←Back to structures

IMGVR_UViG_3300021493_000022-3300021493-Ga0190306_10029932

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300021493_000022-3300021493-Ga0190306_10029932 ↗
Kingdom:: archaea

Quality

94.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-56_112-186

PDB

Domain cluster: rep: NC_042116.1__YP_009623969.1__FDJ41_gp359__00359__D1-48_151-193_267-333

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3226473	872.1.1.9 ↗	a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › PF29479	0.65	36.0	4.16e-01	100.0%	74.7%
3213896	246.1.1.1 ↗	a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase	0.51	42.0	3.22e-01	91.6%	100.0%

D2 medium residues 57-111

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
8igrI01	2.40.270.10	Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6	0.68	48.0	3.36e-01	78.2%	23.3%
4ihqA02	1.10.390.40	Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 ›	0.65	56.0	5.37e-01	100.0%	96.9%
1akhB00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.54	43.0	3.96e-01	100.0%	66.7%
1x2nA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.51	37.0	3.64e-01	98.2%	76.7%
1p9lA02	3.30.360.10	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2	0.50	40.0	3.22e-01	87.3%	57.0%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4968425	4009.1.1.1 ↗	alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom	0.76	64.0	5.89e-01	92.7%	72.9%
5082367	4009.1.1.0 ↗	alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins	0.74	57.0	5.47e-01	85.5%	73.8%
4931700	4009.1.1.0 ↗	alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins	0.72	57.0	5.35e-01	89.1%	72.9%
5034808	4009.1.1.1 ↗	alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom	0.71	57.0	5.36e-01	90.9%	72.9%
3311071	5063.1.1.13 ↗	alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Myb_DNA-bind_3	0.65	53.0	5.31e-01	92.7%	98.2%
3185507	632.7.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain	0.61	45.0	4.01e-01	80.0%	67.5%
3418415	108.1.1.23 ↗	alpha arrays › EF-hand › EF-hand-related › EF-hand › RST	0.59	46.0	4.49e-01	98.2%	80.0%
7636	4053.1.1.1 ↗	a+b complex topology › Insertion domain in replication terminator protein (Tus) › Insertion domain in replication terminator protein (Tus) › Insertion domain in replication terminator protein (Tus) › Ter	0.58	40.0	3.91e-01	72.7%	64.5%
4950999	601.1.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin	0.55	38.0	3.17e-01	74.5%	41.8%