 1nm2A02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.58 | 47.0 | 3.67e-01 | 86.2% | 99.6% |
| 2rirE01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 47.0 | 4.22e-01 | 88.1% | 90.7% |
| 1nmoA02 | 3.40.1390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › NIF3 (NGG1p interacting factor 3)-like | 0.57 | 41.0 | 3.99e-01 | 74.3% | 97.5% |
| 2qvgA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 46.0 | 4.43e-01 | 88.1% | 94.5% |
| 2b0cA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.57 | 46.0 | 4.36e-01 | 88.1% | 95.5% |
| 3mbhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.57 | 47.0 | 3.49e-01 | 90.8% | 93.8% |
| 2dstA00 | 3.40.50.12270 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 45.0 | 4.40e-01 | 88.1% | 77.0% |
| 5gudA03 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 44.0 | 3.86e-01 | 82.6% | 93.9% |
| 7pvaB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 46.0 | 4.48e-01 | 88.1% | 94.1% |
| 4cn8A02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.56 | 45.0 | 3.82e-01 | 87.2% | 91.6% |
| 7wvzA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.56 | 47.0 | 3.32e-01 | 90.8% | 99.4% |
| 1k68A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 45.0 | 4.20e-01 | 88.1% | 90.7% |
| 2fywA02 | 3.40.1390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Udp-n-acetylmuramoylalanyl-d-glutamate--2,6- Diaminopimelate Ligase; Chain: A, domain 1 › NIF3 (NGG1p interacting factor 3)-like | 0.56 | 40.0 | 3.87e-01 | 73.4% | 98.4% |
| 4iv5A01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.56 | 44.0 | 4.01e-01 | 88.1% | 61.8% |
| 6ks6E03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.56 | 45.0 | 3.97e-01 | 96.3% | 58.7% |
| 2pl1A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 45.0 | 4.39e-01 | 88.1% | 93.3% |
| 4d6yA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 45.0 | 4.38e-01 | 88.1% | 94.2% |
| 2hcuA00 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.55 | 46.0 | 3.89e-01 | 89.0% | 80.2% |
| 2i6xA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.55 | 45.0 | 4.22e-01 | 88.1% | 92.5% |
| 3h5eA00 | 3.20.19.10 | Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 | 0.55 | 45.0 | 4.04e-01 | 89.0% | 90.9% |
| 3luaA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 4.28e-01 | 88.1% | 92.0% |
| 1a6dA03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.55 | 47.0 | 4.14e-01 | 90.8% | 85.6% |
| 4hheA02 | 3.40.50.10800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NadA-like | 0.55 | 36.0 | 3.70e-01 | 100.0% | 69.5% |
| 3eodA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 44.0 | 4.37e-01 | 88.1% | 91.3% |
| 3mmzC00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 45.0 | 3.97e-01 | 89.9% | 92.6% |
| 4dadA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 4.19e-01 | 88.1% | 89.8% |
| 3eagA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 41.0 | 4.45e-01 | 99.1% | 93.5% |
| 3crnA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 4.18e-01 | 88.1% | 83.7% |
| 1p2fA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 4.29e-01 | 88.1% | 91.6% |
| 4inoA01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.54 | 44.0 | 4.17e-01 | 89.9% | 83.1% |
| 3hdgA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 44.0 | 4.22e-01 | 88.1% | 86.3% |
| 2csuA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.54 | 43.0 | 4.01e-01 | 88.1% | 82.3% |
| 6ks6g03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.54 | 47.0 | 4.15e-01 | 93.6% | 86.3% |
| 3ktoA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 43.0 | 4.18e-01 | 88.1% | 92.6% |
| 1i5eA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 39.0 | 3.17e-01 | 77.1% | 53.4% |
| 1duvG01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.53 | 42.0 | 3.87e-01 | 88.1% | 64.0% |
| 7veeA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.53 | 45.0 | 3.22e-01 | 92.7% | 100.0% |
| 3b2nA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 42.0 | 4.16e-01 | 88.1% | 91.7% |
| 4navA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.52 | 45.0 | 3.83e-01 | 97.2% | 87.3% |
| 3cfyA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 41.0 | 3.95e-01 | 88.1% | 83.1% |
| 4am8E01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.51 | 41.0 | 3.62e-01 | 88.1% | 67.7% |
| 1d5wA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 42.0 | 4.05e-01 | 88.1% | 87.8% |
| 3h75A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 37.0 | 3.49e-01 | 77.1% | 67.6% |
| 7jj9A02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.51 | 41.0 | 4.02e-01 | 88.1% | 90.8% |
| 7bvaA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 39.0 | 4.23e-01 | 99.1% | 95.7% |
| 2hi6A00 | 3.50.30.10 | Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › Phosphohistidine domain | 0.51 | 41.0 | 3.92e-01 | 88.1% | 87.9% |
| 3eulB00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 40.0 | 3.92e-01 | 88.1% | 91.1% |
| 3snkA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 40.0 | 3.93e-01 | 88.1% | 94.1% |
ECOD (88)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5036237 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.94 | 80.0 | 7.86e-01 | 88.1% | 89.6% |
| 4984037 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.93 | 79.0 | 7.05e-01 | 88.1% | 73.1% |
| 4955262 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.93 | 79.0 | 7.79e-01 | 88.1% | 87.8% |
| 4985805 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.93 | 79.0 | 7.76e-01 | 88.1% | 93.0% |
| 5003943 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.93 | 79.0 | 7.90e-01 | 88.1% | 91.8% |
| 5020876 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.92 | 79.0 | 7.88e-01 | 88.1% | 91.8% |
| 4957862 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.92 | 79.0 | 7.88e-01 | 88.1% | 91.8% |
| 4933684 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.92 | 78.0 | 7.66e-01 | 88.1% | 92.2% |
| 4944932 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.91 | 78.0 | 7.82e-01 | 88.1% | 92.7% |
| 4952128 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.91 | 77.0 | 7.76e-01 | 88.1% | 92.7% |
| 5012399 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.91 | 77.0 | 7.46e-01 | 88.1% | 85.0% |
| 5045715 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.91 | 77.0 | 7.59e-01 | 88.1% | 87.8% |
| 5049466 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.90 | 77.0 | 7.53e-01 | 88.1% | 87.8% |
| 4955067 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.90 | 76.0 | 7.64e-01 | 88.1% | 95.5% |
| 4947406 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.90 | 76.0 | 7.51e-01 | 88.1% | 89.6% |
| 5042478 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.90 | 76.0 | 7.37e-01 | 88.1% | 82.5% |
| 4960397 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.90 | 76.0 | 7.34e-01 | 88.1% | 87.5% |
| 5024556 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.90 | 72.0 | 7.26e-01 | 83.5% | 96.4% |
| 4957854 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.90 | 76.0 | 7.46e-01 | 88.1% | 90.4% |
| 4979149 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.90 | 76.0 | 7.32e-01 | 88.1% | 89.2% |
| 5052226 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.89 | 75.0 | 7.54e-01 | 88.1% | 86.4% |
| 4957867 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.88 | 74.0 | 7.49e-01 | 88.1% | 87.2% |
| 4959670 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.88 | 75.0 | 7.48e-01 | 88.1% | 90.9% |
| 5004390 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.88 | 74.0 | 7.28e-01 | 88.1% | 82.6% |
| 5045326 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.88 | 75.0 | 7.33e-01 | 88.1% | 92.2% |
| 3602322 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.88 | 75.0 | 7.40e-01 | 88.1% | 88.5% |
| 4986962 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.87 | 73.0 | 7.33e-01 | 88.1% | 92.7% |
| 11249 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.86 | 72.0 | 7.10e-01 | 88.1% | 86.2% |
| 4956002 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.86 | 72.0 | 7.24e-01 | 88.1% | 92.7% |
| 4955184 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.86 | 72.0 | 6.97e-01 | 88.1% | 90.8% |
| 5077742 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.86 | 72.0 | 7.24e-01 | 88.1% | 89.1% |
| 5016993 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.85 | 72.0 | 7.07e-01 | 88.1% | 95.7% |
| 5022810 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.84 | 71.0 | 7.18e-01 | 88.1% | 92.7% |
| 4498693 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.84 | 71.0 | 6.96e-01 | 88.1% | 87.8% |
| 4998732 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.83 | 70.0 | 7.05e-01 | 88.1% | 90.9% |
| 4448966 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.83 | 70.0 | 6.88e-01 | 88.1% | 87.8% |
| 4956244 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.83 | 70.0 | 7.16e-01 | 88.1% | 93.3% |
| 4321268 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.83 | 69.0 | 6.72e-01 | 88.1% | 85.0% |
| 4953094 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.83 | 70.0 | 7.13e-01 | 88.1% | 93.3% |
| 5008651 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.82 | 68.0 | 7.13e-01 | 87.2% | 99.0% |
| 4682721 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.82 | 69.0 | 6.76e-01 | 88.1% | 87.0% |
| 4574694 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.82 | 69.0 | 6.53e-01 | 88.1% | 85.6% |
| 4048389 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.81 | 68.0 | 6.47e-01 | 88.1% | 80.0% |
| 4948821 | 7509.1.1.1 ↗ | a/b three-layered sandwiches › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › DUF34_NIF3 | 0.81 | 40.0 | 4.36e-01 | 78.0% | 57.0% |
| 4990009 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.81 | 68.0 | 6.50e-01 | 89.0% | 94.4% |
| 5016422 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.80 | 67.0 | 6.84e-01 | 88.1% | 95.2% |
| 4578092 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.79 | 66.0 | 6.09e-01 | 88.1% | 80.7% |
| 5001258 | 2484.4.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like | 0.78 | 64.0 | 6.72e-01 | 88.1% | 95.0% |
| 4236151 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.77 | 64.0 | 6.55e-01 | 88.1% | 95.2% |
| 4254268 | 2484.4.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co | 0.75 | 62.0 | 6.05e-01 | 88.1% | 89.2% |
| 5019894 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.72 | 66.0 | 5.66e-01 | 99.1% | 85.9% |
| 4951444 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.71 | 65.0 | 5.80e-01 | 99.1% | 88.7% |
| 4392478 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 51.0 | 5.29e-01 | 81.7% | 85.0% |
| 5030638 | 2492.1.1.16 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › TM1506 | 0.64 | 47.0 | 4.41e-01 | 77.1% | 71.9% |
| 5023939 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 52.0 | 5.21e-01 | 89.9% | 88.2% |
| 3349855 | 7512.1.1.77 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_N | 0.63 | 47.0 | 4.23e-01 | 78.0% | 88.7% |
| 5048941 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 48.0 | 5.00e-01 | 98.2% | 89.0% |
| 4312312 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.62 | 50.0 | 4.75e-01 | 89.9% | 73.6% |
| 4194688 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.61 | 49.0 | 4.81e-01 | 89.9% | 80.0% |
| 4605776 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.61 | 48.0 | 4.86e-01 | 89.9% | 83.6% |
| 4111135 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.61 | 48.0 | 4.79e-01 | 89.9% | 80.0% |
| 4945842 | 7509.1.1.0 ↗ | a/b three-layered sandwiches › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like | 0.61 | 44.0 | 4.29e-01 | 73.4% | 99.2% |
| 3969430 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.61 | 45.0 | 3.79e-01 | 78.0% | 62.8% |
| 4972251 | 7509.1.1.1 ↗ | a/b three-layered sandwiches › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › DUF34_NIF3 | 0.60 | 43.0 | 4.16e-01 | 73.4% | 99.2% |
| 3192036 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.60 | 47.0 | 4.30e-01 | 88.1% | 62.8% |
| 4177976 | 2487.1.1.3 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › Aconitase_C | 0.60 | 46.0 | 4.51e-01 | 89.9% | 74.8% |
| 3818658 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.60 | 48.0 | 4.45e-01 | 89.9% | 68.1% |
| 5029659 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.59 | 43.0 | 4.26e-01 | 75.2% | 94.8% |
| 4462905 | 7526.1.1.1 ↗ | a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 | 0.59 | 47.0 | 4.65e-01 | 89.9% | 80.9% |
| 4626033 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.58 | 42.0 | 4.13e-01 | 75.2% | 90.0% |
| 5065043 | 7509.1.1.1 ↗ | a/b three-layered sandwiches › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › NIF3 (NGG1p interacting factor 3)-like › DUF34_NIF3 | 0.58 | 41.0 | 3.79e-01 | 71.6% | 98.5% |
| 4945273 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 42.0 | 4.24e-01 | 75.2% | 99.1% |
| 5081150 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.56 | 46.0 | 4.25e-01 | 88.1% | 82.1% |
| 4962383 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.55 | 45.0 | 3.92e-01 | 88.1% | 70.3% |
| 4958431 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 39.0 | 3.91e-01 | 73.4% | 99.1% |
| 5022819 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 40.0 | 3.99e-01 | 75.2% | 92.2% |
| 3576071 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.55 | 40.0 | 4.34e-01 | 99.1% | 91.1% |
| 3974816 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.54 | 44.0 | 3.62e-01 | 89.0% | 75.1% |
| 3587804 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.54 | 43.0 | 3.90e-01 | 88.1% | 72.9% |
| 4881878 | 2492.1.1.16 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › TM1506 | 0.54 | 36.0 | 3.62e-01 | 75.2% | 66.1% |
| 391008 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.54 | 47.0 | 3.56e-01 | 100.0% | 91.7% |
| 4964951 | 2007.15.1.18 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase › DUF7509 | 0.54 | 43.0 | 3.75e-01 | 87.2% | 79.4% |
| 4943284 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 42.0 | 3.98e-01 | 82.6% | 85.4% |
| 5000028 | 7512.1.1.30 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 | 0.53 | 39.0 | 3.33e-01 | 78.0% | 61.6% |
| 4943043 | 2007.1.3.71 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › PAS_4 | 0.53 | 42.0 | 4.00e-01 | 87.2% | 86.2% |
| 5000381 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.52 | 38.0 | 3.67e-01 | 75.2% | 90.4% |
| 5000285 | 3407.1.1.2 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc | 0.51 | 44.0 | 4.12e-01 | 100.0% | 77.0% |
| 4994615 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.50 | 44.0 | 4.13e-01 | 95.4% | 96.3% |
D4
high
residues 1525-1671
Domain cluster:
rep: rifoxyb1_full_scaffold_4_prodigal-single.1__X__X__00018__D59-190
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 32.0 | 4.07e-01 | 100.0% | 87.8% |
| 3lq6A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.57 | 28.0 | 3.22e-01 | 70.7% | 59.6% |
| 2z13A00 | 2.30.29.170 | Mainly Beta › Roll › PH-domain like › | 0.57 | 38.0 | 4.19e-01 | 83.7% | 83.8% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.55 | 49.0 | 4.63e-01 | 100.0% | 79.7% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 39.0 | 3.78e-01 | 71.4% | 92.5% |
| 2opjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 33.0 | 4.09e-01 | 92.5% | 100.0% |
| 1u5uA00 | 2.40.180.10 | Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain | 0.53 | 47.0 | 3.59e-01 | 100.0% | 82.5% |
| 1cr5B02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.53 | 31.0 | 3.73e-01 | 98.0% | 89.5% |
| 2oqbA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 33.0 | 3.72e-01 | 72.1% | 84.3% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.52 | 29.0 | 3.50e-01 | 74.8% | 80.0% |
| 1zvcA00 | 2.40.480.10 | Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like | 0.52 | 41.0 | 3.92e-01 | 83.7% | 100.0% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.51 | 37.0 | 3.81e-01 | 73.5% | 80.9% |
| 6i7sG01 | 2.30.230.10 | Mainly Beta › Roll › Lipovitellin-phosvitin complex; beta-sheet shell regions › Lipovitellin; beta-sheet shell regions, chain A | 0.51 | 44.0 | 3.70e-01 | 93.9% | 100.0% |
| 1s3rA04 | 2.60.40.1430 | Mainly Beta › Sandwich › Immunoglobulin-like › Perfringolysin, domain 4 | 0.51 | 28.0 | 3.14e-01 | 86.4% | 66.7% |
| 4frxA01 | 2.40.160.10 | Mainly Beta › Beta Barrel › Porin › Porin | 0.51 | 36.0 | 2.68e-01 | 73.5% | 99.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 998899 | 58.2.1.1 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain › LigD_N | 0.89 | 68.0 | 7.62e-01 | 99.3% | 98.3% |
| 3959638 | 58.2.1.0 ↗ | beta barrels › Oncogene product-like › LigD phosphoesterase domain › LigD phosphoesterase domain | 0.82 | 69.0 | 6.99e-01 | 100.0% | 88.3% |
| 3609858 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.59 | 38.0 | 4.38e-01 | 85.0% | 89.5% |
| 5074611 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.57 | 31.0 | 4.13e-01 | 84.4% | 97.5% |
| 1833882 | 9.4.1.3 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains › Pab87_oct | 0.57 | 30.0 | 3.62e-01 | 95.2% | 77.4% |
| 3406725 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.56 | 43.0 | 3.50e-01 | 78.2% | 91.1% |
| 4890881 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.56 | 40.0 | 4.28e-01 | 72.8% | 88.1% |
| 3391330 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.56 | 39.0 | 4.31e-01 | 72.8% | 88.3% |
| 3591170 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.55 | 38.0 | 4.16e-01 | 72.8% | 87.5% |
| 3385673 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.54 | 39.0 | 3.86e-01 | 74.8% | 95.0% |
| 3592053 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.54 | 46.0 | 4.07e-01 | 90.5% | 96.7% |
| 3895724 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.53 | 46.0 | 3.81e-01 | 95.9% | 94.2% |
| 3506244 | 5084.1.1.16 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom | 0.53 | 38.0 | 3.59e-01 | 72.8% | 100.0% |
| 2505848 | 1.2.1.2 ↗ | beta barrels › cradle loop barrel › Capsid protein protrusion (P) domain › Capsid protein protrusion (P) domain › Calici_coat_C | 0.53 | 29.0 | 2.96e-01 | 83.0% | 51.4% |
| 3597380 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 37.0 | 4.05e-01 | 85.7% | 88.3% |
| 5029082 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 45.0 | 4.28e-01 | 94.6% | 79.4% |
| 4039744 | 5084.3.1.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter | 0.52 | 38.0 | 2.92e-01 | 74.1% | 86.2% |
| 145377 | 5084.1.1.10 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl | 0.52 | 36.0 | 3.65e-01 | 71.4% | 99.3% |
| 3739950 | 868.1.1.0 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related | 0.52 | 43.0 | 4.10e-01 | 89.1% | 100.0% |
| 3165475 | 5084.1.1.4 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity | 0.51 | 36.0 | 3.56e-01 | 72.1% | 100.0% |
| 4344924 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.51 | 46.0 | 4.09e-01 | 100.0% | 84.8% |
| 3249804 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.50 | 46.0 | 4.19e-01 | 100.0% | 83.1% |
D5
medium
residues 138-260
Domain cluster:
rep: KJ746502.1__AID18371.1__PPF1_58__00058__D3-160
D6
medium
residues 383-519_535-547
Domain cluster:
rep: CAKLQF020000010.1__CAH1085069.1__SAMEA5780031_02164__00109__D153-303
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zkpC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.88 | 68.0 | 5.59e-01 | 91.3% | 48.6% |
| 3g1pA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.87 | 66.0 | 5.44e-01 | 91.3% | 47.0% |
| 3a4yA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.78 | 59.0 | 4.90e-01 | 91.3% | 47.0% |
| 7fctA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.78 | 59.0 | 4.98e-01 | 92.0% | 49.4% |
| 2i7tA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.77 | 63.0 | 5.14e-01 | 94.7% | 49.4% |
| 7t28A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.77 | 53.0 | 4.46e-01 | 92.0% | 44.1% |
| 2xr1A03 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.75 | 60.0 | 4.86e-01 | 91.3% | 46.8% |
| 6hrgA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.73 | 60.0 | 5.10e-01 | 92.7% | 55.4% |
| 5ahoA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.71 | 53.0 | 4.83e-01 | 100.0% | 59.7% |
| 1vjnA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.71 | 60.0 | 5.47e-01 | 92.0% | 68.6% |
| 6wo0A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.71 | 57.0 | 5.00e-01 | 99.3% | 59.2% |
| 2i7xA01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.70 | 60.0 | 4.78e-01 | 92.0% | 48.0% |
| 5a0tB01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.69 | 62.0 | 4.89e-01 | 97.3% | 49.1% |
| 6j4nC01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.68 | 62.0 | 4.67e-01 | 97.3% | 42.8% |
| 2wylC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.67 | 60.0 | 4.74e-01 | 98.0% | 48.0% |
| 1wuoA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.60 | 43.0 | 3.78e-01 | 91.3% | 50.7% |
| 1a7tA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.59 | 43.0 | 3.75e-01 | 92.0% | 49.3% |
| 4k3zA00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 51.0 | 4.08e-01 | 98.0% | 72.6% |
| 1uswA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 49.0 | 4.10e-01 | 92.7% | 76.5% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 43.0 | 3.77e-01 | 92.0% | 54.0% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 43.0 | 3.78e-01 | 97.3% | 53.9% |
| 2b81C00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.55 | 49.0 | 3.85e-01 | 98.0% | 63.0% |
| 1sr4B00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.55 | 46.0 | 3.88e-01 | 91.3% | 82.2% |
| 3cwcA02 | 3.90.1510.10 | Alpha Beta › Alpha-Beta Complex › Glycerate kinase, domain 2 › Glycerate kinase, domain 2 | 0.54 | 45.0 | 3.90e-01 | 90.0% | 91.9% |
| 6canA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 45.0 | 3.65e-01 | 91.3% | 71.2% |
| 1jkmA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 47.0 | 3.61e-01 | 97.3% | 78.2% |
| 4gm6A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 47.0 | 3.71e-01 | 96.7% | 76.2% |
| 2xe4A01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 44.0 | 3.36e-01 | 91.3% | 58.3% |
| 4hvtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 3.47e-01 | 92.0% | 69.8% |
| 1e5tA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.49e-01 | 97.3% | 73.1% |
| 2inbA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 38.0 | 4.06e-01 | 94.7% | 91.4% |
ECOD (78)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5071241 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.89 | 74.0 | 5.97e-01 | 92.0% | 49.8% |
| 5007937 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.89 | 66.0 | 5.42e-01 | 91.3% | 46.1% |
| 7906 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.88 | 68.0 | 5.61e-01 | 91.3% | 48.8% |
| 2527352 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.87 | 68.0 | 5.61e-01 | 91.3% | 49.4% |
| 5013540 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.87 | 69.0 | 5.69e-01 | 92.0% | 49.4% |
| 4991631 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.86 | 64.0 | 5.38e-01 | 92.0% | 48.5% |
| 5012973 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.86 | 69.0 | 5.62e-01 | 92.0% | 48.1% |
| 4957787 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.86 | 68.0 | 5.47e-01 | 91.3% | 46.0% |
| 4967085 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.86 | 64.0 | 5.32e-01 | 92.0% | 47.1% |
| 4974729 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.85 | 67.0 | 5.44e-01 | 91.3% | 47.8% |
| 5062359 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.85 | 64.0 | 5.34e-01 | 91.3% | 47.8% |
| 5046887 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.84 | 63.0 | 5.59e-01 | 91.3% | 56.1% |
| 5035603 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.84 | 67.0 | 5.55e-01 | 94.7% | 50.4% |
| 4984298 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.83 | 59.0 | 5.06e-01 | 91.3% | 48.4% |
| 4938111 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.83 | 62.0 | 5.01e-01 | 91.3% | 43.3% |
| 4941336 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.82 | 65.0 | 5.40e-01 | 91.3% | 49.6% |
| 5011865 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.82 | 60.0 | 5.09e-01 | 92.0% | 48.7% |
| 4998129 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.82 | 65.0 | 5.25e-01 | 91.3% | 46.8% |
| 5052119 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.80 | 59.0 | 5.22e-01 | 91.3% | 54.1% |
| 5052402 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.79 | 70.0 | 5.63e-01 | 97.3% | 52.5% |
| 5054512 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.79 | 58.0 | 5.09e-01 | 92.0% | 53.0% |
| 2992268 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.78 | 59.0 | 4.94e-01 | 92.0% | 48.5% |
| 5029445 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.78 | 60.0 | 5.13e-01 | 92.7% | 52.9% |
| 4974332 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.77 | 59.0 | 5.23e-01 | 92.7% | 57.4% |
| 3955348 | 247.1.1.24 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B+Lactamase_B_2 | 0.77 | 65.0 | 5.25e-01 | 91.3% | 49.3% |
| 4253056 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.77 | 65.0 | 5.19e-01 | 91.3% | 47.5% |
| 5068004 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.77 | 67.0 | 5.35e-01 | 91.3% | 57.8% |
| 4347192 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.77 | 65.0 | 5.18e-01 | 91.3% | 47.5% |
| 4982215 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.77 | 67.0 | 5.50e-01 | 91.3% | 55.1% |
| 5022790 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.76 | 65.0 | 5.41e-01 | 92.0% | 55.0% |
| 3974153 | 247.1.1.2 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,RMMBL | 0.76 | 60.0 | 4.83e-01 | 91.3% | 44.7% |
| 4959339 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.76 | 60.0 | 4.54e-01 | 92.0% | 37.3% |
| 4940318 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.76 | 57.0 | 5.25e-01 | 92.0% | 61.6% |
| 4979221 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.76 | 57.0 | 4.83e-01 | 97.3% | 49.8% |
| 3744127 | 247.1.1.9 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL | 0.75 | 59.0 | 5.05e-01 | 96.7% | 53.0% |
| 4314549 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.74 | 59.0 | 4.97e-01 | 92.0% | 51.7% |
| 4937517 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.74 | 61.0 | 4.97e-01 | 91.3% | 48.1% |
| 3803349 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.74 | 60.0 | 4.59e-01 | 91.3% | 40.0% |
| 4274052 | 247.1.1.2 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B,RMMBL | 0.74 | 63.0 | 5.02e-01 | 91.3% | 47.4% |
| 3377662 | 247.1.1.8 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_6 | 0.74 | 58.0 | 4.77e-01 | 90.0% | 47.3% |
| 3251907 | 247.1.1.8 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_6 | 0.74 | 60.0 | 4.64e-01 | 91.3% | 40.6% |
| 5038977 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.74 | 64.0 | 5.08e-01 | 91.3% | 48.6% |
| 3477288 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.73 | 61.0 | 4.70e-01 | 91.3% | 41.9% |
| 4996250 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.72 | 67.0 | 5.09e-01 | 97.3% | 54.9% |
| 3879163 | 247.1.1.31 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_4, Anti-Pycsar_Apyc1 | 0.72 | 66.0 | 4.15e-01 | 96.7% | 22.2% |
| 3848256 | 247.1.1.41 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B, Lactamase_B_4, Anti-Pycsar_Apyc1 | 0.72 | 66.0 | 4.14e-01 | 96.7% | 22.0% |
| 4964321 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.71 | 62.0 | 4.93e-01 | 91.3% | 48.9% |
| 5077506 | 247.1.1.28 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL | 0.71 | 62.0 | 4.91e-01 | 97.3% | 48.3% |
| 3634702 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.70 | 61.0 | 4.46e-01 | 91.3% | 41.1% |
| 3483916 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.70 | 57.0 | 4.16e-01 | 92.7% | 34.1% |
| 3474879 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.70 | 57.0 | 4.93e-01 | 94.7% | 56.9% |
| 4155908 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.69 | 58.0 | 4.54e-01 | 93.3% | 44.3% |
| 3596706 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.69 | 59.0 | 4.37e-01 | 92.0% | 38.0% |
| 3949205 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.69 | 64.0 | 4.83e-01 | 98.7% | 45.5% |
| 4962179 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.68 | 61.0 | 4.99e-01 | 100.0% | 54.6% |
| 4092786 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.68 | 57.0 | 4.47e-01 | 93.3% | 43.9% |
| 3360547 | 247.1.1.9 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › DRMBL | 0.66 | 61.0 | 4.56e-01 | 99.3% | 82.0% |
| 5026983 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.66 | 58.0 | 4.50e-01 | 93.3% | 45.2% |
| 5078652 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.66 | 58.0 | 4.45e-01 | 93.3% | 44.1% |
| 5083611 | 247.1.1.12 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_3 | 0.65 | 56.0 | 4.47e-01 | 93.3% | 46.8% |
| 5032150 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.65 | 57.0 | 4.36e-01 | 93.3% | 43.7% |
| 5012040 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.61 | 41.0 | 3.75e-01 | 87.3% | 51.8% |
| 2862889 | 247.1.1.30 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Anti-Pycsar_Apyc1 | 0.59 | 46.0 | 3.96e-01 | 87.3% | 52.1% |
| 3988451 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.59 | 44.0 | 3.95e-01 | 89.3% | 55.7% |
| 4339406 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.58 | 45.0 | 3.96e-01 | 94.7% | 55.5% |
| 3680806 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 52.0 | 4.70e-01 | 98.0% | 89.0% |
| 1563546 | 247.1.1.18 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_2 | 0.58 | 46.0 | 4.11e-01 | 90.0% | 60.1% |
| 3741831 | 247.1.1.13 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_4 | 0.57 | 52.0 | 3.89e-01 | 97.3% | 58.0% |
| 3180372 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.56 | 47.0 | 3.69e-01 | 91.3% | 66.6% |
| 5040041 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.56 | 41.0 | 3.42e-01 | 91.3% | 43.8% |
| 3559665 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.54 | 39.0 | 4.14e-01 | 91.3% | 83.8% |
| 3240166 | 7579.1.1.70 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1057 | 0.54 | 47.0 | 3.75e-01 | 98.0% | 75.8% |
| 3526787 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.54 | 39.0 | 4.14e-01 | 94.7% | 85.4% |
| 2719137 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.53 | 47.0 | 3.60e-01 | 98.0% | 77.2% |
| 2566019 | 247.1.1.18 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL,Lactamase_B_2 | 0.53 | 44.0 | 3.82e-01 | 89.3% | 58.1% |
| 5065974 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.52 | 44.0 | 3.48e-01 | 91.3% | 45.1% |
| 2812203 | 247.1.1.16 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_6 | 0.52 | 43.0 | 3.56e-01 | 87.3% | 74.0% |
| 3514938 | 213.1.1.6 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ | 0.51 | 37.0 | 4.07e-01 | 94.7% | 94.2% |
D7
medium
residues 735-860
Domain cluster:
rep: ATP-dependent_DNA_ligase__YP_009094561__Melbournevirus__1560514__D164-283
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01068.27 best | DNA_ligase_A_M | 67.9 | 1.40e-18 | 96.8% | 55.4% |
D8
medium
residues 1169-1390
Domain cluster:
rep: IMGVR_UViG_3300014914_000538-3300014914-Ga0164311_100002017__D34-263
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.63 | 34.0 | 3.82e-01 | 99.1% | 64.4% |
| 7emfR01 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.62 | 36.0 | 4.06e-01 | 99.5% | 72.6% |
| 3c0tA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.54 | 34.0 | 3.61e-01 | 99.1% | 68.2% |
| 1khiA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 15.0 | 2.58e-01 | 95.0% | 72.0% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 29.0 | 3.68e-01 | 95.5% | 94.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3886674 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.61 | 36.0 | 3.79e-01 | 100.0% | 61.5% |
| 3467163 | 868.1.1.5 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med18 | 0.61 | 38.0 | 3.90e-01 | 99.5% | 63.8% |
| 3702319 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.56 | 20.0 | 3.13e-01 | 72.1% | 80.0% |
| 4223484 | 225.1.1.6 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_2 | 0.55 | 23.0 | 2.72e-01 | 91.9% | 50.7% |
| 3804890 | 375.1.1.7 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C | 0.55 | 14.0 | 2.70e-01 | 96.4% | 78.0% |
D9
medium
residues 1391-1459