←Back to structures
IMGVR_UViG_3300021495_000001-3300021495-Ga0190352_100000375
Arc-VirIMGVR_UViG_3300021495_000001-3300021495-Ga0190352_100000375
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-125
Domain cluster:
rep: IMGVR_UViG_3300021509_000003-3300021509-Ga0190304_100009133__D2-101
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b8oA01 | 3.30.1890.10 | Alpha Beta › 2-Layer Sandwich › Bacterial polysaccharide co-polymerase-like › FepE-like | 0.68 | 58.0 | 4.74e-01 | 90.3% | 72.3% |
| 2yqrA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.62 | 44.0 | 4.77e-01 | 73.4% | 100.0% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 38.0 | 4.33e-01 | 75.0% | 86.7% |
| 1im3D00 | 2.60.40.1200 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 38.0 | 4.31e-01 | 72.6% | 86.3% |
| 3ig5A02 | 3.30.590.50 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.58 | 41.0 | 2.97e-01 | 74.2% | 28.2% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 38.0 | 4.31e-01 | 75.8% | 90.5% |
| 1ln1A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 41.0 | 3.54e-01 | 78.2% | 85.7% |
| 3of6E00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 38.0 | 4.17e-01 | 75.0% | 86.5% |
| 1smvC00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 40.0 | 3.33e-01 | 79.0% | 78.4% |
| 3gcfA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.53 | 38.0 | 3.02e-01 | 73.4% | 74.0% |
| 2fgeA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 39.0 | 3.22e-01 | 79.0% | 79.9% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 37.0 | 4.00e-01 | 75.0% | 85.2% |
| 1a21A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 32.0 | 3.49e-01 | 78.2% | 75.5% |
| 4iykA02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 37.0 | 3.84e-01 | 76.6% | 87.3% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947208 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.65 | 46.0 | 4.96e-01 | 73.4% | 94.3% |
| None | — | 0.64 | 49.0 | 3.39e-01 | 79.0% | 45.8% | |
| 3311358 | 304.8.1.67 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7377 | 0.63 | 43.0 | 4.25e-01 | 78.2% | 66.2% |
| 3638657 | 304.6.1.3 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › BBE | 0.62 | 45.0 | 3.52e-01 | 75.8% | 43.8% |
| 5002566 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 38.0 | 4.40e-01 | 74.2% | 85.6% |
| 4026401 | 878.1.1.7 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Pro_sub2 | 0.61 | 45.0 | 4.83e-01 | 75.8% | 97.1% |
| 3924362 | 329.1.1.0 ↗ | a+b two layers › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain › Prokaryotic AspRS, insert domain | 0.61 | 45.0 | 4.68e-01 | 77.4% | 100.0% |
| 3693358 | 3501.1.1.1 ↗ | a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 | 0.60 | 43.0 | 4.62e-01 | 73.4% | 100.0% |
| 4986289 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.60 | 42.0 | 2.91e-01 | 71.0% | 42.0% |
| 3573519 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 39.0 | 4.42e-01 | 75.0% | 86.3% |
| 5040496 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.57 | 36.0 | 4.30e-01 | 71.8% | 98.8% |
| 5064624 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 36.0 | 3.74e-01 | 75.8% | 66.7% |
| 3735521 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.56 | 41.0 | 4.03e-01 | 79.0% | 70.4% |
| 4997739 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 4.22e-01 | 78.2% | 84.8% |
| 4941520 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 35.0 | 3.98e-01 | 74.2% | 85.6% |
| 4269579 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.55 | 38.0 | 2.92e-01 | 70.2% | 63.2% |
| 3426902 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 37.0 | 4.18e-01 | 71.8% | 92.6% |
| 3823591 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 37.0 | 4.05e-01 | 71.8% | 91.0% |
| 5062458 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.53 | 38.0 | 3.97e-01 | 75.0% | 87.8% |
| 5015035 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 34.0 | 3.94e-01 | 72.6% | 91.1% |
| 5064728 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 37.0 | 3.90e-01 | 75.8% | 80.9% |
| 3838810 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.52 | 44.0 | 3.15e-01 | 93.5% | 69.1% |
| 3306024 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 37.0 | 3.90e-01 | 75.0% | 94.5% |