←Back to structures
IMGVR_UViG_3300021493_000027-3300021493-Ga0190306_10008441
Arc-VirIMGVR_UViG_3300021493_000027-3300021493-Ga0190306_10008441
Identity
- Kingdom:
- archaea
Quality
68.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 67-151
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2y4tA02 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.62 | 35.0 | 4.38e-01 | 78.8% | 92.3% |
| 3v2lA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.60 | 48.0 | 4.27e-01 | 90.6% | 61.7% |
| 3agkA01 | 3.30.960.10 | Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 | 0.57 | 45.0 | 3.87e-01 | 83.5% | 60.2% |
| 1chkA01 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.56 | 48.0 | 4.08e-01 | 95.3% | 97.2% |
| 4l9aA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 44.0 | 3.18e-01 | 95.3% | 87.2% |
| 4wzsB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.50 | 34.0 | 3.16e-01 | 70.6% | 75.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5001587 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.68 | 55.0 | 3.52e-01 | 87.1% | 26.1% |
| 4994063 | 832.1.1.1 ↗ | a+b three layers › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 › eRF1_1 | 0.66 | 46.0 | 4.46e-01 | 96.5% | 65.3% |
| 5007085 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.63 | 52.0 | 3.37e-01 | 89.4% | 36.5% |
| 4929738 | 6049.1.1.0 ↗ | alpha bundles › PH0832-like › PH0832-like › PH0832-like | 0.58 | 42.0 | 4.42e-01 | 76.5% | 100.0% |
| 4187867 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.57 | 45.0 | 3.07e-01 | 85.9% | 40.6% |
| 3635138 | 2003.1.7.11 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › AcetylCoA_hyd_C | 0.57 | 49.0 | 3.39e-01 | 94.1% | 50.0% |
| 3570182 | 129.1.1.27 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › Speriolin_C | 0.57 | 42.0 | 4.14e-01 | 81.2% | 87.4% |
| 4303922 | 102.1.1.4 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › 5_3_exonuc | 0.56 | 40.0 | 3.71e-01 | 77.6% | 64.3% |
| 3282741 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.51 | 42.0 | 3.49e-01 | 95.3% | 97.1% |
| 1560741 | 3517.1.1.2 ↗ | a+b complex topology › Polymerase acidic protein › Polymerase acidic protein › Polymerase acidic protein › Bunya_RdRp | 0.51 | 38.0 | 2.46e-01 | 81.2% | 91.8% |
D2
medium
residues 4-62