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IMGVR_UViG_3300021495_000001-3300021495-Ga0190352_1000003126
Arc-VirIMGVR_UViG_3300021495_000001-3300021495-Ga0190352_1000003126
Identity
- Kingdom:
- archaea
Quality
94.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-79
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1luiA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 48.0 | 4.27e-01 | 100.0% | 53.7% |
| 1llnA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.62 | 47.0 | 3.61e-01 | 82.4% | 100.0% |
| 2pmeA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.61 | 54.0 | 3.57e-01 | 100.0% | 73.7% |
| 1v6zA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.61 | 46.0 | 4.88e-01 | 100.0% | 93.8% |
| 5dynA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 50.0 | 4.41e-01 | 100.0% | 62.3% |
| 2k6hA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.59 | 45.0 | 3.47e-01 | 82.4% | 95.3% |
| 1y8cA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.58 | 32.0 | 3.53e-01 | 77.0% | 65.0% |
| 3bfmA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 48.0 | 3.74e-01 | 97.3% | 84.4% |
| 2fjrA02 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.55 | 50.0 | 4.31e-01 | 100.0% | 89.4% |
| 4on1A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 46.0 | 3.81e-01 | 94.6% | 58.3% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.55 | 40.0 | 3.29e-01 | 78.4% | 57.9% |
| 4btfA03 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 44.0 | 3.92e-01 | 91.9% | 78.6% |
| 3l0qA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 45.0 | 2.87e-01 | 93.2% | 18.7% |
| 2ykfA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 44.0 | 3.57e-01 | 93.2% | 45.9% |
| 2q07A03 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.54 | 43.0 | 4.47e-01 | 98.6% | 98.5% |
| 3p24A01 | 2.40.128.470 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 46.0 | 3.71e-01 | 98.6% | 53.6% |
| 3qdkA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 36.0 | 2.50e-01 | 98.6% | 19.2% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.52 | 35.0 | 2.97e-01 | 70.3% | 78.9% |
| 4lqeA00 | 3.40.1350.140 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › MepB-like | 0.51 | 44.0 | 3.61e-01 | 100.0% | 69.8% |
| 2je8A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 35.0 | 3.08e-01 | 70.3% | 63.7% |
| 3g98A00 | 3.10.310.40 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › | 0.50 | 43.0 | 3.85e-01 | 100.0% | 73.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2512672 | 3856.1.2.1 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta | 0.84 | 71.0 | 7.51e-01 | 95.9% | 100.0% |
| 3539914 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.75 | 50.0 | 3.69e-01 | 100.0% | 27.6% |
| 5051461 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 43.0 | 3.26e-01 | 93.2% | 28.8% |
| 4150492 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 51.0 | 3.56e-01 | 100.0% | 26.7% |
| 3815770 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 51.0 | 3.91e-01 | 100.0% | 39.4% |
| 3741114 | 223.2.1.29 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 | 0.62 | 43.0 | 3.36e-01 | 93.2% | 33.1% |
| 4013103 | 2008.1.1.99 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 | 0.61 | 54.0 | 3.81e-01 | 100.0% | 46.0% |
| 5049631 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.60 | 46.0 | 3.73e-01 | 93.2% | 43.6% |
| 4930189 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.60 | 43.0 | 4.65e-01 | 100.0% | 93.3% |
| 3734714 | 2008.1.1.143 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 | 0.60 | 55.0 | 3.69e-01 | 100.0% | 34.2% |
| 3728191 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 54.0 | 4.04e-01 | 100.0% | 48.9% |
| 3204747 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 54.0 | 3.59e-01 | 100.0% | 30.8% |
| 3697816 | 2008.1.1.99 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 | 0.59 | 54.0 | 3.99e-01 | 100.0% | 44.0% |
| 3725833 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 53.0 | 3.49e-01 | 100.0% | 34.9% |
| 3930769 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.55 | 48.0 | 3.39e-01 | 100.0% | 37.1% |
| 2323844 | 11.45.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › IBP (ice-binding protein) RIII_3 domain › IBP (ice-binding protein) RIII_3 domain | 0.54 | 43.0 | 3.27e-01 | 89.2% | 93.3% |
| 4010890 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 45.0 | 3.62e-01 | 91.9% | 51.7% |
| 3212579 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.54 | 46.0 | 3.15e-01 | 100.0% | 46.0% |
| 4974759 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.53 | 48.0 | 3.13e-01 | 100.0% | 30.3% |
| 4964662 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.53 | 45.0 | 3.82e-01 | 93.2% | 63.3% |
| 3186526 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.53 | 48.0 | 3.17e-01 | 100.0% | 31.7% |
| 3295967 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.52 | 45.0 | 3.60e-01 | 98.6% | 52.9% |
| 3270703 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.51 | 45.0 | 3.20e-01 | 100.0% | 37.3% |
| 4574830 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.51 | 44.0 | 3.84e-01 | 100.0% | 65.8% |
| 3373176 | 3459.1.1.3 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › DUF868 | 0.51 | 41.0 | 3.38e-01 | 91.9% | 47.5% |
| 4422472 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 44.0 | 3.84e-01 | 100.0% | 63.9% |
| 3449580 | 7502.1.1.2 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Brix | 0.51 | 45.0 | 3.33e-01 | 100.0% | 40.5% |
| 5048829 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 45.0 | 3.87e-01 | 100.0% | 64.2% |
| 4498250 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.51 | 44.0 | 3.92e-01 | 100.0% | 74.5% |
D2
high
residues 372-421
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.72 | 58.0 | 4.46e-01 | 100.0% | 39.5% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.71 | 52.0 | 4.40e-01 | 80.0% | 52.3% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.70 | 58.0 | 4.74e-01 | 100.0% | 49.5% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.69 | 61.0 | 4.75e-01 | 100.0% | 47.2% |
| 3venA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 51.0 | 3.33e-01 | 84.0% | 20.6% |
| 2ci8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.67 | 57.0 | 5.56e-01 | 100.0% | 87.5% |
| 2izvA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 54.0 | 3.86e-01 | 100.0% | 29.4% |
| 3a8kA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.66 | 49.0 | 4.14e-01 | 82.0% | 54.5% |
| 1v5vA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.65 | 48.0 | 4.03e-01 | 82.0% | 51.1% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.65 | 55.0 | 4.13e-01 | 100.0% | 44.9% |
| 3u50C01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 54.0 | 4.08e-01 | 96.0% | 93.7% |
| 6u10A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 49.0 | 3.09e-01 | 88.0% | 45.4% |
| 1xezA01 | 3.30.110.130 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hemolytic toxin, N-terminal domain | 0.62 | 53.0 | 4.63e-01 | 100.0% | 90.1% |
| 3bk3C00 | 6.20.200.20 | Special › Other non-globular › Defensin A-like › | 0.62 | 41.0 | 3.69e-01 | 72.0% | 50.7% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.62 | 52.0 | 4.53e-01 | 98.0% | 92.4% |
| 2flhB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.62 | 53.0 | 3.79e-01 | 98.0% | 41.2% |
| 2az4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.62 | 48.0 | 3.02e-01 | 88.0% | 54.6% |
| 1nrkA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.61 | 44.0 | 3.81e-01 | 80.0% | 50.6% |
| 2vneA01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 53.0 | 3.68e-01 | 98.0% | 36.2% |
| 7pthC01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.61 | 51.0 | 3.01e-01 | 100.0% | 76.0% |
| 6i8xA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 43.0 | 3.17e-01 | 80.0% | 28.2% |
| 3q0xA01 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.59 | 53.0 | 3.68e-01 | 100.0% | 78.7% |
| 6wo0A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.58 | 42.0 | 2.92e-01 | 86.0% | 54.5% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.57 | 48.0 | 4.03e-01 | 98.0% | 53.8% |
| 4xukA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.57 | 46.0 | 2.99e-01 | 100.0% | 25.4% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 43.0 | 2.79e-01 | 86.0% | 49.4% |
| 6n36A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 42.0 | 2.75e-01 | 88.0% | 46.0% |
| 4ms4A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 49.0 | 3.31e-01 | 100.0% | 29.8% |
| 1p9eA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 45.0 | 2.91e-01 | 100.0% | 24.8% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.55 | 46.0 | 4.32e-01 | 100.0% | 93.9% |
| 4zo2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 45.0 | 2.92e-01 | 100.0% | 24.9% |
| 1lkeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 3.40e-01 | 100.0% | 42.0% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.55 | 44.0 | 3.82e-01 | 100.0% | 86.0% |
| 3vtiA06 | 3.30.420.560 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.54 | 40.0 | 3.28e-01 | 84.0% | 47.6% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.54 | 43.0 | 3.46e-01 | 100.0% | 54.1% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 45.0 | 3.11e-01 | 98.0% | 85.6% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.67e-01 | 98.0% | 20.4% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 38.0 | 3.22e-01 | 90.0% | 63.2% |
| 1uypA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 42.0 | 2.72e-01 | 100.0% | 96.8% |
| 4fbcA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.51 | 40.0 | 2.96e-01 | 100.0% | 45.4% |
| 6j4nC01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 38.0 | 2.33e-01 | 100.0% | 12.0% |
| 1v4nA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.50 | 34.0 | 2.25e-01 | 74.0% | 19.5% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3938083 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.73 | 61.0 | 4.97e-01 | 100.0% | 49.5% |
| 3560459 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.72 | 50.0 | 5.27e-01 | 74.0% | 91.1% |
| 3579037 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.72 | 61.0 | 4.74e-01 | 100.0% | 44.8% |
| 3937854 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.71 | 59.0 | 4.77e-01 | 100.0% | 47.0% |
| 3862816 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.71 | 51.0 | 4.68e-01 | 76.0% | 62.5% |
| 3753991 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.71 | 50.0 | 5.27e-01 | 76.0% | 88.9% |
| 3941356 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.70 | 59.0 | 4.44e-01 | 100.0% | 39.2% |
| 3583928 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.70 | 59.0 | 4.62e-01 | 100.0% | 44.8% |
| 3617276 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.69 | 58.0 | 4.38e-01 | 100.0% | 39.2% |
| 3218472 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.69 | 60.0 | 4.45e-01 | 100.0% | 39.2% |
| 3585382 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.69 | 54.0 | 3.11e-01 | 90.0% | 32.4% |
| 5074348 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.68 | 60.0 | 4.36e-01 | 100.0% | 36.4% |
| 3625308 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.68 | 59.0 | 4.40e-01 | 100.0% | 39.2% |
| 3581699 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.68 | 58.0 | 4.38e-01 | 100.0% | 40.9% |
| 3619626 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.68 | 56.0 | 4.60e-01 | 100.0% | 49.5% |
| 3479718 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.68 | 58.0 | 4.41e-01 | 100.0% | 40.8% |
| 3512824 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.68 | 58.0 | 4.59e-01 | 100.0% | 46.7% |
| 3240191 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.67 | 58.0 | 4.34e-01 | 100.0% | 40.8% |
| 3892257 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.66 | 57.0 | 4.27e-01 | 100.0% | 39.2% |
| 4052309 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.66 | 57.0 | 4.42e-01 | 100.0% | 78.3% |
| 4385298 | 3421.1.1.1 ↗ | a+b complex topology › Yos9 dimerization domain › Yos9 dimerization domain › Yos9 dimerization domain › Yos9_DD | 0.66 | 55.0 | 4.24e-01 | 100.0% | 68.8% |
| 3392692 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.66 | 47.0 | 4.44e-01 | 76.0% | 63.3% |
| 3521647 | 391.1.2.1 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC | 0.65 | 46.0 | 4.20e-01 | 74.0% | 60.0% |
| 4977613 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.65 | 56.0 | 4.11e-01 | 100.0% | 36.4% |
| 3876068 | 391.1.1.9 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › EGF1_RECK | 0.63 | 43.0 | 4.37e-01 | 74.0% | 88.0% |
| 4033930 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.62 | 52.0 | 4.47e-01 | 100.0% | 61.2% |
| 3344476 | 223.2.1.33 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 | 0.62 | 46.0 | 3.56e-01 | 88.0% | 37.8% |
| 5061935 | 7575.1.1.4 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C11 | 0.61 | 52.0 | 3.14e-01 | 100.0% | 15.8% |
| 4002382 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.60 | 41.0 | 2.56e-01 | 70.0% | 88.8% |
| 3238323 | 3535.1.1.0 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 | 0.60 | 49.0 | 3.86e-01 | 98.0% | 51.7% |
| 3993319 | 913.1.1.0 ↗ | few secondary structure elements › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) › Hormone receptor domain (HRM, Pfam 02793) | 0.59 | 44.0 | 4.27e-01 | 90.0% | 73.3% |
| 5074458 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.58 | 46.0 | 3.22e-01 | 90.0% | 68.8% |
| 3589823 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 44.0 | 4.09e-01 | 98.0% | 64.6% |
| 4978913 | 1.1.9.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › UPF0113 | 0.56 | 46.0 | 4.24e-01 | 100.0% | 91.4% |
| 4149342 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.55 | 45.0 | 4.17e-01 | 100.0% | 95.7% |
| 3792405 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 40.0 | 2.35e-01 | 82.0% | 16.6% |
| 4970227 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.54 | 40.0 | 2.73e-01 | 86.0% | 82.6% |
| 4981834 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.54 | 39.0 | 2.41e-01 | 100.0% | 13.3% |
| 4878386 | 247.1.1.28 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › RMMBL | 0.53 | 39.0 | 2.76e-01 | 100.0% | 24.1% |
| 4312009 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.53 | 42.0 | 3.96e-01 | 100.0% | 95.7% |
| 4558844 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.53 | 42.0 | 3.99e-01 | 100.0% | 93.8% |
| 5011405 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.53 | 44.0 | 4.06e-01 | 100.0% | 85.7% |
| 3502916 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 44.0 | 3.15e-01 | 100.0% | 94.8% |
| 3265052 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 42.0 | 2.85e-01 | 100.0% | 46.8% |
| 3604653 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.51 | 42.0 | 2.57e-01 | 100.0% | 37.4% |
| 2727472 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.51 | 38.0 | 2.29e-01 | 100.0% | 11.3% |
| 5017260 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.51 | 41.0 | 3.16e-01 | 98.0% | 95.6% |
| 3603181 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.50 | 40.0 | 3.90e-01 | 98.0% | 100.0% |
D3
medium
residues 121-266
Domain cluster:
rep: IMGVR_UViG_2660238813_000001-2660238813-2663687523__D440-569
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xqhA01 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.81 | 64.0 | 6.67e-01 | 95.9% | 87.4% |
| 3s6lD00 | 2.150.10.10 | Mainly Beta › 2 Solenoid › Alkaline Protease, subunit P, domain 1 › Serralysin-like metalloprotease, C-terminal | 0.79 | 62.0 | 6.06e-01 | 100.0% | 74.7% |
| 7d73E02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.76 | 58.0 | 6.00e-01 | 88.4% | 84.7% |
| 4m9cA02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.70 | 53.0 | 5.96e-01 | 80.1% | 100.0% |
| 1xatA00 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.60 | 48.0 | 4.24e-01 | 84.2% | 77.4% |
| 5l6vE02 | 2.160.10.10 | Mainly Beta › 3 Solenoid › UDP N-Acetylglucosamine Acyltransferase; domain 1 › Hexapeptide repeat proteins | 0.59 | 48.0 | 5.02e-01 | 84.2% | 96.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4593120 | 208.2.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › YadA_head | 0.73 | 64.0 | 5.99e-01 | 100.0% | 76.0% |
| 3622728 | 208.1.1.17 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C | 0.71 | 59.0 | 6.05e-01 | 91.8% | 91.4% |
| 3716111 | 208.1.1.17 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C | 0.70 | 62.0 | 5.99e-01 | 94.5% | 92.5% |
| 3982199 | 208.1.1.8 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › B_solenoid_ydck | 0.69 | 59.0 | 6.03e-01 | 89.7% | 100.0% |
| None | — | 0.68 | 60.0 | 5.87e-01 | 94.5% | 88.4% | |
| 5000450 | 208.1.1.17 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › GMPPB_C | 0.67 | 62.0 | 5.75e-01 | 100.0% | 91.9% |
| 3837584 | 208.1.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Acetyltransf_11 | 0.66 | 61.0 | 4.74e-01 | 100.0% | 56.5% |
| 3182022 | 208.1.1.2 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep,Mac | 0.61 | 54.0 | 4.87e-01 | 97.3% | 87.2% |