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IMGVR_UViG_3300021493_000008-3300021493-Ga0190306_10003212
Arc-VirIMGVR_UViG_3300021493_000008-3300021493-Ga0190306_10003212
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-115
Domain cluster:
rep: BML_coassembly_scaffold_37_prodigal-single.1__X__X__00079__D57-167
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4f55A01 | 1.10.10.2520 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Cell wall hydrolase SleB, domain 1 | 0.86 | 58.0 | 6.89e-01 | 97.4% | 97.5% |
| 1q5nA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.71 | 42.0 | 4.86e-01 | 97.4% | 81.5% |
| 6bldA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.67 | 53.0 | 3.60e-01 | 84.2% | 64.0% |
| 2iw3A02 | 1.20.1390.20 | Mainly Alpha › Up-down Bundle › PWI domain › | 0.61 | 38.0 | 4.26e-01 | 96.5% | 80.0% |
| 1rm6D04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.60 | 47.0 | 3.71e-01 | 83.3% | 87.7% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.57 | 36.0 | 3.88e-01 | 98.2% | 72.7% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.56 | 36.0 | 3.45e-01 | 99.1% | 55.6% |
| 2nq2A00 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.55 | 44.0 | 3.25e-01 | 86.0% | 69.8% |
| 3f7cA00 | 1.20.1590.10 | Mainly Alpha › Up-down Bundle › YP_001051499.1 fold like › YP_001051499.1 domain like | 0.54 | 38.0 | 3.24e-01 | 73.7% | 84.4% |
| 4akgA13 | 1.10.8.740 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 34.0 | 3.85e-01 | 86.8% | 87.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4929293 | 4953.1.1.2 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C | 0.71 | 43.0 | 4.92e-01 | 97.4% | 81.2% |
| 5011426 | 4953.1.1.2 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C | 0.69 | 43.0 | 4.84e-01 | 97.4% | 82.4% |
| 3282688 | 191.1.1.0 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain | 0.58 | 33.0 | 3.22e-01 | 88.6% | 47.7% |
| 5025739 | 4953.1.1.2 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ADSL_C | 0.57 | 37.0 | 4.28e-01 | 79.8% | 98.7% |
| 4134497 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.55 | 36.0 | 2.87e-01 | 89.5% | 31.7% |
| 3944017 | 4198.1.1.1 ↗ | alpha arrays › TerB-like › TerB-like › TerB-like › TerB | 0.55 | 38.0 | 3.74e-01 | 70.2% | 71.5% |
| 3625380 | 610.2.1.1 ↗ | alpha arrays › ERP29 C domain-like › Helical domain of Sec23/24 › Helical domain of Sec23/24 › Sec23_helical | 0.55 | 36.0 | 3.53e-01 | 84.2% | 61.0% |
| 3183113 | 101.1.11.111 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF3818 | 0.53 | 42.0 | 4.00e-01 | 87.7% | 71.9% |
| 3925672 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 31.0 | 3.48e-01 | 85.1% | 77.5% |
| 3251428 | 3919.1.1.4 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMMD1_N | 0.52 | 39.0 | 4.04e-01 | 81.6% | 86.4% |
| 3936049 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.51 | 37.0 | 2.90e-01 | 74.6% | 83.3% |
| 3781737 | 192.4.1.23 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › DUF3818 | 0.51 | 40.0 | 3.81e-01 | 89.5% | 71.9% |
| 3258043 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.50 | 39.0 | 3.96e-01 | 86.8% | 87.3% |