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IMGVR_UViG_3300021509_000003-3300021509-Ga0190304_100009119
Arc-VirIMGVR_UViG_3300021509_000003-3300021509-Ga0190304_100009119
Identity
- Kingdom:
- archaea
Quality
79.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 490-558
Domain cluster:
representative
CATH (56)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1skoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.82 | 47.0 | 3.86e-01 | 100.0% | 34.5% |
| 7yh1A01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.74 | 43.0 | 3.63e-01 | 100.0% | 35.1% |
| 1yprA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.73 | 43.0 | 3.53e-01 | 100.0% | 32.8% |
| 3wewA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.68 | 50.0 | 3.45e-01 | 78.3% | 73.0% |
| 1skoA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.68 | 40.0 | 3.39e-01 | 100.0% | 33.6% |
| 3kyeA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.68 | 41.0 | 3.39e-01 | 100.0% | 34.5% |
| 1erjB00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 50.0 | 3.17e-01 | 78.3% | 79.9% |
| 2cy9B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.67 | 50.0 | 4.01e-01 | 78.3% | 59.1% |
| 1zunB03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 46.0 | 3.98e-01 | 72.5% | 94.3% |
| 1njkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.66 | 48.0 | 3.89e-01 | 78.3% | 66.2% |
| 7qs4A01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.65 | 47.0 | 3.48e-01 | 76.8% | 38.5% |
| 4c8bA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.64 | 49.0 | 3.29e-01 | 84.1% | 20.8% |
| 5umsA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 45.0 | 3.98e-01 | 75.4% | 75.5% |
| 3iwaA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 55.0 | 3.81e-01 | 100.0% | 73.4% |
| 3oz2A02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.61 | 52.0 | 4.02e-01 | 95.7% | 43.1% |
| 2gf6A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 44.0 | 3.61e-01 | 78.3% | 65.4% |
| 6pfzD02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 53.0 | 3.62e-01 | 100.0% | 60.7% |
| 1yqzA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.60 | 51.0 | 4.44e-01 | 95.7% | 69.4% |
| 1yemB00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.59 | 49.0 | 3.77e-01 | 94.2% | 89.8% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 42.0 | 3.63e-01 | 76.8% | 73.0% |
| 5kbzB00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.58 | 44.0 | 2.92e-01 | 84.1% | 48.3% |
| 2rloA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 42.0 | 3.47e-01 | 76.8% | 80.5% |
| 3er9B03 | 3.30.460.60 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Poxvirus poly(A) polymerase, nucleotidyltransferase domain | 0.57 | 45.0 | 3.66e-01 | 85.5% | 76.7% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.57 | 41.0 | 3.58e-01 | 78.3% | 78.8% |
| 3tw8A01 | 3.30.450.200 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module | 0.57 | 38.0 | 3.09e-01 | 100.0% | 34.8% |
| 1u2kA02 | 1.10.420.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 2 › Peroxidase, domain 2 | 0.57 | 40.0 | 3.29e-01 | 73.9% | 79.7% |
| 2eenA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.57 | 48.0 | 3.66e-01 | 98.6% | 91.5% |
| 1q1rA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.57 | 49.0 | 4.48e-01 | 100.0% | 92.6% |
| 3dpuB03 | 3.30.310.200 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.56 | 47.0 | 4.13e-01 | 95.7% | 79.6% |
| 4mxtA00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.56 | 46.0 | 3.43e-01 | 92.8% | 80.7% |
| 2gfgA00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.56 | 46.0 | 3.46e-01 | 95.7% | 89.5% |
| 4mnrA02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 40.0 | 2.66e-01 | 78.3% | 89.9% |
| 1z87A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 40.0 | 3.63e-01 | 78.3% | 81.0% |
| 5is8A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.56 | 41.0 | 3.07e-01 | 82.6% | 86.4% |
| 1gesA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.55 | 47.0 | 4.12e-01 | 100.0% | 75.2% |
| 4chmB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.31e-01 | 76.8% | 70.2% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.44e-01 | 76.8% | 71.8% |
| 3oa4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 44.0 | 3.67e-01 | 92.8% | 85.7% |
| 1jlxA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.54 | 37.0 | 2.94e-01 | 72.5% | 56.6% |
| 2ej8B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 38.0 | 3.16e-01 | 73.9% | 79.4% |
| 3ek7A01 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.54 | 46.0 | 3.22e-01 | 98.6% | 34.8% |
| 6k3lB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 40.0 | 3.79e-01 | 84.1% | 63.7% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.54 | 39.0 | 3.46e-01 | 78.3% | 66.3% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 37.0 | 3.16e-01 | 73.9% | 67.7% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 39.0 | 3.35e-01 | 78.3% | 66.7% |
| 1ntvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 39.0 | 3.10e-01 | 78.3% | 70.4% |
| 6gp1A00 | 3.30.1300.40 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › | 0.54 | 36.0 | 3.72e-01 | 71.0% | 81.5% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.54 | 41.0 | 3.51e-01 | 87.0% | 74.6% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.45e-01 | 75.4% | 79.3% |
| 2m38A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 39.0 | 3.19e-01 | 79.7% | 81.5% |
| 3w9iD03 | 3.30.70.1320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like | 0.52 | 44.0 | 3.87e-01 | 94.2% | 79.6% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 36.0 | 3.44e-01 | 75.4% | 82.8% |
| 3voqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 35.0 | 3.10e-01 | 75.4% | 72.4% |
| 1jlcB03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.51 | 36.0 | 3.02e-01 | 76.8% | 92.5% |
| 3rmuA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 43.0 | 3.56e-01 | 100.0% | 87.3% |
| 3so6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 37.0 | 3.03e-01 | 79.7% | 77.4% |
ECOD (79)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3250283 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.81 | 48.0 | 3.80e-01 | 100.0% | 31.5% |
| 3248413 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.76 | 46.0 | 3.62e-01 | 100.0% | 31.1% |
| 5072591 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.76 | 44.0 | 3.67e-01 | 100.0% | 34.8% |
| 4059727 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.75 | 54.0 | 4.07e-01 | 76.8% | 89.7% |
| 4955532 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.74 | 53.0 | 5.10e-01 | 79.7% | 66.3% |
| 2140453 | 223.2.1.12 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › MAPKK1_Int | 0.68 | 40.0 | 3.34e-01 | 100.0% | 32.3% |
| 4966292 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.68 | 57.0 | 5.84e-01 | 92.8% | 96.9% |
| 3931349 | 220.1.1.2 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 | 0.67 | 48.0 | 3.76e-01 | 75.4% | 64.7% |
| 3409245 | 223.2.1.36 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 | 0.67 | 41.0 | 3.60e-01 | 100.0% | 42.0% |
| 3741512 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.66 | 46.0 | 4.01e-01 | 72.5% | 94.3% |
| 3664116 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.66 | 49.0 | 3.06e-01 | 81.2% | 77.8% |
| 3960359 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 46.0 | 3.79e-01 | 72.5% | 85.0% |
| 3781787 | 222.1.1.27 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PF27832 | 0.65 | 46.0 | 3.93e-01 | 73.9% | 60.9% |
| 3782601 | 220.1.1.57 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_20 | 0.64 | 46.0 | 3.74e-01 | 76.8% | 73.1% |
| 4099267 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.63 | 44.0 | 3.54e-01 | 72.5% | 73.3% |
| 4018116 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.63 | 39.0 | 3.27e-01 | 100.0% | 36.4% |
| 1270543 | 244.2.1.1 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim | 0.62 | 54.0 | 4.68e-01 | 100.0% | 78.2% |
| 4933213 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.61 | 38.0 | 3.79e-01 | 100.0% | 60.0% |
| 3820988 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.60 | 44.0 | 3.51e-01 | 76.8% | 65.2% |
| 3858680 | 220.1.1.120 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GARIL_Rab2_bd | 0.59 | 42.0 | 3.12e-01 | 73.9% | 76.5% |
| 4998687 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 42.0 | 3.43e-01 | 75.4% | 68.5% |
| 3918879 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 42.0 | 3.34e-01 | 76.8% | 53.3% |
| 3873956 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 41.0 | 3.45e-01 | 73.9% | 63.3% |
| 3264986 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.59 | 42.0 | 3.68e-01 | 76.8% | 80.9% |
| 3782633 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.59 | 43.0 | 3.50e-01 | 78.3% | 78.5% |
| 3216382 | 220.1.1.61 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 | 0.59 | 42.0 | 3.56e-01 | 75.4% | 69.6% |
| 4444916 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 42.0 | 2.67e-01 | 78.3% | 22.3% |
| 3742045 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.58 | 42.0 | 3.50e-01 | 78.3% | 71.5% |
| 3796176 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.58 | 42.0 | 3.34e-01 | 78.3% | 63.3% |
| 4026653 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.58 | 42.0 | 3.65e-01 | 78.3% | 80.0% |
| 3482507 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.58 | 47.0 | 2.97e-01 | 97.1% | 98.7% |
| 3777040 | 220.1.1.120 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GARIL_Rab2_bd | 0.58 | 41.0 | 3.25e-01 | 76.8% | 78.7% |
| 3821886 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.57 | 37.0 | 3.61e-01 | 100.0% | 60.0% |
| 4097208 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.57 | 40.0 | 4.08e-01 | 76.8% | 98.6% |
| 3562817 | 220.1.1.120 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GARIL_Rab2_bd | 0.57 | 41.0 | 3.20e-01 | 76.8% | 88.1% |
| 4303134 | 220.1.1.191 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28624 | 0.57 | 40.0 | 3.12e-01 | 73.9% | 67.7% |
| 5043349 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 47.0 | 3.82e-01 | 95.7% | 79.3% |
| 3591998 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.57 | 40.0 | 3.50e-01 | 75.4% | 79.1% |
| 3796013 | 220.1.1.176 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7778 | 0.57 | 40.0 | 3.32e-01 | 75.4% | 69.2% |
| 3894778 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.57 | 41.0 | 3.58e-01 | 78.3% | 53.6% |
| 3539273 | 220.1.1.120 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GARIL_Rab2_bd | 0.57 | 42.0 | 3.33e-01 | 79.7% | 86.9% |
| 4055020 | 222.1.1.25 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › ChapFlgA_N | 0.56 | 40.0 | 3.99e-01 | 78.3% | 93.3% |
| 3741657 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.56 | 41.0 | 3.51e-01 | 78.3% | 80.0% |
| 3931704 | 220.1.1.20 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TFIIH | 0.56 | 40.0 | 3.53e-01 | 76.8% | 73.6% |
| 3929548 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.56 | 40.0 | 3.30e-01 | 78.3% | 69.1% |
| 3174440 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.56 | 40.0 | 3.09e-01 | 76.8% | 48.5% |
| 3983415 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.56 | 40.0 | 3.96e-01 | 78.3% | 94.6% |
| 3916384 | 220.1.1.66 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH | 0.56 | 40.0 | 3.35e-01 | 78.3% | 56.2% |
| 3493167 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 41.0 | 3.24e-01 | 79.7% | 73.3% |
| 4281188 | 223.2.1.36 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Intu_longin_3 | 0.55 | 38.0 | 3.17e-01 | 72.5% | 87.2% |
| 3613178 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.55 | 39.0 | 3.27e-01 | 78.3% | 65.9% |
| 3823929 | 220.1.1.163 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046 | 0.55 | 40.0 | 3.42e-01 | 79.7% | 65.0% |
| 3472459 | 220.1.1.165 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_trem | 0.55 | 39.0 | 3.37e-01 | 78.3% | 88.3% |
| 5034756 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.55 | 47.0 | 2.99e-01 | 100.0% | 51.0% |
| 3743404 | 220.1.1.256 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Red1 | 0.55 | 39.0 | 2.51e-01 | 75.4% | 21.1% |
| 4019606 | 220.1.1.63 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NF1 | 0.54 | 38.0 | 3.31e-01 | 75.4% | 74.8% |
| 4295220 | 2003.1.2.109 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2, FAD_binding_3, GGR_cat | 0.54 | 47.0 | 2.97e-01 | 100.0% | 50.1% |
| None | — | 0.54 | 47.0 | 2.97e-01 | 100.0% | 50.1% | |
| 3840359 | 244.2.1.7 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rubredoxin_C | 0.54 | 46.0 | 4.08e-01 | 100.0% | 83.3% |
| 3494650 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 38.0 | 3.13e-01 | 76.8% | 56.4% |
| 3299766 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 45.0 | 3.53e-01 | 98.6% | 89.1% |
| 4099278 | 244.2.1.5 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Reductase_C | 0.54 | 47.0 | 4.42e-01 | 100.0% | 94.1% |
| 4019656 | 220.1.1.211 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7612 | 0.54 | 40.0 | 3.27e-01 | 81.2% | 80.7% |
| 3493625 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 39.0 | 3.23e-01 | 79.7% | 79.3% |
| 2445189 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.54 | 39.0 | 3.30e-01 | 78.3% | 69.4% |
| 3937740 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.54 | 38.0 | 3.23e-01 | 78.3% | 73.1% |
| None | — | 0.53 | 45.0 | 2.91e-01 | 100.0% | 49.9% | |
| 5050109 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.53 | 37.0 | 3.48e-01 | 72.5% | 61.2% |
| 4257104 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.53 | 45.0 | 2.91e-01 | 100.0% | 49.9% |
| 4251848 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 44.0 | 3.65e-01 | 100.0% | 86.9% |
| 3260733 | 220.1.1.158 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 | 0.53 | 37.0 | 3.26e-01 | 75.4% | 79.1% |
| 3488069 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 43.0 | 2.77e-01 | 98.6% | 32.7% |
| 4027723 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.51 | 32.0 | 3.27e-01 | 100.0% | 61.4% |
| 3337228 | 109.3.1.186 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_5 | 0.51 | 37.0 | 2.63e-01 | 79.7% | 40.8% |
| 3222614 | 220.1.1.158 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 | 0.51 | 36.0 | 3.14e-01 | 76.8% | 80.9% |
| 3771498 | 220.1.1.158 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 | 0.51 | 36.0 | 3.04e-01 | 76.8% | 82.3% |
| 3711635 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 39.0 | 3.33e-01 | 87.0% | 70.8% |
| 3765735 | 223.2.1.20 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_1 | 0.50 | 43.0 | 3.28e-01 | 100.0% | 85.6% |
| 4182428 | 220.1.1.191 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF28624 | 0.50 | 39.0 | 3.15e-01 | 88.4% | 65.3% |
D2
medium
residues 61-167
Domain cluster:
rep: S20_GE20_scaffold_13766_prodigal-single.1__X__X__00154__D110-209_271-284
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05136.19 best | Phage_portal_2 | 67.5 | 1.70e-18 | 100.0% | 32.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hbgA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 37.0 | 3.35e-01 | 76.6% | 89.8% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980782 | 4038.1.1.7 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal_2 | 0.93 | 84.0 | 5.69e-01 | 94.4% | 77.3% |
| 5083373 | 4038.1.1.0 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein | 0.79 | 71.0 | 5.10e-01 | 92.5% | 84.6% |
| 3980619 | 4038.1.1.7 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal_2 | 0.78 | 69.0 | 4.75e-01 | 92.5% | 72.5% |
| 5082726 | 4038.1.1.7 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal_2 | 0.74 | 68.0 | 4.88e-01 | 94.4% | 86.5% |
| 1557492 | 4038.1.1.9 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › P23-45_portal_barrel | 0.66 | 49.0 | 4.93e-01 | 78.5% | 77.8% |
| 2979157 | 3937.1.1.2 ↗ | alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin | 0.55 | 35.0 | 3.42e-01 | 88.8% | 55.7% |
| 4937980 | 5067.1.1.4 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL | 0.53 | 47.0 | 3.74e-01 | 99.1% | 65.8% |
| 3739470 | 192.2.1.31 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › PRA1 | 0.51 | 38.0 | 3.50e-01 | 78.5% | 78.6% |
D3
medium
residues 322-374
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05136.19 best | Phage_portal_2 | 47.0 | 2.80e-12 | 96.2% | 13.3% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rm6D04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.74 | 51.0 | 3.31e-01 | 73.6% | 27.5% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.73 | 50.0 | 3.90e-01 | 71.7% | 42.0% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 49.0 | 3.94e-01 | 71.7% | 52.9% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 46.0 | 3.81e-01 | 73.6% | 55.2% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 46.0 | 4.37e-01 | 73.6% | 72.1% |
| 5hayA02 | 1.25.40.440 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain | 0.65 | 51.0 | 4.47e-01 | 84.9% | 78.5% |
| 4u2vA02 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.65 | 43.0 | 3.79e-01 | 71.7% | 46.3% |
| 1rrzA00 | 1.20.970.20 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Glycogen synthesis protein GlgS | 0.54 | 42.0 | 4.03e-01 | 94.3% | 86.4% |
| 1oaiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.52 | 39.0 | 3.77e-01 | 81.1% | 94.9% |
| 7y7oA01 | 3.40.390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" | 0.51 | 39.0 | 2.97e-01 | 88.7% | 48.3% |
| 4fvmA04 | 6.10.10.100 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › | 0.50 | 35.0 | 3.65e-01 | 86.8% | 87.0% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980619 | 4038.1.1.7 ↗ | alpha bundles › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Alpha-helical domain in upper collar protein › Phage_portal_2 | 0.97 | 91.0 | 5.41e-01 | 100.0% | 16.6% |
| 4115486 | 604.3.1.11 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › DUF155 | 0.71 | 49.0 | 3.48e-01 | 73.6% | 28.5% |
| 4537890 | 192.17.1.19 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › GrpE | 0.71 | 48.0 | 4.65e-01 | 71.7% | 65.0% |
| 3206688 | 604.1.1.135 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 | 0.69 | 48.0 | 2.98e-01 | 73.6% | 15.1% |
| 3256262 | 375.10.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › zf-DNA_Pol | 0.67 | 47.0 | 3.93e-01 | 75.5% | 44.2% |
| 3554281 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.66 | 46.0 | 4.60e-01 | 73.6% | 92.7% |
| 4934139 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.55 | 42.0 | 4.02e-01 | 81.1% | 71.7% |
| 4199229 | 2007.2.2.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › Ssu72 | 0.54 | 46.0 | 3.12e-01 | 100.0% | 51.4% |
D4
medium
residues 424-475
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nxcA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 58.0 | 3.99e-01 | 94.2% | 67.8% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 43.0 | 4.04e-01 | 86.5% | 54.7% |
| 6sdkA01 | 1.10.10.2830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.63 | 40.0 | 3.35e-01 | 86.5% | 35.1% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 49.0 | 4.20e-01 | 88.5% | 77.4% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 38.0 | 3.80e-01 | 75.0% | 63.2% |
| 3f0cA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 38.0 | 3.93e-01 | 73.1% | 73.5% |
| 2ibdA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 38.0 | 3.94e-01 | 71.2% | 77.8% |
| 1lliA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 36.0 | 3.09e-01 | 86.5% | 34.8% |
| 7s03A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 35.0 | 3.87e-01 | 94.2% | 100.0% |
| 2p5vA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 35.0 | 3.56e-01 | 100.0% | 76.9% |
| 4eclA01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.50 | 42.0 | 3.13e-01 | 100.0% | 66.2% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.50 | 40.0 | 3.69e-01 | 86.5% | 79.1% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4090141 | 101.1.1.494 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 | 0.71 | 42.0 | 4.04e-01 | 71.2% | 51.7% |
| 4966030 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.69 | 45.0 | 4.39e-01 | 86.5% | 60.3% |
| 3972638 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.69 | 45.0 | 4.18e-01 | 86.5% | 53.8% |
| 3998880 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 42.0 | 3.45e-01 | 86.5% | 35.8% |
| 2330636 | 101.1.1.42 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 | 0.65 | 42.0 | 4.18e-01 | 84.6% | 64.2% |
| 5009653 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 45.0 | 4.25e-01 | 84.6% | 60.0% |
| 4974770 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.64 | 48.0 | 3.46e-01 | 84.6% | 69.4% |
| 1873748 | 101.29.1.0 ↗ | alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like | 0.63 | 39.0 | 4.11e-01 | 71.2% | 72.1% |
| 3282193 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 42.0 | 4.26e-01 | 76.9% | 72.0% |
| 3279743 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.62 | 47.0 | 4.25e-01 | 92.3% | 60.0% |
| 4928836 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.62 | 41.0 | 3.76e-01 | 92.3% | 51.4% |
| 4977346 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 39.0 | 4.02e-01 | 84.6% | 66.0% |
| 2658718 | 101.1.1.251 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_ParB | 0.62 | 38.0 | 4.02e-01 | 73.1% | 71.1% |
| 3735470 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.61 | 46.0 | 4.32e-01 | 92.3% | 64.6% |
| 5024733 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.61 | 41.0 | 3.81e-01 | 92.3% | 55.4% |
| 5060354 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 40.0 | 3.72e-01 | 92.3% | 53.8% |
| 4980944 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 39.0 | 3.45e-01 | 92.3% | 43.8% |
| 5077607 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.60 | 39.0 | 3.74e-01 | 92.3% | 58.3% |
| 5058496 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.59 | 40.0 | 3.62e-01 | 92.3% | 51.4% |
| 4926890 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.59 | 40.0 | 3.36e-01 | 94.2% | 40.0% |
| 5066726 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.59 | 40.0 | 3.83e-01 | 92.3% | 60.0% |
| 4340270 | 101.1.2.5 ↗ | alpha arrays › HTH › HTH › winged helix domain › Crp | 0.59 | 41.0 | 4.37e-01 | 92.3% | 84.4% |
| 5044655 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.59 | 38.0 | 3.93e-01 | 92.3% | 70.0% |
| 3544647 | 101.1.1.24 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N | 0.58 | 37.0 | 3.51e-01 | 71.2% | 52.3% |
| 3964284 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.58 | 41.0 | 3.92e-01 | 100.0% | 65.0% |
| 4404485 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.58 | 41.0 | 3.95e-01 | 92.3% | 65.0% |
| 4978144 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.58 | 39.0 | 3.77e-01 | 92.3% | 61.7% |
| 4541333 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 38.0 | 3.87e-01 | 92.3% | 70.0% |
| 4578719 | 101.1.3.1 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE | 0.57 | 39.0 | 3.73e-01 | 92.3% | 60.3% |
| 4937291 | 101.1.1.371 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 | 0.57 | 40.0 | 4.31e-01 | 100.0% | 86.7% |
| 4931278 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.85e-01 | 98.1% | 69.8% |
| 4947593 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 40.0 | 3.93e-01 | 100.0% | 70.9% |
| 4979451 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 39.0 | 3.63e-01 | 100.0% | 60.0% |
| 3287759 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.55 | 40.0 | 3.73e-01 | 92.3% | 60.0% |
| 4997129 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.54 | 42.0 | 4.31e-01 | 82.7% | 88.0% |
| 4979728 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 38.0 | 3.30e-01 | 100.0% | 45.9% |
| 4155920 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.54 | 40.0 | 3.65e-01 | 84.6% | 84.0% |
| 5074438 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 38.0 | 4.10e-01 | 96.2% | 100.0% |
| 3976541 | 101.1.4.6 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Phage_CII | 0.53 | 41.0 | 3.69e-01 | 86.5% | 61.4% |
| 3982090 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.52 | 38.0 | 3.48e-01 | 100.0% | 57.1% |
| 3589863 | 101.1.2.92 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_11 | 0.52 | 45.0 | 3.81e-01 | 100.0% | 61.1% |
| 3981688 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.52 | 41.0 | 3.84e-01 | 100.0% | 69.2% |