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IMGVR_UViG_3300021500_000109-3300021500-Ga0190347_100095911

Arc-Vir

IMGVR_UViG_3300021500_000109-3300021500-Ga0190347_100095911

Quality

74.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 5-43
PDB
Domain cluster: representative
Pfam (5)
AccessionNameScoreE-valueQ covHMM cov
PF04545.23 Sigma70_r4 31.1 1.90e-07 100.0% 66.0%
PF08281.19 best Sigma70_r4_2 36.8 3.50e-09 100.0% 64.8%
PF13384.13 HTH_23 31.4 1.80e-07 87.2% 60.0%
PF13412.13 HTH_24 25.8 9.00e-06 84.6% 56.2%
PF09339.17 HTH_IclR 24.7 2.30e-05 71.8% 48.1%
CATH (97)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.98 91.0 7.57e-01 100.0% 61.9%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.98 87.0 7.62e-01 100.0% 68.5%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 82.0 7.15e-01 97.4% 66.1%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 84.0 7.46e-01 100.0% 72.2%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.93 81.0 7.20e-01 100.0% 69.1%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 81.0 7.37e-01 100.0% 74.5%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 77.0 6.68e-01 100.0% 62.1%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 81.0 7.75e-01 100.0% 84.4%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 81.0 6.26e-01 100.0% 47.5%
2w48B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.91 82.0 7.43e-01 100.0% 76.9%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 80.0 6.45e-01 100.0% 52.8%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 81.0 6.93e-01 100.0% 63.9%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 77.0 6.86e-01 100.0% 67.9%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 79.0 6.84e-01 100.0% 65.5%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 80.0 6.26e-01 100.0% 50.0%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.89 78.0 5.25e-01 100.0% 27.7%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 80.0 6.66e-01 100.0% 60.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 79.0 6.61e-01 100.0% 60.3%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.89 78.0 4.66e-01 100.0% 15.6%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.89 80.0 5.31e-01 100.0% 27.5%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 79.0 5.67e-01 100.0% 37.1%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 73.0 6.37e-01 100.0% 61.7%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 76.0 6.07e-01 100.0% 50.7%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 74.0 5.99e-01 100.0% 50.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 76.0 6.81e-01 100.0% 74.1%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 76.0 6.42e-01 100.0% 60.9%
4a0zA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 75.0 6.55e-01 100.0% 67.8%
2e7xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 75.0 6.82e-01 100.0% 76.9%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 76.0 7.48e-01 100.0% 97.6%
4qicC01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.85 73.0 5.10e-01 100.0% 32.0%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.85 72.0 5.38e-01 100.0% 38.6%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 71.0 6.55e-01 94.9% 76.0%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 73.0 5.57e-01 100.0% 43.7%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 74.0 6.59e-01 100.0% 72.7%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.83 63.0 5.26e-01 82.1% 50.0%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.82 69.0 5.31e-01 100.0% 41.5%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 70.0 6.78e-01 100.0% 88.6%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 6.05e-01 100.0% 61.9%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.44e-01 100.0% 80.0%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 68.0 5.78e-01 100.0% 57.6%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.81 71.0 4.88e-01 100.0% 31.3%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 69.0 6.05e-01 100.0% 65.0%
3mkzN00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.80 70.0 5.05e-01 100.0% 40.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 68.0 5.92e-01 100.0% 63.5%
3w6kC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.29e-01 100.0% 48.3%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.80 66.0 4.87e-01 100.0% 35.8%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 5.10e-01 100.0% 38.5%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 66.0 5.86e-01 100.0% 67.2%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 6.83e-01 100.0% 97.4%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 5.80e-01 100.0% 62.5%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 5.27e-01 100.0% 44.3%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.78 65.0 4.89e-01 100.0% 41.7%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 4.63e-01 100.0% 30.3%
6sdkA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.78 67.0 5.06e-01 100.0% 41.2%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.04e-01 100.0% 41.9%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.78 65.0 4.49e-01 100.0% 28.2%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 4.47e-01 100.0% 28.4%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 5.48e-01 100.0% 55.6%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 65.0 4.46e-01 100.0% 28.2%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 4.45e-01 100.0% 29.2%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 5.59e-01 100.0% 59.7%
4yifF00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 4.51e-01 100.0% 30.0%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 4.44e-01 100.0% 25.8%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 4.37e-01 100.0% 26.1%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 5.14e-01 100.0% 46.4%
1etkA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 66.0 5.34e-01 100.0% 54.7%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 4.34e-01 100.0% 29.0%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.76 61.0 5.86e-01 94.9% 82.6%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 66.0 5.39e-01 100.0% 61.1%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 5.41e-01 100.0% 63.4%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 4.39e-01 100.0% 28.6%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 4.35e-01 100.0% 27.4%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 61.0 5.86e-01 92.3% 91.3%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 4.31e-01 100.0% 26.0%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 64.0 5.38e-01 100.0% 58.6%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 67.0 5.33e-01 100.0% 52.6%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 4.19e-01 100.0% 29.9%
3cjdA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.74 62.0 4.03e-01 100.0% 26.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 64.0 5.43e-01 100.0% 61.5%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 5.00e-01 100.0% 63.7%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.12e-01 100.0% 63.6%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 60.0 4.98e-01 92.3% 54.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.22e-01 100.0% 29.9%
3mvpA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 59.0 5.62e-01 94.9% 93.6%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 59.0 5.69e-01 97.4% 85.1%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.72 55.0 5.45e-01 89.7% 87.8%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.86e-01 100.0% 55.1%
3vuqB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.70 61.0 3.98e-01 100.0% 27.3%
4kibA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.41e-01 100.0% 40.4%
5zyrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 3.92e-01 100.0% 26.5%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 57.0 5.24e-01 100.0% 78.2%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 4.41e-01 79.5% 53.4%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.69 60.0 5.09e-01 100.0% 67.2%
2id3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 55.0 5.18e-01 94.9% 89.8%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 58.0 3.70e-01 100.0% 23.7%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 56.0 3.72e-01 100.0% 27.7%
4jykA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 55.0 4.93e-01 100.0% 87.9%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4060647 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.99 93.0 7.62e-01 100.0% 60.0%
3953011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.98 91.0 7.94e-01 100.0% 70.9%
3954433 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.97 90.0 8.55e-01 100.0% 86.7%
3786618 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.97 90.0 6.04e-01 100.0% 31.5%
3873677 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.97 89.0 7.13e-01 100.0% 55.7%
3401087 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.96 89.0 8.09e-01 100.0% 78.0%
4293871 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.96 89.0 7.81e-01 100.0% 70.9%
3590753 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 89.0 8.08e-01 100.0% 78.0%
3968008 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 88.0 8.04e-01 100.0% 78.0%
3972638 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 88.0 7.23e-01 100.0% 60.0%
3973360 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 87.0 6.99e-01 100.0% 55.7%
3983411 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.95 87.0 6.84e-01 100.0% 52.0%
3971860 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.95 86.0 7.88e-01 100.0% 78.0%
4533441 101.1.6.4 alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.94 86.0 6.30e-01 100.0% 41.1%
3281471 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 86.0 6.62e-01 100.0% 48.8%
5027753 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 85.0 8.07e-01 100.0% 86.7%
3967026 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 85.0 6.70e-01 100.0% 52.0%
4944726 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 85.0 7.27e-01 100.0% 65.0%
3926525 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.93 82.0 8.21e-01 97.4% 95.0%
4174590 101.1.2.61 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4 0.93 85.0 7.04e-01 100.0% 60.0%
2792505 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.93 85.0 7.40e-01 100.0% 70.2%
3967748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 85.0 6.43e-01 100.0% 45.9%
3971395 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 84.0 6.66e-01 100.0% 52.0%
3973709 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 84.0 6.01e-01 100.0% 37.1%
4393383 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.93 84.0 8.37e-01 100.0% 97.5%
4237551 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 84.0 6.18e-01 100.0% 42.1%
2464007 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 84.0 6.94e-01 100.0% 59.1%
4007596 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.93 85.0 7.74e-01 100.0% 78.0%
3284469 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.93 83.0 6.61e-01 100.0% 52.0%
5051712 101.1.4.90 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_23 0.93 85.0 7.44e-01 100.0% 70.9%
2448404 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.92 84.0 7.15e-01 100.0% 65.0%
4966195 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.92 81.0 6.66e-01 100.0% 55.7%
3969641 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.92 84.0 6.48e-01 100.0% 48.8%
4530655 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 83.0 6.03e-01 100.0% 39.0%
4520564 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 83.0 6.45e-01 100.0% 50.0%
3971149 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 83.0 6.43e-01 100.0% 48.8%
4663875 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.92 83.0 4.98e-01 100.0% 16.2%
4413387 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.92 81.0 6.82e-01 100.0% 60.0%
3834548 101.1.3.12 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › PF26138 0.92 82.0 6.84e-01 100.0% 60.0%
3282225 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 84.0 6.46e-01 100.0% 48.8%
3279339 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.92 83.0 5.20e-01 100.0% 21.1%
3283500 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.92 83.0 7.61e-01 100.0% 80.0%
4947436 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 83.0 7.33e-01 100.0% 70.9%
3987867 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 83.0 7.61e-01 100.0% 78.0%
3969325 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.92 82.0 6.66e-01 100.0% 55.7%
3951829 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.92 84.0 6.33e-01 100.0% 45.9%
4303963 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 82.0 6.53e-01 100.0% 52.0%
None 0.91 82.0 5.83e-01 100.0% 35.8%
4238054 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.91 83.0 4.93e-01 100.0% 15.9%
3860590 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.91 82.0 7.51e-01 100.0% 78.0%
None 0.91 82.0 4.91e-01 100.0% 15.9%
3972713 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.91 81.0 6.01e-01 100.0% 41.1%
4998401 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.91 80.0 7.37e-01 100.0% 78.0%
5023952 101.1.2.888 alpha arrays › HTH › HTH › winged helix domain › Sigma70_r4_2 0.91 81.0 6.59e-01 100.0% 55.7%
4945127 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 80.0 6.15e-01 100.0% 45.9%
4962330 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.91 80.0 6.14e-01 100.0% 47.1%
4037682 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.90 82.0 5.94e-01 100.0% 39.0%
3955987 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 81.0 5.97e-01 100.0% 41.1%
4243530 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 81.0 6.77e-01 100.0% 60.0%
2817645 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 81.0 6.28e-01 100.0% 48.8%
3959929 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 80.0 6.25e-01 100.0% 48.8%
4233279 142.1.1.0 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.90 81.0 4.87e-01 100.0% 16.2%
3959876 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 80.0 5.83e-01 100.0% 39.0%
3284011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 81.0 6.58e-01 100.0% 55.7%
3971665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 79.0 6.33e-01 100.0% 52.0%
3974736 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 80.0 6.15e-01 100.0% 45.9%
3967675 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.90 80.0 7.33e-01 100.0% 78.0%
4534822 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.89 79.0 6.30e-01 100.0% 52.0%
4626741 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 77.0 5.79e-01 100.0% 41.1%
3978988 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.89 77.0 4.83e-01 94.9% 21.1%
4202221 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.89 80.0 6.56e-01 100.0% 57.4%
4577850 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.89 79.0 5.79e-01 100.0% 39.4%
3283374 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 78.0 5.81e-01 100.0% 41.1%
None 0.89 78.0 4.69e-01 100.0% 15.7%
3961604 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 78.0 5.73e-01 100.0% 40.0%
5064701 101.1.2.879 alpha arrays › HTH › HTH › winged helix domain › DUF134 0.88 77.0 6.09e-01 100.0% 48.8%
4244028 101.1.1.107 alpha arrays › HTH › HTH › Three-helical HTH › DUF134 0.88 77.0 6.70e-01 100.0% 66.7%
4383273 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.88 76.0 5.19e-01 100.0% 28.5%
4541333 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 78.0 7.18e-01 100.0% 78.0%
3291331 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.88 79.0 6.16e-01 100.0% 48.8%
3412711 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.88 76.0 5.92e-01 100.0% 45.9%
4683276 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 76.0 5.71e-01 100.0% 42.1%
4980021 101.1.3.33 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › DUF134 0.87 76.0 6.28e-01 100.0% 55.7%
4148347 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.87 76.0 5.57e-01 100.0% 37.5%
3163616 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 75.0 5.65e-01 100.0% 42.6%
3389609 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.87 75.0 6.21e-01 100.0% 55.7%
3284051 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.86 75.0 6.35e-01 100.0% 60.0%
4280807 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.86 74.0 6.69e-01 100.0% 70.9%
3620216 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 73.0 5.74e-01 100.0% 45.9%
3410592 101.1.8.25 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_psq 0.86 75.0 6.72e-01 100.0% 70.9%
3469752 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.86 74.0 7.10e-01 100.0% 86.7%
3589532 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 72.0 5.45e-01 100.0% 40.8%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.86 74.0 6.26e-01 100.0% 60.0%
3800176 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 72.0 5.66e-01 100.0% 45.9%
4948834 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 71.0 6.88e-01 97.4% 93.2%
5046600 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 70.0 5.35e-01 94.9% 42.2%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 70.0 5.38e-01 100.0% 42.1%
3477654 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.82 69.0 6.29e-01 100.0% 74.5%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.80 68.0 5.46e-01 100.0% 48.8%
3738604 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 4.50e-01 100.0% 38.1%
D2 medium residues 56-102
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 75.0 6.95e-01 100.0% 91.4%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 74.0 6.57e-01 100.0% 79.1%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 73.0 6.92e-01 100.0% 92.9%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 72.0 6.02e-01 100.0% 66.3%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.81 72.0 4.63e-01 100.0% 25.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 6.17e-01 100.0% 73.6%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 6.04e-01 100.0% 69.3%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.79 64.0 4.20e-01 100.0% 22.2%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 68.0 6.50e-01 100.0% 83.9%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 67.0 5.75e-01 100.0% 64.5%
6juvB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.57e-01 100.0% 89.3%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 5.31e-01 100.0% 60.9%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 61.0 5.66e-01 97.9% 96.8%
5xe7A01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.73 56.0 4.04e-01 87.2% 28.9%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.82e-01 100.0% 61.1%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.07e-01 100.0% 80.0%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 60.0 4.71e-01 100.0% 66.7%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.70 60.0 4.94e-01 100.0% 64.0%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.85e-01 100.0% 77.0%
4dyqA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 57.0 4.59e-01 100.0% 50.5%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 5.14e-01 95.7% 100.0%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.04e-01 95.7% 89.4%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 53.0 5.12e-01 95.7% 98.3%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.66 55.0 4.50e-01 100.0% 53.6%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.65 47.0 4.89e-01 91.5% 95.1%
3ckyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.65 54.0 3.99e-01 97.9% 82.8%
3mw6B00 1.10.1710.10 Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain 0.64 52.0 4.31e-01 100.0% 54.3%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 4.40e-01 97.9% 65.1%
7n1nB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 46.0 4.18e-01 76.6% 60.3%
1wgfA01 1.10.30.10 Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain 0.62 42.0 4.13e-01 78.7% 64.2%
2cvzA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.62 49.0 3.73e-01 95.7% 83.3%
7dklA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 51.0 4.25e-01 97.9% 93.3%
3rmqA02 6.10.140.1650 Special › Helix non-globular › Helix Hairpins › 0.61 48.0 4.56e-01 87.2% 73.2%
4usaA02 1.10.150.120 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain 0.61 50.0 3.85e-01 97.9% 45.4%
4asvA00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.58 45.0 4.05e-01 100.0% 82.3%
1dliA03 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.57 47.0 3.95e-01 97.9% 92.2%
4fcgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.57 42.0 2.60e-01 97.9% 12.8%
3bujA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.57 45.0 2.73e-01 100.0% 61.2%
3h37A03 1.20.58.1960 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 44.0 3.40e-01 100.0% 35.9%
3h38A02 1.10.3090.10 Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 0.55 42.0 2.76e-01 100.0% 17.4%
2gytA01 1.10.287.2070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 39.0 3.64e-01 97.9% 71.8%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4019885 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.97 78.0 7.35e-01 85.1% 74.5%
3205204 101.1.1.67 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 0.94 77.0 7.29e-01 87.2% 75.9%
3210083 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 78.0 7.11e-01 93.6% 73.3%
3197445 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 78.0 7.33e-01 93.6% 80.0%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 71.0 6.72e-01 89.4% 74.5%
4510105 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 68.0 7.26e-01 85.1% 97.5%
3632013 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 76.0 7.44e-01 93.6% 88.0%
3483711 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 76.0 7.17e-01 95.7% 87.3%
3603167 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.85 73.0 6.56e-01 100.0% 69.2%
3787785 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 66.0 6.76e-01 85.1% 88.9%
3946608 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 76.0 6.59e-01 100.0% 75.7%
3783338 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 67.0 6.81e-01 91.5% 91.1%
3248755 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.84 75.0 6.12e-01 100.0% 56.5%
3900411 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.84 74.0 5.99e-01 100.0% 57.3%
4537351 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.83 67.0 6.38e-01 91.5% 74.5%
4492035 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 74.0 6.47e-01 100.0% 75.7%
3757222 101.1.1.3 alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding 0.83 74.0 7.03e-01 100.0% 92.7%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 72.0 6.64e-01 97.9% 76.7%
3941764 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 74.0 6.59e-01 100.0% 81.5%
3290024 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.83 74.0 6.16e-01 100.0% 66.3%
3981688 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 73.0 6.56e-01 100.0% 86.2%
4010691 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 73.0 6.96e-01 100.0% 94.5%
3977009 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 72.0 6.31e-01 100.0% 75.7%
5083903 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 72.0 5.61e-01 95.7% 63.2%
4212645 101.1.6.31 alpha arrays › HTH › HTH › TrpR › Phage_integrase 0.82 61.0 6.45e-01 85.1% 95.0%
3969657 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 73.0 6.20e-01 100.0% 70.7%
3971990 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 72.0 5.93e-01 100.0% 62.4%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.81 72.0 6.65e-01 100.0% 78.3%
4974224 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 69.0 6.41e-01 95.7% 76.7%
4578719 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 72.0 6.50e-01 100.0% 82.5%
4932994 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.80 66.0 5.77e-01 91.5% 70.0%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.80 61.0 6.27e-01 87.2% 88.9%
5022417 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.79 69.0 5.71e-01 100.0% 62.4%
5013051 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 70.0 5.04e-01 100.0% 50.8%
4071215 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 67.0 6.37e-01 100.0% 81.8%
5083506 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.79 67.0 4.47e-01 100.0% 24.9%
3290277 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 65.0 6.40e-01 100.0% 90.0%
4034069 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 66.0 6.25e-01 97.9% 80.0%
3514120 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.78 63.0 5.87e-01 97.9% 71.7%
3857628 101.1.3.29 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › CENP-B_N 0.78 58.0 5.29e-01 85.1% 60.0%
3280314 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.78 60.0 5.80e-01 91.5% 74.5%
4680413 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 64.0 5.84e-01 100.0% 69.2%
3945143 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.78 61.0 5.83e-01 97.9% 74.5%
4194508 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 65.0 6.19e-01 100.0% 81.8%
3385608 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 60.0 5.58e-01 97.9% 68.3%
4954765 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.77 63.0 6.08e-01 100.0% 81.8%
3941922 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 58.0 5.53e-01 85.1% 72.7%
4400327 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.76 64.0 5.22e-01 100.0% 51.1%
3927210 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.76 64.0 4.55e-01 100.0% 42.0%
4558962 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.75 64.0 6.11e-01 100.0% 83.6%
3602804 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.75 62.0 6.16e-01 100.0% 90.0%
3957642 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.75 66.0 6.27e-01 100.0% 89.1%
3290335 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.75 62.0 5.60e-01 97.9% 67.7%
3837930 101.1.1.347 alpha arrays › HTH › HTH › Three-helical HTH › Phage_integrase 0.74 61.0 5.86e-01 100.0% 80.0%
4989022 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.74 59.0 5.99e-01 89.4% 93.3%
3943131 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.74 58.0 5.41e-01 95.7% 68.3%
4958468 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.74 64.0 5.94e-01 100.0% 81.7%
5080584 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.74 53.0 5.43e-01 89.4% 82.2%
5045749 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.74 59.0 5.33e-01 89.4% 64.6%
4173465 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.74 58.0 5.60e-01 100.0% 76.4%
4281782 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.74 63.0 5.46e-01 100.0% 61.3%
4475168 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.74 62.0 4.12e-01 100.0% 23.6%
3589854 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.73 63.0 5.71e-01 97.9% 70.8%
4441096 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.73 62.0 5.80e-01 100.0% 76.7%
4970237 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.73 59.0 6.01e-01 91.5% 95.6%
3392384 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 59.0 5.17e-01 93.6% 58.7%
3945774 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.72 61.0 6.01e-01 97.9% 100.0%
3969534 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.72 58.0 5.62e-01 100.0% 80.0%
4119313 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.72 58.0 5.54e-01 95.7% 78.2%
1695424 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.72 56.0 4.98e-01 97.9% 58.6%
1267973 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.72 61.0 5.37e-01 100.0% 66.7%
3243275 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 4.13e-01 100.0% 67.9%
4089208 101.1.1.25 alpha arrays › HTH › HTH › Three-helical HTH › DUF433 0.70 53.0 4.92e-01 87.2% 73.8%
4959580 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.70 55.0 5.48e-01 97.9% 84.0%
4031830 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.70 54.0 5.32e-01 89.4% 82.0%
4608916 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.70 58.0 5.63e-01 100.0% 83.6%
5076149 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 54.0 4.87e-01 91.5% 71.4%
4028433 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 4.97e-01 100.0% 68.8%
3989290 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.69 59.0 5.85e-01 97.9% 92.0%
3590293 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 53.0 5.10e-01 91.5% 81.8%
5010328 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 53.0 5.17e-01 95.7% 85.5%
2417767 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.67 53.0 5.00e-01 97.9% 72.9%
3882189 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.61 45.0 4.50e-01 91.5% 82.0%
3441984 145.1.1.0 alpha arrays › F-box domain › F-box domain › F-box domain 0.59 46.0 4.55e-01 91.5% 86.0%
3291671 149.1.1.1 alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 0.55 42.0 2.53e-01 100.0% 26.5%
3483536 5059.1.1.0 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter 0.54 41.0 3.31e-01 97.9% 75.8%