Back to structures

IMGVR_UViG_3300021495_000001-3300021495-Ga0190352_100000396

Arc-Vir

IMGVR_UViG_3300021495_000001-3300021495-Ga0190352_100000396

Quality

82.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-178
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jswA00 1.20.1410.10 Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain 0.60 43.0 3.90e-01 74.2% 94.2%
2mgyA01 1.20.1260.100 Mainly Alpha › Up-down Bundle › Ferritin › TspO/MBR protein 0.58 41.0 3.93e-01 74.2% 95.0%
1xfiA02 1.20.1700.10 Mainly Alpha › Up-down Bundle › AF1104-like › AF1104-like 0.55 30.0 3.54e-01 71.2% 76.7%
2r6aC01 1.10.860.10 Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A 0.51 30.0 3.41e-01 84.1% 77.1%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283972 191.1.1.1 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_1 0.56 33.0 3.32e-01 84.8% 57.7%
3219672 601.1.2.79 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › TMEM126_like 0.56 50.0 4.43e-01 100.0% 78.5%
3994884 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.55 40.0 3.06e-01 74.2% 64.5%
3801151 7015.1.1.0 alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.55 40.0 3.54e-01 76.5% 84.4%
3673378 188.1.1.4 alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › PF28741 0.52 44.0 3.88e-01 92.4% 90.5%