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IMGVR_UViG_3300021495_000001-3300021495-Ga0190352_100000359

Arc-Vir

IMGVR_UViG_3300021495_000001-3300021495-Ga0190352_100000359

Identity

Kingdom:
archaea

Quality

75.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-76
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4g10A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 47.0 3.80e-01 81.2% 72.8%
4wr4A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.62 46.0 4.05e-01 81.2% 85.7%
2f48A03 1.10.10.480 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 0.61 45.0 4.40e-01 89.9% 72.0%
2ooeA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 46.0 3.45e-01 85.5% 46.3%
7jt8I01 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.59 47.0 3.38e-01 91.3% 82.7%
4cemA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.59 42.0 2.78e-01 75.4% 51.5%
2m35A00 1.10.60.50 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › 0.58 35.0 3.89e-01 100.0% 78.8%
8b70A01 1.20.1740.10 Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I 0.57 44.0 2.76e-01 87.0% 81.3%
3d5lA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 32.0 3.59e-01 76.8% 73.1%
3pjaJ01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.56 41.0 3.44e-01 81.2% 75.6%
1j1jA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.55 42.0 3.49e-01 84.1% 70.5%
1jvmB00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 42.0 3.78e-01 85.5% 64.0%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 40.0 3.88e-01 82.6% 96.3%
3p5pA02 1.50.10.160 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.53 45.0 3.33e-01 98.6% 73.3%
3ih6E00 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.53 40.0 3.12e-01 88.4% 94.0%
4ielA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.52 41.0 3.53e-01 87.0% 75.9%
1wlmA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.51 41.0 3.66e-01 89.9% 82.5%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.51 38.0 3.74e-01 82.6% 96.2%
1z3iX03 1.20.120.850 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SWI2/SNF2 ATPases, N-terminal domain 0.50 39.0 3.56e-01 88.4% 71.7%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4033673 829.1.1.2 ↗ a+b duplicates or obligate multimers › NinB › NinB › NinB › HNHc_6 0.74 60.0 5.59e-01 88.4% 100.0%
3269293 2004.1.1.366 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N 0.68 60.0 4.19e-01 98.6% 38.2%
3388298 2003.1.5.62 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Eco57I 0.65 41.0 2.57e-01 92.8% 11.7%
4975066 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.62 48.0 3.45e-01 84.1% 85.9%
4946825 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.62 49.0 3.51e-01 88.4% 36.4%
3411080 603.1.1.101 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_6 0.61 49.0 3.34e-01 95.7% 74.4%
3194866 3745.1.1.1 ↗ alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex 0.60 43.0 2.74e-01 78.3% 79.0%
5041724 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.59 48.0 3.62e-01 88.4% 45.5%
3330919 109.4.1.1560 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, E_motif 0.59 44.0 2.69e-01 81.2% 15.5%
3595737 109.4.1.218 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP 0.58 42.0 3.38e-01 79.7% 58.0%
3302202 3745.1.1.1 ↗ alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex 0.58 44.0 2.87e-01 84.1% 80.3%
3444721 603.1.1.6 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin_2 0.57 40.0 2.97e-01 75.4% 96.4%
3168054 109.4.1.252 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HSM3_C,HSM3_N 0.56 41.0 2.52e-01 79.7% 18.3%
5057456 7512.1.1.31 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_4_4 0.56 48.0 3.54e-01 98.6% 60.5%
5029761 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.55 46.0 3.32e-01 94.2% 48.1%
3930763 144.1.1.1 ↗ alpha arrays › PGBD-like › PGBD-like › PGBD-like › PG_binding_1 0.55 45.0 4.42e-01 100.0% 84.0%
3995800 193.1.1.7 ↗ alpha bundles › CH domain-like › Calponin-homology domain-like › Calponin-homology domain-like › IFT81_CH 0.54 48.0 3.86e-01 100.0% 56.3%
5032274 2006.1.4.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like 0.54 41.0 3.53e-01 85.5% 97.5%
3603485 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 40.0 2.43e-01 87.0% 13.7%
3588529 162.1.1.1 ↗ alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD 0.51 41.0 3.69e-01 89.9% 87.0%
3800950 188.1.1.0 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain 0.51 38.0 2.72e-01 81.2% 55.5%
4499395 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 38.0 3.74e-01 82.6% 100.0%
D2 high residues 128-191
PDB
Domain cluster: representative
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3majA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 69.0 7.11e-01 100.0% 88.3%
2zo4A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 60.0 6.70e-01 82.8% 98.0%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.82 62.0 5.54e-01 87.5% 57.8%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 67.0 5.12e-01 98.4% 40.6%
2g9wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 6.93e-01 100.0% 89.6%
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 6.97e-01 100.0% 90.8%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 73.0 6.67e-01 100.0% 79.8%
5c17A00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.80 68.0 4.69e-01 100.0% 28.6%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 66.0 6.25e-01 100.0% 76.3%
1yg2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 6.49e-01 100.0% 77.2%
4bgdA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 6.25e-01 98.4% 95.6%
3mq0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 6.12e-01 100.0% 74.0%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 6.43e-01 100.0% 83.1%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 6.44e-01 100.0% 84.3%
1j75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 63.0 6.61e-01 100.0% 98.2%
4jqfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 70.0 6.72e-01 100.0% 94.5%
2v7fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 70.0 5.39e-01 100.0% 48.9%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.77 69.0 4.72e-01 100.0% 28.8%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 69.0 6.28e-01 100.0% 74.4%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 6.24e-01 100.0% 83.3%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 6.88e-01 100.0% 98.4%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 67.0 5.92e-01 100.0% 69.6%
2m45A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 67.0 6.02e-01 100.0% 74.7%
4z4qA04 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.74 50.0 4.49e-01 75.0% 50.6%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 66.0 6.50e-01 100.0% 94.2%
6vydA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.73 57.0 3.67e-01 84.4% 45.6%
1rykA00 1.10.1470.10 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ 0.73 54.0 5.28e-01 89.1% 72.5%
3e1sA01 1.10.10.2220 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.73 64.0 5.62e-01 98.4% 76.8%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.94e-01 100.0% 83.6%
2fxaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 65.0 4.83e-01 100.0% 44.2%
8h6qD01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.72 56.0 3.61e-01 85.9% 94.5%
7y9hB01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.72 58.0 3.68e-01 89.1% 42.1%
3qyfA03 1.10.10.1690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Uncharacterised CRISPR-associated protein family, UPF0236 0.72 51.0 5.21e-01 100.0% 78.7%
1mw9X02 1.10.460.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 0.72 61.0 4.61e-01 100.0% 38.7%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.88e-01 100.0% 81.2%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 4.71e-01 100.0% 44.2%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.95e-01 100.0% 87.3%
4eqqA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 46.0 5.06e-01 76.6% 89.6%
1n1bB02 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.70 56.0 3.65e-01 90.6% 40.5%
1d3yA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 5.76e-01 96.9% 90.1%
5zzjA02 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.69 56.0 3.61e-01 90.6% 40.1%
1f20A01 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.69 52.0 3.85e-01 81.2% 94.5%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 45.0 4.60e-01 81.2% 69.8%
3fdiB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 55.0 3.96e-01 89.1% 83.2%
2rhmC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.67 46.0 3.31e-01 71.9% 27.4%
3i4uA01 1.20.120.1080 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.67 54.0 4.79e-01 96.9% 60.8%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 4.25e-01 100.0% 45.0%
2qtlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.66 52.0 3.92e-01 85.9% 100.0%
1hm7B00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.65 52.0 3.42e-01 90.6% 47.5%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 57.0 5.49e-01 100.0% 87.7%
1owfA00 4.10.520.10 Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins 0.65 47.0 4.06e-01 76.6% 85.4%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 56.0 5.39e-01 100.0% 86.7%
6pw7A01 1.10.238.180 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.63 47.0 4.54e-01 92.2% 69.3%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 47.0 4.15e-01 82.8% 61.5%
3gagA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.62 53.0 3.73e-01 96.9% 44.7%
3vokA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.62 51.0 3.84e-01 95.3% 58.5%
3tjmA02 1.10.1470.20 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › Fatty acid synthase; domain 2 0.61 45.0 4.11e-01 81.2% 72.2%
6xgzE01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.60 51.0 3.43e-01 95.3% 26.9%
4cfsA02 1.10.210.20 Mainly Alpha › Orthogonal Bundle › Uteroglobin › 0.60 42.0 4.12e-01 73.4% 100.0%
4r6hA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 51.0 3.52e-01 96.9% 45.7%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 48.0 4.49e-01 100.0% 72.0%
2nogB02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 47.0 4.63e-01 100.0% 82.9%
5iaiA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.58 50.0 3.55e-01 100.0% 44.0%
2bl0C01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.56 43.0 4.11e-01 92.2% 72.0%
7o1rA01 1.10.489.10 Mainly Alpha › Orthogonal Bundle › Chloroperoxidase › Chloroperoxidase-like 0.56 45.0 3.34e-01 96.9% 30.7%
3k7dA03 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.56 44.0 3.39e-01 82.8% 44.0%
8bykA01 1.50.10.20 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.56 48.0 2.91e-01 95.3% 17.1%
6tqfA01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.56 42.0 2.66e-01 85.9% 38.4%
3k01A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.55 47.0 3.39e-01 100.0% 46.9%
6f8hC00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.54 41.0 3.66e-01 82.8% 77.4%
7eebI01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 45.0 3.39e-01 98.4% 36.1%
3uorB02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 43.0 3.20e-01 96.9% 47.1%
2vk9A03 1.10.3730.30 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › 0.53 40.0 3.53e-01 82.8% 70.4%
8ctsB01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 41.0 3.71e-01 84.4% 64.4%
3ousA00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 38.0 3.57e-01 82.8% 72.0%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929586 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.94 71.0 6.30e-01 78.1% 77.6%
5044812 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.89 78.0 5.21e-01 100.0% 27.1%
5029028 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.88 74.0 5.85e-01 92.2% 47.5%
3398923 101.1.2.248 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.88 78.0 7.23e-01 100.0% 77.5%
3413051 101.1.2.248 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.87 78.0 7.77e-01 100.0% 95.4%
4928641 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.87 68.0 6.41e-01 85.9% 70.7%
3401123 101.1.2.248 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.86 76.0 7.20e-01 98.4% 81.3%
3413561 101.1.2.248 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.85 78.0 6.54e-01 100.0% 61.0%
3626211 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 77.0 6.68e-01 100.0% 83.2%
4326472 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.85 73.0 7.50e-01 100.0% 98.3%
3390278 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 77.0 7.70e-01 100.0% 98.5%
4629323 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.84 77.0 7.45e-01 100.0% 94.3%
3989612 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.84 70.0 7.24e-01 98.4% 96.7%
4191159 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 68.0 7.05e-01 100.0% 95.0%
3404553 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 76.0 7.61e-01 100.0% 98.5%
2325472 101.1.2.25 ↗ alpha arrays › HTH › HTH › winged helix domain › FUR 0.82 75.0 5.82e-01 100.0% 50.0%
3587524 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 75.0 6.37e-01 100.0% 69.0%
4033774 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 70.0 7.19e-01 96.9% 98.3%
4021477 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 73.0 6.62e-01 100.0% 84.7%
4210864 101.1.2.808 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30520 0.81 68.0 7.05e-01 100.0% 98.3%
4369318 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 70.0 7.20e-01 100.0% 100.0%
4217857 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 70.0 7.06e-01 100.0% 93.8%
5002881 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 73.0 6.25e-01 100.0% 67.0%
3262459 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 70.0 5.97e-01 98.4% 86.7%
3816436 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.80 73.0 5.92e-01 100.0% 59.1%
4220501 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.80 72.0 6.32e-01 100.0% 77.9%
5054005 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 71.0 6.33e-01 100.0% 78.9%
3832037 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.80 71.0 4.62e-01 100.0% 24.6%
4229907 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.80 71.0 6.93e-01 100.0% 100.0%
3381711 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.80 72.0 6.08e-01 100.0% 61.0%
3861472 101.1.2.160 ↗ alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.80 71.0 6.95e-01 98.4% 97.1%
4960839 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 60.0 5.17e-01 81.2% 56.0%
4008061 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 72.0 6.80e-01 100.0% 86.7%
4026719 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 71.0 5.69e-01 100.0% 56.0%
5011050 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.80 73.0 5.74e-01 100.0% 52.0%
3450461 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.80 71.0 5.43e-01 100.0% 48.3%
4927049 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.79 72.0 6.17e-01 100.0% 66.0%
3372110 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.79 72.0 7.00e-01 100.0% 95.7%
4124728 101.1.2.67 ↗ alpha arrays › HTH › HTH › winged helix domain › HARE-HTH 0.79 70.0 5.94e-01 100.0% 63.8%
3221607 101.1.2.160 ↗ alpha arrays › HTH › HTH › winged helix domain › BLACT_WH 0.79 70.0 7.05e-01 100.0% 96.9%
3643333 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.79 71.0 6.32e-01 100.0% 74.4%
4304583 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 71.0 7.10e-01 100.0% 98.5%
3725745 101.1.2.94 ↗ alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.79 71.0 6.17e-01 100.0% 69.5%
3653189 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.79 72.0 7.19e-01 100.0% 100.0%
3378595 101.1.2.10 ↗ alpha arrays › HTH › HTH › winged helix domain › Linker_histone 0.79 71.0 5.65e-01 100.0% 53.6%
4167856 101.1.2.280 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.79 68.0 6.18e-01 100.0% 71.8%
3639822 101.1.2.94 ↗ alpha arrays › HTH › HTH › winged helix domain › ANAPC2 0.79 70.0 4.91e-01 100.0% 32.7%
4991630 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.94e-01 93.8% 98.3%
3738687 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.78 71.0 5.43e-01 100.0% 60.0%
5058906 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 69.0 6.42e-01 100.0% 91.3%
4963009 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.28e-01 96.9% 81.2%
3228605 101.1.2.309 ↗ alpha arrays › HTH › HTH › winged helix domain › GPAT_C 0.78 70.0 4.99e-01 100.0% 39.5%
4558680 101.1.2.807 ↗ alpha arrays › HTH › HTH › winged helix domain › MC6 0.78 71.0 6.57e-01 100.0% 82.5%
5082787 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.78 69.0 5.95e-01 98.4% 63.0%
4276676 101.1.2.280 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.78 67.0 6.36e-01 100.0% 81.3%
5074576 101.1.2.927 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.78 66.0 5.78e-01 98.4% 63.2%
4941477 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 70.0 5.97e-01 100.0% 68.0%
3398316 101.1.2.248 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.77 69.0 6.24e-01 100.0% 74.1%
4510528 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.77 52.0 4.58e-01 76.6% 50.0%
3487239 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 68.0 6.83e-01 100.0% 98.5%
4991685 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 67.0 5.62e-01 100.0% 67.3%
3631239 101.1.2.68 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.76 67.0 4.82e-01 100.0% 55.7%
5047367 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 68.0 6.05e-01 100.0% 85.6%
4958945 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 69.0 5.33e-01 100.0% 47.4%
5038818 247.1.1.1 ↗ a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.76 66.0 4.30e-01 98.4% 22.9%
4599963 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 66.0 6.06e-01 100.0% 78.8%
3618188 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.75 67.0 5.61e-01 100.0% 62.7%
4022146 101.1.2.520 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7779 0.75 65.0 5.64e-01 98.4% 66.0%
4986171 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.75 66.0 5.93e-01 100.0% 86.7%
4967393 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 66.0 6.47e-01 100.0% 94.3%
3554511 101.1.2.206 ↗ alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.75 66.0 6.17e-01 98.4% 83.7%
4808209 101.1.2.67 ↗ alpha arrays › HTH › HTH › winged helix domain › HARE-HTH 0.75 66.0 5.69e-01 100.0% 66.3%
4971669 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 65.0 5.03e-01 100.0% 45.5%
3598688 109.1.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.74 57.0 4.10e-01 81.2% 64.7%
3217621 101.1.2.265 ↗ alpha arrays › HTH › HTH › winged helix domain › Stork_head 0.74 66.0 6.43e-01 100.0% 95.7%
3594892 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 4.85e-01 100.0% 63.1%
3219983 101.1.2.200 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_65 0.73 63.0 5.50e-01 100.0% 68.0%
3573598 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.72 62.0 5.29e-01 100.0% 65.5%
3341091 101.35.1.6 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › A_thal_3526 0.71 53.0 5.31e-01 100.0% 80.0%
3829115 101.1.1.270 ↗ alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 0.70 58.0 5.77e-01 92.2% 92.3%
None — 0.70 60.0 6.11e-01 100.0% 98.4%
3968778 101.1.2.8 ↗ alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.70 61.0 5.29e-01 100.0% 64.0%
5022856 7014.1.1.1 ↗ alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA 0.69 59.0 4.69e-01 92.2% 80.6%
3988383 101.1.2.8 ↗ alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.69 60.0 5.23e-01 100.0% 68.0%
3312794 101.1.3.22 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › A_thal_3526 0.69 58.0 5.53e-01 93.8% 80.0%
3439843 101.1.1.270 ↗ alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 0.69 58.0 5.28e-01 93.8% 70.6%
3388393 101.1.2.8 ↗ alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.69 59.0 5.38e-01 100.0% 72.2%
3928777 101.1.2.154 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.68 57.0 4.94e-01 100.0% 60.0%
4217499 101.1.2.8 ↗ alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C 0.67 58.0 5.07e-01 100.0% 64.0%
4274974 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.67 49.0 4.17e-01 76.6% 82.0%
3607372 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.66 55.0 4.54e-01 90.6% 52.7%
4048893 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.65 48.0 4.71e-01 78.1% 88.6%
3670216 108.1.1.113 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5, EF-hand_6 0.63 55.0 4.98e-01 96.9% 74.1%
4183750 101.17.1.1 ↗ alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins › Bac_DNA_binding 0.63 46.0 4.23e-01 76.6% 76.2%
4411663 3584.1.1.1 ↗ alpha arrays › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA polymerase III finger domain › DNA_pol3_finger 0.62 48.0 3.27e-01 84.4% 37.9%
3959369 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 4.16e-01 98.4% 86.1%
10305 7516.1.1.25 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › TcdA_TcdB 0.51 44.0 2.66e-01 96.9% 30.7%