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IMGVR_UViG_3300021507_000025-3300021507-Ga0190316_100054412
Arc-VirIMGVR_UViG_3300021507_000025-3300021507-Ga0190316_100054412
Identity
- Kingdom:
- archaea
Quality
88.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-112
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00263__D4-150
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.64 | 40.0 | 4.16e-01 | 95.3% | 67.3% |
| 3imoC00 | 3.30.920.70 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › | 0.63 | 48.0 | 4.85e-01 | 96.3% | 81.3% |
| 2plgA01 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.59 | 52.0 | 4.89e-01 | 97.2% | 91.7% |
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.58 | 51.0 | 4.54e-01 | 99.1% | 85.8% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 46.0 | 4.27e-01 | 88.8% | 84.3% |
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.57 | 42.0 | 3.52e-01 | 87.9% | 46.3% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.56 | 45.0 | 4.48e-01 | 94.4% | 83.3% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 44.0 | 4.07e-01 | 86.9% | 79.4% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 34.0 | 4.11e-01 | 73.8% | 100.0% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 35.0 | 3.99e-01 | 100.0% | 90.8% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 43.0 | 4.05e-01 | 86.0% | 99.2% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 43.0 | 3.63e-01 | 87.9% | 69.4% |
| 1dbzA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.53 | 42.0 | 3.62e-01 | 88.8% | 59.2% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.52 | 38.0 | 3.45e-01 | 76.6% | 85.3% |
| 2qg7B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.70e-01 | 96.3% | 75.2% |
| 7nn3B01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.29e-01 | 99.1% | 77.1% |
| 1k90A02 | 3.90.1760.10 | Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain | 0.52 | 39.0 | 3.44e-01 | 86.0% | 53.5% |
| 5gv0A00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 44.0 | 3.92e-01 | 97.2% | 79.6% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.51 | 40.0 | 4.11e-01 | 100.0% | 89.2% |
| 1lf6A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.51 | 40.0 | 3.05e-01 | 86.0% | 79.5% |
| 7d8gA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.51 | 39.0 | 3.45e-01 | 84.1% | 71.3% |
| 4mveA00 | 2.40.128.580 | Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain | 0.50 | 41.0 | 3.71e-01 | 88.8% | 80.3% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3246337 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.65 | 47.0 | 3.81e-01 | 76.6% | 78.0% |
| 3788776 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.64 | 45.0 | 3.16e-01 | 72.0% | 35.8% |
| 5079230 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.64 | 55.0 | 5.58e-01 | 98.1% | 95.2% |
| 5078992 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.64 | 45.0 | 4.23e-01 | 72.9% | 94.6% |
| 3242469 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 50.0 | 3.25e-01 | 87.9% | 67.1% |
| 3510695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 39.0 | 4.42e-01 | 95.3% | 86.3% |
| 3229399 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.60 | 39.0 | 2.76e-01 | 75.7% | 20.6% |
| 4935165 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.60 | 47.0 | 3.81e-01 | 84.1% | 74.8% |
| 3468940 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.60 | 44.0 | 3.12e-01 | 77.6% | 33.6% |
| 3645309 | 4099.1.1.27 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › DUF7806 | 0.60 | 47.0 | 4.95e-01 | 94.4% | 94.7% |
| 119405 | 3089.1.1.1 ↗ | a+b two layers › Integron cassette protein VCH_CASS14 › Integron cassette protein VCH_CASS14 › Integron cassette protein VCH_CASS14 › VCH_CASS14 | 0.60 | 50.0 | 4.90e-01 | 97.2% | 85.1% |
| 3678427 | 5.1.4.379 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, WD40_2 | 0.59 | 44.0 | 3.19e-01 | 78.5% | 37.9% |
| 3929846 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 41.0 | 2.99e-01 | 73.8% | 38.6% |
| 3933073 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.58 | 53.0 | 4.36e-01 | 100.0% | 61.6% |
| 3479716 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.58 | 35.0 | 3.85e-01 | 88.8% | 74.1% |
| 4940816 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 37.0 | 3.95e-01 | 72.0% | 73.7% |
| 5011042 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.58 | 42.0 | 4.01e-01 | 77.6% | 65.4% |
| 3679340 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 49.0 | 4.88e-01 | 93.5% | 96.4% |
| 4879580 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.57 | 37.0 | 3.32e-01 | 78.5% | 45.8% |
| 3236870 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.57 | 37.0 | 3.55e-01 | 77.6% | 54.6% |
| 3212817 | 145.1.1.1 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box | 0.56 | 42.0 | 3.76e-01 | 86.9% | 56.0% |
| 4419937 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.56 | 36.0 | 3.96e-01 | 73.8% | 81.2% |
| 3415592 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.56 | 50.0 | 4.47e-01 | 100.0% | 89.3% |
| 3394516 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.56 | 49.0 | 4.47e-01 | 99.1% | 87.5% |
| 4937958 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.54 | 39.0 | 2.83e-01 | 75.7% | 68.9% |
| 3504193 | 220.1.1.49 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH | 0.54 | 38.0 | 3.61e-01 | 72.9% | 70.8% |
| 3990496 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 32.0 | 3.73e-01 | 82.2% | 87.1% |
| 4963006 | 4.1.1.490 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26269 | 0.54 | 40.0 | 4.37e-01 | 91.6% | 98.8% |
| 4989818 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.54 | 43.0 | 3.39e-01 | 85.0% | 87.7% |
| 3267039 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.54 | 37.0 | 3.11e-01 | 83.2% | 40.5% |
| 5010707 | 12.3.1.40 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N | 0.52 | 41.0 | 3.42e-01 | 84.1% | 82.6% |
| 818 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.52 | 41.0 | 3.89e-01 | 85.0% | 100.0% |
| 3812869 | 284.1.3.0 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain | 0.52 | 39.0 | 4.04e-01 | 80.4% | 88.0% |
| 3701925 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.52 | 41.0 | 4.02e-01 | 94.4% | 76.7% |
| 4331289 | 244.2.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Reductase_C | 0.51 | 28.0 | 3.34e-01 | 96.3% | 83.1% |
| 3640483 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 38.0 | 2.94e-01 | 77.6% | 40.4% |
| 3831579 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.51 | 41.0 | 3.01e-01 | 88.8% | 77.1% |
| None | — | 0.51 | 36.0 | 2.63e-01 | 74.8% | 65.0% | |
| 4662378 | 1032.1.1.0 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain | 0.51 | 38.0 | 2.26e-01 | 79.4% | 19.0% |
| 3728883 | 3692.1.1.0 ↗ | a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain | 0.50 | 39.0 | 3.54e-01 | 85.0% | 73.2% |
| 1108151 | 9.20.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein Tcur_1030 › Uncharacterized protein Tcur_1030 › GXWXG,DUF4334 | 0.50 | 41.0 | 3.70e-01 | 88.8% | 79.7% |