IMGVR_UViG_3300021495_000001-3300021495-Ga0190352_100000393

Arc-Vir

Identity

68.9 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-69

PDB

Domain cluster: rep: SR-VP_0-2_scaffold_141_4556078_prodigal-single.1__X__X__00401__D5-58

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3f2bA05	6.10.50.10	Special › Helix non-globular › Insulin-like, subunit E ›	0.71	38.0	4.36e-01	81.0%	70.8%
4mtdD01	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.68	39.0	3.49e-01	84.1%	40.9%
3ccgA00	1.10.3210.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432	0.55	42.0	3.06e-01	85.7%	83.1%
2w02B01	1.10.150.640	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle	0.54	38.0	3.63e-01	73.0%	71.6%
1kblA05	1.20.80.30	Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein ›	0.51	40.0	3.68e-01	90.5%	64.0%
3h4cA01	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.51	41.0	3.63e-01	92.1%	86.5%
2ph5A02	3.30.360.30	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › homospermidine synthase like	0.50	37.0	2.40e-01	79.4%	83.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4443422	212.1.1.22 ↗	a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Topo-VIb_trans	0.64	39.0	2.74e-01	74.6%	19.0%
3410646	223.1.1.71 ↗	a+b three layers › Profilin-like › sensor domains › sensor domains › VGCC_alpha2	0.51	40.0	2.68e-01	88.9%	71.9%