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IMGVR_UViG_3300021493_000001-3300021493-Ga0190306_100001854

Arc-Vir

IMGVR_UViG_3300021493_000001-3300021493-Ga0190306_100001854

Quality

96.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-42_62-178
PDB
D2 high residues 200-217_234-323
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.75 70.0 6.10e-01 100.0% 87.8%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.75 70.0 6.02e-01 100.0% 88.3%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.75 69.0 6.16e-01 100.0% 87.9%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.74 53.0 4.51e-01 88.9% 46.3%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.73 67.0 5.85e-01 100.0% 85.0%
3he1A00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.72 67.0 5.98e-01 100.0% 87.1%
2k4qA00 4.10.410.40 Few Secondary Structures › Irregular › Factor Xa Inhibitor › 0.69 57.0 5.06e-01 88.9% 83.3%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.69 52.0 4.42e-01 89.8% 49.4%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.68 55.0 5.82e-01 91.7% 96.8%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.68 58.0 5.52e-01 100.0% 79.8%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.66 39.0 4.30e-01 78.7% 73.3%
3q0bX00 2.30.280.10 Mainly Beta › Roll › PUA domain-like › SRA-YDG 0.65 59.0 5.33e-01 99.1% 88.5%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.63 39.0 4.28e-01 88.9% 76.7%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.63 34.0 3.94e-01 75.0% 72.2%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.63 48.0 4.96e-01 93.5% 86.9%
2gysA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 44.0 4.81e-01 93.5% 91.9%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 51.0 4.66e-01 100.0% 66.7%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 34.0 3.81e-01 77.8% 69.4%
3mwbB03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 36.0 3.85e-01 80.6% 67.4%
4ci2B02 2.30.130.40 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like 0.60 45.0 4.35e-01 90.7% 68.8%
1rfeA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 54.0 5.06e-01 100.0% 80.1%
2nyiA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.60 35.0 4.02e-01 77.8% 77.8%
3tupA02 3.30.70.380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain 0.58 39.0 4.11e-01 79.6% 77.1%
2v9kA04 3.30.70.3190 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 39.0 3.89e-01 75.9% 67.9%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.57 36.0 3.80e-01 83.3% 71.3%
1blxA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 41.0 4.39e-01 90.7% 88.0%
2oo4A02 3.30.70.3310 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 43.0 4.30e-01 78.7% 77.5%
4za1C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 32.0 3.48e-01 72.2% 66.3%
5w7tA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 36.0 3.84e-01 83.3% 75.3%
4acvA00 3.30.2000.30 Alpha Beta › 2-Layer Sandwich › STM4215-like › 0.54 46.0 4.50e-01 94.4% 89.1%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 37.0 3.73e-01 81.5% 70.4%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 32.0 3.39e-01 76.9% 63.9%
4bhqA00 3.30.70.2830 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 45.0 4.54e-01 90.7% 89.9%
5xoyB02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 36.0 3.68e-01 80.6% 70.1%
5is2A01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.53 33.0 3.58e-01 83.3% 72.5%
4hudA01 3.30.2000.40 Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser 0.53 47.0 3.84e-01 100.0% 79.0%
3i4hX02 3.30.70.1900 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 38.0 3.85e-01 85.2% 76.9%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.52 47.0 3.27e-01 100.0% 48.3%
1k8wA01 3.30.2350.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase 0.52 41.0 3.26e-01 87.0% 53.5%
3gnlA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 33.0 2.88e-01 86.1% 41.8%
2ivfC00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 46.0 3.69e-01 100.0% 83.6%
1dq3A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 38.0 4.12e-01 99.1% 100.0%
1lfwA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 37.0 3.75e-01 76.9% 80.2%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5078836 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.96 91.0 9.08e-01 100.0% 95.5%
4954552 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.85 79.0 6.77e-01 98.1% 92.5%
5080512 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.82 76.0 5.26e-01 100.0% 39.7%
5079559 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 69.0 6.75e-01 91.7% 95.7%
1560729 1.1.5.35 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF 0.77 63.0 5.68e-01 97.2% 64.6%
3264744 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.76 70.0 5.90e-01 100.0% 80.0%
80 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.76 70.0 6.06e-01 100.0% 88.1%
4878666 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.76 71.0 6.44e-01 100.0% 87.0%
3969384 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 70.0 6.05e-01 100.0% 83.1%
3265120 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 69.0 5.83e-01 100.0% 80.0%
4982153 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.75 69.0 5.09e-01 100.0% 48.1%
3977123 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.75 69.0 6.02e-01 100.0% 80.6%
4009489 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.75 69.0 6.08e-01 100.0% 85.2%
1124583 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.75 69.0 6.16e-01 100.0% 87.9%
4957560 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.75 69.0 6.41e-01 98.1% 93.8%
5083300 1.1.13.6 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.74 68.0 6.16e-01 100.0% 93.8%
4988100 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 68.0 6.51e-01 100.0% 97.6%
4344991 1.1.5.35 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF 0.74 62.0 5.79e-01 94.4% 73.8%
1563850 1.1.5.23 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.73 67.0 5.85e-01 100.0% 85.0%
184486 1.1.13.26 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st 0.72 50.0 5.62e-01 88.0% 93.8%
4954551 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.72 67.0 6.21e-01 100.0% 88.1%
3305653 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.69 40.0 4.85e-01 83.3% 88.6%
3655967 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 43.0 4.55e-01 92.6% 70.5%
4031285 1.1.13.64 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal 0.69 53.0 5.78e-01 89.8% 97.8%
2475124 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 55.0 5.92e-01 87.0% 97.9%
3816023 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.68 43.0 4.85e-01 89.8% 83.7%
3302927 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.68 62.0 4.69e-01 100.0% 58.4%
3372798 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.68 43.0 4.75e-01 92.6% 80.0%
3321868 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.68 62.0 4.79e-01 100.0% 58.7%
3807253 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.68 42.0 4.86e-01 89.8% 85.0%
3655963 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 37.0 4.49e-01 76.9% 82.9%
3435075 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.67 61.0 4.86e-01 100.0% 68.4%
3836146 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.67 61.0 5.49e-01 100.0% 91.7%
3452017 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.66 42.0 4.84e-01 91.7% 87.5%
3941539 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.66 55.0 5.65e-01 89.8% 100.0%
3365684 306.6.1.0 a+b two layers › Glucose permease domain IIB-like › PH0987 N-terminal domain-like › PH0987 N-terminal domain-like 0.66 44.0 4.61e-01 93.5% 74.0%
4023048 1.1.9.4 beta barrels › cradle loop barrel › RIFT-related › PUA domain › SAD_SRA 0.65 60.0 4.84e-01 100.0% 73.0%
3639132 1.1.9.0 beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.65 59.0 5.13e-01 99.1% 87.3%
5017055 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.65 35.0 4.10e-01 75.0% 74.7%
4667615 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 47.0 4.48e-01 94.4% 64.8%
4954911 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.65 37.0 4.14e-01 79.6% 71.8%
3970195 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.65 40.0 4.25e-01 78.7% 70.5%
3671608 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.64 44.0 4.40e-01 93.5% 68.2%
4504111 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.64 37.0 4.18e-01 77.8% 75.0%
3367471 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.64 35.0 4.21e-01 84.3% 81.4%
3659065 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.64 47.0 4.87e-01 93.5% 83.0%
3825541 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.64 45.0 4.55e-01 93.5% 72.7%
4927585 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.64 37.0 4.22e-01 75.0% 77.5%
3364258 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.63 41.0 4.47e-01 93.5% 79.5%
3284562 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.63 38.0 4.27e-01 77.8% 76.5%
3451456 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.62 42.0 4.52e-01 92.6% 80.0%
4596185 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.61 36.0 4.17e-01 77.8% 80.8%
3348806 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.61 35.0 4.15e-01 78.7% 82.7%
3383879 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.60 35.0 4.06e-01 75.9% 81.3%
3508173 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.60 42.0 4.48e-01 88.9% 82.1%
5040672 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.60 37.0 3.97e-01 77.8% 72.2%
5005586 304.8.1.9 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.60 36.0 4.06e-01 83.3% 76.5%
3307398 304.8.1.45 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.60 43.0 4.29e-01 92.6% 72.7%
4290185 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.60 41.0 3.31e-01 100.0% 36.8%
4116290 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.60 37.0 3.84e-01 82.4% 66.0%
4074612 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.59 33.0 3.56e-01 75.0% 61.1%
4020643 304.8.1.1 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › Thr_dehydrat_C 0.59 34.0 3.63e-01 83.3% 64.2%
4032433 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.58 35.0 3.75e-01 77.8% 68.4%
3873184 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 37.0 4.21e-01 89.8% 87.5%
4061575 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.57 33.0 3.59e-01 75.9% 67.8%
3329883 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 42.0 4.17e-01 88.9% 75.5%
4065918 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 35.0 3.79e-01 84.3% 74.4%
4116143 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 36.0 3.79e-01 83.3% 72.6%
3734783 2003.1.9.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF 0.55 47.0 3.16e-01 90.7% 88.8%
4064154 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 36.0 3.73e-01 86.1% 72.0%
3220701 206.1.1.55 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL 0.54 43.0 3.02e-01 99.1% 26.4%
4105300 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.54 34.0 3.65e-01 85.2% 72.6%
4994966 314.1.1.6 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB 0.51 45.0 3.59e-01 96.3% 82.8%
4219826 304.102.1.3 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 0.51 39.0 3.03e-01 81.5% 56.9%